Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2064_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 268 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2064_6a-0001 ID=EsuBft2064_6a-0001|Name=EsuBft2064_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2688bp|location=Sequence derived from alignment at Scaffold_347:26583..29831+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTACGGCAGCCGTAATTACAGGCTGGAAGTCGGCAATAGTCGTTGGC
ACTACATCTACGTCGATGGGCGGGAATGCACAATGCGGAAGCACTACACC
GGAAGTGGCGGATGGGAAGCTCGAAGATGCACTCGCAGACCAAGGTACAA
CACCGGCAGTGGCACCACCGGCGGACTGGAAGCTCGGACTCGCACTCGAA
CTCGAAGGTACAACACCGGCAGCGACTCCACCGGCGGACTGGAAGCTCGT
ACTCGCAGGTGTGCCCGCTCCTGTGTTTGGTGGGAAAGGGGGGTTCGCAA
CAACAAGGCCTGTCCCAACGCTAGGCGAGGGAGCTTGGGGAGACACACGA
GGGAGGGCATCGGGACCGAGGGTCACAGCACTACCGGTATACGTGGGAGG
CAAGCGAGTGGCCCAGCGTGAACATCCTACATCGGAGTAGGCAAAGGAAA
GCTGGCCATTGAAGAGATGCACGCCATTCTCATCCAACATAATTCTCTGC
CTACGCTGCGTATGGTGGAGAGAAAACAGATTGAATGTGATGCCGGGGAC
TACGTACACGTCCGACATCTGCACGCAAAAATCGGTCTCGCCCGAAGGGC
CGGGCATGTGAAATGCCATGTTGATGCTACCAACACATTGCACGCGCAGA
TAGGCACCATTCCCTACTTGGATGAACTCTTTTCCTGCTGGGATTGGCTT
CATGTCGAACATGTTTTCGCTACTGCTGACAAACGTGTTGCTCGCGCCTC
TGTCGGCCCAAAATTGCTCTCTACCAATCTGCGAAGGGCGACTCTGAACA
GACAAAGCGAAACCACTACCATTCTCACGCGCTACCACATTTGGAAAGAT
CTCGCCTTGTGACACAAAACGTGTCTTGAGGGAGTGAAGATGGCCAGGGG
ATCCGGCTGCGTCGGGAGGAGGCGAATGGTACGGGGCATGGGTCGAGTGC
TGCTGCTGCTGCTGGAACGACGGCGGTGGCGGAGGCTGCGGCGGTGGCTG
CTGCTGCTGCTGGTAGTACGGTGTCGGAGGCGGGTAGTACGGCTGCTGCT
GGTAGCTGTAGTCTTGCGACGGTTGCTGATACTGTGGCTGCTGCTCCCAC
CCCCCATACTCGGTGCCATACGCGGGCCCCCCATGGGGCGCAGCACTATA
CGTTTGACTCACATTTGCATGCCCGTGCGGGGGCCGCCACTGCTGCTGCG
GTGTACGGGGGGGAGCTGGATGTCCGTGATGCTGCTGTCCTCCGTAGCCG
CCGTGAGGTCCGTGCTGGGGCCCACCCCCCCAGCCCCCCCCACTGCGGCT
CGGCTGCTGTGGCGGCGGTCCCCGAGGTTGCTGTTGCTGCTGAGGCCGCT
GCTGGTGTGGGGGCTGTTGCTGTTGTTGGGGCTGAGGCTGTTGCTGAGGC
TGTTGCTGAGGCTGCTGCTGCTTGGGCTGCTGCTTCTTCCGTTGGCGACG
CTGGGTGTAGCACTCGCTGTTGGTGATTGTCGTGATAATCAAATTCCACG
CCGTGATCGCCTTGTCTACCGTCTCAGGCGAGTGCATCCTACGTAAGTCC
TCCATGTCTACTCCTTCTAGCCCAACTGGAATTCTGCGGTCACTCAATAC
CACTTCCCGGACTCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCCCCCCCACGCTATGCTACGAGTATATCGAATAGATCCGGCTTGTACGA
TCCACGATCAGTGGATCGTCGCCGCAATGGATCCGAACCGACTTCAACAA
