Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft207_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 78 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft207_5a-0001 ID=EsuBft207_5a-0001|Name=EsuBft207_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=789bp|location=Sequence derived from alignment at Scaffold_358:301161..302429- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCGAAGAGCGGCCTCTCAGCTATCGGCCGATAGCGAAGCCGAAGGG
CAGGAGACAGCCAACTGGTGGTGCAGTTGGACGCCCGTCCAAGTCGGACA
AGAGAGCCAAGAACTGCACAGCGGGAAAAGCGGCCTGGACTACGGACACA
TCTGTGCACGAGGTGAAGTCGGAGAAGGGCGAGGTCCGGACCCACTTGCA
GTCAAGGATTGTCCTCATGCTACTCTTCGACCTCCGCAAGGAAGGTTGCT
CTGAGAACGAGGTGGTGTTGCAGGTTGCGCGCACTTTCAAGATCGGCCAC
GACAAGGTCAGACGCATCAACAACCACTGGTGGGATCACCGCCAGTTGTA
CGAGACCACCGCCGCGGGGAGAGGCAAGACGGCAAAGAAGGATGATGGCC
GACGCCGCCTCACCAAAGCACAAGAAGATCAACTTCGCGAGTTCATCAAC
GACGAGCACAAGGCCGGTCGTCAAGTCTTTCGCCGCACGGTGGCAGAATG
GATGCACAGGACTTGCAACATGGAGCAGCCGTCCAACCGTTCGGCAGGAG
GGCTGCTGAGTAGGCTCGGCTTCAAGCGTCGTAGAGGCAGGATCAAAACG
CCGCCGTTAAACGCCGAAAGACTTGCTCGCATTCGTCGGTTTCTTGTTGA
AATGGACATGGCAAAGAGGGCAGAGGATGCTGGGTGACAAGTGATCGTGT
ATATGGATGAGAGTTTTGTCCACCAGGCTCATGGTTCTCCCTATTCTTAC
TTTCCTTCGGACGAGAATGGAGTTGTGCAGGATGGGATT back to topprotein sequence of EsuBft207_5a-0001 >EsuBft207_5 ID=EsuBft207_5|Name=EsuBft207_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=228bp
MLEERPLSYRPIAKPKGRRQPTGGAVGRPSKSDKRAKNCTAGKAAWTTDT
SVHEVKSEKGEVRTHLQSRIVLMLLFDLRKEGCSENEVVLQVARTFKIGH
DKVRRINNHWWDHRQLYETTAAGRGKTAKKDDGRRRLTKAQEDQLREFIN
DEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGFKRRRGRIKT
PPLNAERLARIRRFLVEMDMAKRAEDAG back to topmRNA from alignment at Scaffold_358:301161..302429- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft207_5a-0001 ID=EsuBft207_5a-0001|Name=EsuBft207_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1269bp|location=Sequence derived from alignment at Scaffold_358:301161..302429- (Ectocarpus subulatus male Bft15b)
ATGCTCGAAGAGCGGCCTCTCAGCTATCGGCCGATAGCGAAGCCGAAGGG
CAGGAGACAGCCAACTGGTGGTGCAGTTGGACGCCCGTCCAAGTCGGACA
AGAGAGCCAAGAACTGCACAGCGGGAAAAGCGTGAGCAGCAGGCGGCTGA
GCGCGTCAGCAGCTGCTGCCGCGGCGGAGAAGGTTGCTCAGGGCCTGGAC
