Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 159749.K0S7H9 |
| ProteomeId | EsuBft2050_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 225 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.59e-17 |
| EggNOG OGs | 2D06V@1|root,2SD1E@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2050_9a-0001 ID=EsuBft2050_9a-0001|Name=EsuBft2050_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2253bp|location=Sequence derived from alignment at Scaffold_376:684..4593- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCCAGCCGCTTACCCGCAGCCACAGACCAGTGGGAGAAGACGTC
CATGCCCGTGTGCTATCCAGAGAAGAACACTGGCAAGTGGCGGTTGTTCC
TCAACTTCACAAAGCGGAAGGGAGACAAGGCGAAAAGACAGCAGAGTTCA
CGGTTTGCTTCTCGAGAGGCAGCGCTTGCCGGCGTCTTGGACTTCAGGAC
AGGCGACGCCGTACAGCCATCGCGGCAAGCTCTACAAGCGCACGATGAGA
GATCCAGCCCCATCCTCAGCAGCTGTGGCGGCAGCGACTGCGCTTCCAGC
AGGCAAGTCGCGCTCTCACAAGTCCTCGGCAAGCTAAACGCCGTGGAGGA
AAGGAAGTTCAAGCGACTGCGGCTGGCCGGTTCGGACGCGACCCGCGCAG
GCTTCACGCTAAAGTCGACGCTTTCCAGGCGCGAGAGGTGTTTGGTGGCC
CGGGTCTGGAGCAAGAGGGAAGGAAAGCTTCGACGGGACTTCGACAAGCG
GGGCTCCTATCTCGGCAACCGGATCTACGAGCTGACATCGCGGAGCGAGA
GCAACGAGCAGCACATTCGGCGTATTGAGGCAGCTATGGCGGAGCAAGAC
CTCGCGAGTCTTCTCGCCCCTCTCCCCCCCTCGCCCATCGAAGGAAATGC
AGACGTGGACGCACGGGCGTGTACCGAGGGCGAGGACAACCAGTACAAGG
AGGAAGTGTCCGCCACCCAAGCAAACCGCTTGTGGTATCAAGGGCACTCG
GCGTTGACGGTGTTGAAGGAGGAGCGGAAGCGCGACCTGCGGCAACTGGA
ACTCACGCAGCAGGCGAAGGCCTTGTCGGATGAGCCGTACACGACGATCC
CAGCGGTGAAGGCAGCAGAGGCCAAACGGTTTGAGCTGTTGAACGAGGCC
TCACGTCGTCCACACCAGTCGTCGCGCTTGCGGATCGCGGCGAGAGTAAA
CTCCGCTGGCTCGCGGGTTTACGCGGCATCGACAATCCTGGGGTGGCTCA
GGGACTTGCGGGGGCACGGTGGTTTCAAGCGAGATTCAAGGGGGGTGCAC
GAGTGGGACTGGATCATGTCGGAAGAGGACCTCAAGGATGAGCTCATCAA
GTGGATGAGGACACAGAAGCGCCTTACGGTGAACCTTCCCGTGTCCATGG
CCACAACCCACTCCTGGATGATCGCGCTGGGGTGCAAGTACGAGCGGGCT
ACGAAGTCTTTCTACACGGACGGCCACGAGAAGAAGGACGTGGTGGTGTA
CCGCGGCAAGTACATCGACGTGAAGCGGAAGCTCGCCCTTCGGCAACCGT
TGTGGGTGCGAGTTCAACGAGACACTCTGTTGCCGGAGGAGCTTCAGCGG
CTTGATGGCATCAAAGGGAAGGTGCGCCACATCGGACAGGACGAGAGTCT
CTATAAGGCGTATGCGCGCGAGGGCAAGGAGTGGGTTGTCCAAGGGGTAC
GCGGGTTACGGAAAAAAACCGAGGGCCCGGGAGAGATGGTGTCTGCCTTT
CAAGATGAGAGGCACGGCTTTGGCTTGCCGTTGACGGACGACGTGCTGCA
GGCGGTGAACGCGCGTCGCAAGGAGAAGGGCAAGGAAGTCCTGACACGAA
GCCCTGGCCTGCGGTTTCTCCAGTACGGGAAGAACAAGGATGGATACTGG