GCTCTCACCTCTACCAGCCTTTTCACTGCTACCTCTTATGTTTCTCTTCT
CCAAGATATCTCTCCACGCTTCTCCACGCGGATTTTCCTCTCTCGGTGCC
TGAACTCTTCTTCCTCGGAAACCTTCCAGGCCGACTTTTTCGTACAATCT
CCGATCAACTCTATTTGGATCTTCCGCAAAGCAAGCACGTCGACGGGACA
GGCACTACCCTGTGTGTGTCTGTGCACACGTGCCACCACCGCACTCCGGT
CGATGCTGTCTATCCTGTCGTTTCTGTCTCTGCTTCCC back to topprotein sequence of EsuBft2064_6a-0001 >EsuBft2064_6 ID=EsuBft2064_6|Name=EsuBft2064_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=124bp
MGGNAQCGSTTPEVADGKLEDALADQGTTPAVAPPADWKLGLALELEGTT
PAATPPADWKLVLAGVPAPVFGGKGGFATTRPVPTLGEGAWGDTRGRASG
PRVTALPVYVGGKRVAQREHPTSE back to topmRNA from alignment at Scaffold_347:26583..29831+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2064_6a-0001 ID=EsuBft2064_6a-0001|Name=EsuBft2064_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3249bp|location=Sequence derived from alignment at Scaffold_347:26583..29831+ (Ectocarpus subulatus male Bft15b)
ATGCTACGGCAGCCGTAATTACAGGCTGGAAGTCGGCAATAGTCGTTGGC
ACTACATCTACGTCGATGGGCGGGAATGCACAATGCGGAAGCACTACACC
GGAAGTGGCGGATGGGAAGCTCGAAGATGCACTCGCAGACCAAGGTACAA
CACCGGCAGTGGCACCACCGGCGGACTGGAAGCTCGGACTCGCACTCGAA
CTCGAAGGTACAACACCGGCAGCGACTCCACCGGCGGACTGGAAGCTCGT
ACTCGCAGGTGTGCCCGCTCCTGTGTTTGGTGGGAAAGGGGGGTTCGCAA
CAACAAGGCCTGTCCCAACGCTAGGCGAGGGAGCTTGGGGAGACACACGA
GGGAGGGCATCGGGACCGAGGGTCACAGCACTACCGGTATACGTGGGAGG
CAAGCGAGTGGCCCAGCGTGAACATCCTACATCGGAGTAGGCAAAGGAAA
GCTGGCCATTGAAGAGATGCACGCCATTCTCATCCAACATAATTCTCTGC
CTACGCTGCGTATGGTGGAGAGAAAACAGATTGAATGTGATGCCGGGGAC
TACGTACACGTCCGACATCTGCACGCAAAAATCGGTCTCGCCCGAAGGGC
CGGGCATGTGAAATGCCATGTTGATGCTACCAACACATTGCACGCGCAGA
TAGGCACCATTCCCTACTTGGATGAACTCTTTTCCTGCTGGGATTGGCTT
CATGTCGAACATGTTTTCGCTACTGCTGACAAACGTGTTGCTCGCGCCTC
TGTCGGCCCAAAATTGCTCTCTACCAATCTGCGAAGGGCGACTCTGAACA
GACAAAGCGAAACCACTACCATTCTCACGCGCTACCACATTTGGAAAGAT
CTCGCCTTGTGACACAAAACGTGTCTTGAGGGAGTGAAGATGGCCAGGGG
ATCCGGCTGCGTCGGGAGGAGGCGAATGGTACGGGGCATGGGTCGAGTGC
TGCTGCTGCTGCTGGAACGACGGCGGTGGCGGAGGCTGCGGCGGTGGCTG
CTGCTGCTGCTGGTAGTACGGTGTCGGAGGCGGGTAGTACGGCTGCTGCT
GGTAGCTGTAGTCTTGCGACGGTTGCTGATACTGTGGCTGCTGCTCCCAC
CCCCCATACTCGGTGCCATACGCGGGCCCCCCATGGGGCGCAGCACTATA
CGTTTGACTCACATTTGCATGCCCGTGCGGGGGCCGCCACTGCTGCTGCG