TACGGACACATCTGTGCACGAGGTGAAGTCGGAGAAGGGCGAGGTCCGGA
CCCACTTGCAGTCAAGGATTGTCCTCATGCTACTCTTCGACCTCCGCAAG
GAAGGTTGCTCTGAGAACGAGGTGGTGTTGCAGGTCAGTACACAGCAGTG
AAGGTCGGATGGTGCGGCACAGCAGCAGGCCGATGTCGTTTTTATATATT
CATCTTGATCAAAGAGAGGTAACGGTTGGTGTTTGAATGTTTTCTCCGGA
ATATGCGCTTACACCCTATCTTTGCAGCGGTGTACAACAGCAGTATGTTT
CTGTGTGGTAAGTTTGTTTTCGTCGCATGTATGTTGGGCGCGAGCCTGTG
CTGTTCGTTACATGTTTGACTCACCAGTCTACGTCACACAAATAAACAGC
AGGAAAACATTGTACTGCTGTACAGCAGTACTTTACAGCAGACGAGCAGG
CTTGCATGTGCGATGCCTCACTGTACAATGTCCAAGTGAACTGACCTTAT
TCATAAACGATGTTGCAATATTTTCTCTTCTCTGGACCTCTCTATGCTGG
CAGGTTGCGCGCACTTTCAAGATCGGCCACGACAAGGTCAGACGCATCAA
CAACCACTGGTGGGATCACCGCCAGTTGTACGAGACCACCGCCGCGGGGA
GAGGCAAGACGGCAAAGAAGGATGATGGCCGACGCCGCCTCACCAAAGCA
CAAGAAGATCAACTTCGCGAGTTCATCAACGACGAGCACAAGGCCGGTCG
TCAAGTCTTTCGCCGCACGGTGGCAGAATGGATGCACAGGACTTGCAACA
TGGAGCAGCCGTCCAACCGTTCGGCAGGAGGGCTGCTGAGTAGGCTCGGC
TTCAAGCGTCGTAGAGGCAGGATCAAAACGCCGCCGTTAAACGCCGAAAG
ACTTGCTCGCATTCGTCGGTTTCTTGTTGAAATGGACATGGCAAAGAGGG
CAGAGGATGCTGGGTGACAAGTGATCGTGTATATGGATGAGAGTTTTGTC
CACCAGGCTCATGGTTCTCCCTATTCTTACTTTCCTTCGGACGAGAATGG
AGTTGTGCAGGATGGGATT back to topCoding sequence (CDS) from alignment at Scaffold_358:301161..302429- >EsuBft207_5a-0001 ID=EsuBft207_5a-0001|Name=EsuBft207_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=687bp|location=Sequence derived from alignment at Scaffold_358:301161..302429- (Ectocarpus subulatus male Bft15b)
ATGCTCGAAGAGCGGCCTCTCAGCTATCGGCCGATAGCGAAGCCGAAGGG
CAGGAGACAGCCAACTGGTGGTGCAGTTGGACGCCCGTCCAAGTCGGACA
AGAGAGCCAAGAACTGCACAGCGGGAAAAGCGGCCTGGACTACGGACACA
TCTGTGCACGAGGTGAAGTCGGAGAAGGGCGAGGTCCGGACCCACTTGCA
GTCAAGGATTGTCCTCATGCTACTCTTCGACCTCCGCAAGGAAGGTTGCT
CTGAGAACGAGGTGGTGTTGCAGGTTGCGCGCACTTTCAAGATCGGCCAC
GACAAGGTCAGACGCATCAACAACCACTGGTGGGATCACCGCCAGTTGTA
CGAGACCACCGCCGCGGGGAGAGGCAAGACGGCAAAGAAGGATGATGGCC
GACGCCGCCTCACCAAAGCACAAGAAGATCAACTTCGCGAGTTCATCAAC
GACGAGCACAAGGCCGGTCGTCAAGTCTTTCGCCGCACGGTGGCAGAATG
GATGCACAGGACTTGCAACATGGAGCAGCCGTCCAACCGTTCGGCAGGAG
GGCTGCTGAGTAGGCTCGGCTTCAAGCGTCGTAGAGGCAGGATCAAAACG
CCGCCGTTAAACGCCGAAAGACTTGCTCGCATTCGTCGGTTTCTTGTTGA
AATGGACATGGCAAAGAGGGCAGAGGATGCTGGGTGA back to top
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