GGATACGACGAGTTCAAGGAACAGATCGAGGACGTCTTGGACGTCTTGGA
CGTCTTTGAACCCGACATGCAAGTGGTGGTTGAGATCGACCACTCGTCGG
GGCACACAAGGCAGCGGGAGGATGGATTGCATGTGGGGAACATGAATGTC
AAGTACGGGGGGAAGCAAAAGGTGTTGCGGGATACAGTCATGACAGAGGG
GTGTTTGGGACCGGAAGAGGCGAAGATGTACCTCTCCAACGGTAAGTGGA
GCACGGAGTTCACCGAGGGGGCAGAGGTCTACGACATGAAGCTCAAGGTT
GGCGACACACAGACCAGCACGTTTGCGGCAGGTTCTCCACCTCCCTTTTA
CGAGTGGGATGCGCCGCGCAAAGATGTGAAGGTCGCGCGCAAGGCTAAGC
GCAAGAGCAAAGCGGGAGCGGGGGTTGGCGCAGGCGATGTGGCGGCTGAT
GGGGCTGGAACAAAGCCTAGGGATAAGATTAAGGAAGGGTACGAAGGGAA
GGCAAAGGGCTCGAAGCAGTACCTGTGGGAATGGGGATGGTGGAAAGACG
GGATGTGGGGATCGCTGACGAGAAAAACATCGAGAAAGTCTTGCAGGCAC
TGA back to topprotein sequence of EsuBft2050_9a-0001 >EsuBft2050_9 ID=EsuBft2050_9|Name=EsuBft2050_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=750bp
MASSRLPAATDQWEKTSMPVCYPEKNTGKWRLFLNFTKRKGDKAKRQQSS
RFASREAALAGVLDFRTGDAVQPSRQALQAHDERSSPILSSCGGSDCASS
RQVALSQVLGKLNAVEERKFKRLRLAGSDATRAGFTLKSTLSRRERCLVA
RVWSKREGKLRRDFDKRGSYLGNRIYELTSRSESNEQHIRRIEAAMAEQD
LASLLAPLPPSPIEGNADVDARACTEGEDNQYKEEVSATQANRLWYQGHS
ALTVLKEERKRDLRQLELTQQAKALSDEPYTTIPAVKAAEAKRFELLNEA
SRRPHQSSRLRIAARVNSAGSRVYAASTILGWLRDLRGHGGFKRDSRGVH
EWDWIMSEEDLKDELIKWMRTQKRLTVNLPVSMATTHSWMIALGCKYERA
TKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLLPEELQR
LDGIKGKVRHIGQDESLYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAF
QDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYW
GYDEFKEQIEDVLDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNV
KYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKV
GDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKRKSKAGAGVGAGDVAAD
GAGTKPRDKIKEGYEGKAKGSKQYLWEWGWWKDGMWGSLTRKTSRKSCRH back to topmRNA from alignment at Scaffold_376:684..4593- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2050_9a-0001 ID=EsuBft2050_9a-0001|Name=EsuBft2050_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3910bp|location=Sequence derived from alignment at Scaffold_376:684..4593- (Ectocarpus subulatus male Bft15b)
ATGGCTTCCAGCCGCTTACCCGCAGCCACAGACCAGTGGGAGAAGACGTC
CATGCCCGTGTGCTATCCAGAGAAGAACACTGGCAAGTGGCGGTTGTTCC
TCAACTTCACAAAGCGGAAGGGAGACAAGGCGAAAAGACAGCAGAGTTCA
CGGTTTGCTTCTCGAGAGGCAGCGCTTGCCGGCGTCTTGGACTTCAGGAC
AGGCGACGCCGTACAGCCATCGCGGCAAGCTCTACAAGCGCACGATGAGA