GTGTACGGGGGGGAGCTGGATGTCCGTGATGCTGCTGTCCTCCGTAGCCG
CCGTGAGGTCCGTGCTGGGGCCCACCCCCCCAGCCCCCCCCACTGCGGCT
CGGCTGCTGTGGCGGCGGTCCCCGAGGTTGCTGTTGCTGCTGAGGCCGCT
GCTGGTGTGGGGGCTGTTGCTGTTGTTGGGGCTGAGGCTGTTGCTGAGGC
TGTTGCTGAGGCTGCTGCTGCTTGGGCTGCTGCTTCTTCCGTTGGCGACG
CTGGGTGTAGCACTCGCTGTTGGTATGTGACGAGTACGGATGATAGTCGC
AGCGCTTGTCTCCGTCCGCCCTGTTGTTGCTGCTCCGACCGCCTCCACTG
CCGTCCTGACCCCCGCCGTTCCCACTGGACCCATTTTGGACACGTCCATC
GCCCCGGTTCCCACCGGCAGCGACGAAAGCGTGCCCCGCGCCATTCTGCG
GCTCCCCCTCCCGTGCGGTCACCATATCCTGATGGGCATCTTTCACGACC
TTTTCAAGGTGCTGACGGGTTAAATTGGGGGGCGGAAGGGCACGCAGCAT
GGCTTTCTCCATCTTGTACTCTGAAGACAAGTTGTACACAACGTGCAGAT
TGGCATCATCGTCGGGGTACGTGACGCCGTGTGAGGCTAACCTACTGCGC
AAAACAGCAAATCTCCCGAAGTATTCTTGCGGGGTTTCACCCACTCGCAT
TTTGATTGCATGGTATTCTGCAGTCAACCGTGTTTTTTCTGCCCTTGCCT
GGGGTTCGTAGTATGCTAGAAATAGTTTCCAACCCCCACTGGGACTACCA
TCAGCAATAATCTGGGTCAAGACAGGCATGTAGGTGATTGTCGTGATAAT
CAAATTCCACGCCGTGATCGCCTTGTCTACCGTCTCAGGCGAGTGCATCC
TACGTAAGTCCTCCATGTCTACTCCTTCTAGCCCAACTGGAATTCTGCGG
TCACTCAATACCACTTCCCGGACTCCTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCCCCCCCACGCTATGCTACGAGTATATCGAATAGATCC
GGCTTGTACGATCCACGATCAGTGGATCGTCGCCGCAATGGATCCGAACC
GACTTCAACAAGCTCTCACCTCTACCAGCCTTTTCACTGCTACCTCTTAT
GTTTCTCTTCTCCAAGATATCTCTCCACGCTTCTCCACGCGGATTTTCCT
CTCTCGGTGCCTGAACTCTTCTTCCTCGGAAACCTTCCAGGCCGACTTTT
TCGTACAATCTCCGATCAACTCTATTTGGATCTTCCGCAAAGCAAGCACG
TCGACGGGACAGGCACTACCCTGTGTGTGTCTGTGCACACGTGCCACCAC
CGCACTCCGGTCGATGCTGTCTATCCTGTCGTTTCTGTCTCTGCTTCCC back to topCoding sequence (CDS) from alignment at Scaffold_347:26583..29831+ >EsuBft2064_6a-0001 ID=EsuBft2064_6a-0001|Name=EsuBft2064_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=375bp|location=Sequence derived from alignment at Scaffold_347:26583..29831+ (Ectocarpus subulatus male Bft15b)
ATGGGCGGGAATGCACAATGCGGAAGCACTACACCGGAAGTGGCGGATGG
GAAGCTCGAAGATGCACTCGCAGACCAAGGTACAACACCGGCAGTGGCAC
CACCGGCGGACTGGAAGCTCGGACTCGCACTCGAACTCGAAGGTACAACA
CCGGCAGCGACTCCACCGGCGGACTGGAAGCTCGTACTCGCAGGTGTGCC
CGCTCCTGTGTTTGGTGGGAAAGGGGGGTTCGCAACAACAAGGCCTGTCC
CAACGCTAGGCGAGGGAGCTTGGGGAGACACACGAGGGAGGGCATCGGGA
CCGAGGGTCACAGCACTACCGGTATACGTGGGAGGCAAGCGAGTGGCCCA
GCGTGAACATCCTACATCGGAGTAG back to top
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