GATCCAGCCCCATCCTCAGCAGCTGTGGCGGCAGCGACTGCGCTTCCAGC
AGGCAAGTCGTAAATTGGGTACACACACAATCATGTTTCTCAATTTTCAA
ATCGGTGCCGTTCGTAGCAGCAGGCTGCGGACATCGCGAGTGGTCGAAAG
CGCACGCTGCATGCGTACACTACAGCAGGCTTTGCTGCGCGTGGCACTCG
CTCTCGTTGTTGCCTACTGTAAGCAAGGGAGGGGGAGTAACATATTTGGA
AGCTTGCAACGAGTGCCACCTCTTGTGAGAGGTTGCTGGTGTCCAAACCT
TGATTTTTTAAATTTCGCAACGGCTATTATTTTCGTCTTCCACAAACAAA
CCGCGCCGTGCTGTTGCTGCTGCTGCTGCCGCGGCAGCGGCGACGGCGGC
GACGGCGGCCAGTATCTATACGTGAGGGTACTACTTGCAGCTCTCGAAAG
TACTCATTTTCACTACACCGTATCGCGATAATTTTGTTTTTCCCATATGT
AGCATTTTCCATATTTTTCGGTTCAACGTGCACCGGGTGCAAGAAGCTGA
GCTGACACAACACTCACGTACAAGACTGCGCGTGTCATGTGCTGGCTTGC
CGGTCCCGATGTTGTACTCACCGGTGCTACAAGCGCTGTTTGAACGCACC
ATTCACACCTTTATGCACTCTTCAACTGCTGTCTATTTAAACCTCTATGC
CTACTGCTATGCGGGCGCAGCTCCCAGTGGGGCCTTACAGATGCTCGTCA
CAAGTGTAATCAGTCGACCAAATTTCCACATGCACGTGCTTCGCGATCAT
CACATATTGACAGTACTGGACCCAGGCAACACTACAGCAGGAGTTATCGT
TTGTTTTAGTAATTCATCCTTGTGTATTCTCTGCATATACTGCTGCCGTG
ATGCATTGCTGCGGGCCGATCACACTCCCTGCACGAATACAAAGCCCCTG
TAGGCGCTCTCACAAGTGTAATCAGTCGACCAAATTTCCACATGCACGTG
GGTCGCCATCATCACATATTGACAGTACCGGACCCAGGCGATACTACAGC
AGTAGATATGGTTTTGTTTTAGTTCTTTATCTTCGTGTGCGTTCTGCATA
TACTCTGCTGCAGTGGTGCCCTGCTGCGGGCCAAAAACACTCCCTGCACG
AATACAACTACAGTCGACATCTGTGCTCGCGATCCCCTTCAACTGATCCA
AACATCCATGCACCTGCGCCGCATGTTACTTCATCTGCCTTTTCCTTAAA
AAAATTACCGGCTGTACTGCCGATACATACATCAACATATACCGGGAGCG
GGATCAGATAGGGCTCGCTGTGCTTTGCAGTGATCTTTTCCTGTCAAACT
TCGCTGCTGCTGTCGTATGAAAATGTTTCACACGAGCTGACACCCCACCC
GAAATCCCAATTTCACACAGGAAAATCGCGCAACAGCCTCGGCAAGCTAA
ACGCCGTGGAGGAAAGGAAGTTCAAGCGACTGCGGCTGGCCGGTTCGGAC
GCGACCCGCGCAGGCTTCACGCTAAAGTCGACGCTTTCCAGGCGCGAGAG
GTGTTTGGTGGCCCGGGTCTGGAGCAAGAGGGAAGGAAAGCTTCGACGGG
ACTTCGACAAGCGGGGCTCCTATCTCGGCAACCGGATCTACGAGCTGACA
TCGCGGAGCGAGAGCAACGAGCAGCACATTCGGCGTATTGAGGCAGCTAT
GGCGGAGCAAGACCTCGCGAGTCTTCTCGCCCCTCTCCCCCCCTCGCCCA
TCGAAGGAAATGCAGACGTGGACGCACGGGCGTGTACCGAGGGCGAGGAC
AACCAGTACAAGGAGGAAGTGTCCGCCACCCAAGCAAACCGCTTGTGGTA
TCAAGGGCACTCGGCGTTGACGGTGTTGAAGGAGGAGCGGAAGCGCGACC
TGCGGCAACTGGAACTCACGCAGCAGGCGAAGGCCTTGTCGGATGAGCCG
TACACGACGATCCCAGCGGTGAAGGCAGCAGAGGCCAAACGGTTTGAGCT
GTTGAACGAGGCCTCACGTCGTCCACACCAGTCGTCGCGCTTGCGGATCG
CGGCGAGAGTAAACTCCGCTGGCTCGCGGGTTTACGCGGCATCGACAATC
CTGGGGTGGCTCAGGGACTTGCGGGGGCACGGTGGTTTCAAGCGAGATTC
AAGGGGGGTGCACGAGTGGGACTGGATCATGTCGGAAGAGGACCTCAAGG
ATGAGCTCATCAAGTGGATGAGGACACAGAAGCGCCTTACGGTGAAGGAC
GTCCAGAACTACATCAACTAGTGGCGCTTCGCGAACGAGATCGGGGATTT
ATCCAGACTCCTTTCGTACCAGGTGAACCTTCCCGTGTCCATGGCCACAA
CCCACTCCTGGATGATCGCGCTGGGGTGCAAGTACGAGCGGGCTACGAAG
TCTTTCTACACGGACGGCCACGAGAAGAAGGACGTGGTGGTGTACCGCGG
CAAGTACATCGACGTGAAGCGGAAGCTCGCCCTTCGGCAACCGTTGTGGG
TGCGAGTTCAACGAGACACTCTGTTGCCGGAGGAGCTTCAGCGGCTTGAT
GGCATCAAAGGGTCCGACGGAGGATTTCGGCGCAGAGGTTTACGATTGCG
TGGTAGAGGGGCGCGAGTGCATCGAGTTCTAGGTCGATCTCCTGCGGGAC
AACTGCTCCGCCGATCGATTCGATGCTCTCCGTGCTGAACGTGGACCGGA
AGGCGGGCACTACAGCGTCCGCTTCGAAGAAGCTGCTGCTCTTCCATGCG
AGAATGCAAGTGCAAATGCAACAGGAAGGTGCGCCACATCGGACAGGACG
AGAGTCTCTATAAGGCGTATGCGCGCGAGGGCAAGGAGTGGGTTGTCCAA
GGGGTACGCGGGTTACGGAAAAAAACCGAGGGCCCGGGAGAGATGGTGTC
TGCCTTTCAAGATGAGAGGCACGGCTTTGGCTTGCCGTTGACGGACGACG
TGCTGCAGGCGGTGAACGCGCGTCGCAAGGAGAAGGGCAAGGAAGTCCTG
ACACGAAGCCCTGGCCTGCGGTTTCTCCAGTACGGGAAGAACAAGGATGG
ATACTGGGGATACGACGAGTTCAAGGAACAGATCGAGGACGTCTTGGACG
TCTTGGACGTCTTTGAACCCGACATGCAAGTGGTGGTTGAGATCGACCAC
TCGTCGGGGCACACAAGGCAGCGGGAGGATGGATTGCATGTGGGGAACAT
GAATGTCAAGTACGGGGGGAAGCAAAAGGTGTTGCGGGATACAGTCATGA
CAGAGGGGTGTTTGGGACCGGAAGAGGCGAAGATGTACCTCTCCAACGGT
AAGTGGAGCACGGAGTTCACCGAGGGGGCAGAGGTCTACGACATGAAGCT
CAAGGTTGGCGACACACAGACCAGCACGTTTGCGGCAGGTTCTCCACCTC
CCTTTTACGAGTGGGATGCGCCGCGCAAAGATGTGAAGGTCGCGCGCAAG
GCTAAGCGCAAGAGCAAAGCGGGAGCGGGGGTTGGCGCAGGCGATGTGGC
GGCTGATGGGGCTGGAACAAAGCCTAGGGATAAGATTAAGGAAGGGTACG
AAGGGAAGGCAAAGGGCTCGAAGCAGTACCTGTGGGAATGGGGATGGTGG
AAAGACGGGATGTGGGGATCGCTGACGAGAAAAACATCGAGAAAGTCTTG
CAGGCACTGA back to topCoding sequence (CDS) from alignment at Scaffold_376:684..4593- >EsuBft2050_9a-0001 ID=EsuBft2050_9a-0001|Name=EsuBft2050_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2253bp|location=Sequence derived from alignment at Scaffold_376:684..4593- (Ectocarpus subulatus male Bft15b)
ATGGCTTCCAGCCGCTTACCCGCAGCCACAGACCAGTGGGAGAAGACGTC
CATGCCCGTGTGCTATCCAGAGAAGAACACTGGCAAGTGGCGGTTGTTCC
TCAACTTCACAAAGCGGAAGGGAGACAAGGCGAAAAGACAGCAGAGTTCA
CGGTTTGCTTCTCGAGAGGCAGCGCTTGCCGGCGTCTTGGACTTCAGGAC
AGGCGACGCCGTACAGCCATCGCGGCAAGCTCTACAAGCGCACGATGAGA
GATCCAGCCCCATCCTCAGCAGCTGTGGCGGCAGCGACTGCGCTTCCAGC
AGGCAAGTCGCGCTCTCACAAGTCCTCGGCAAGCTAAACGCCGTGGAGGA
AAGGAAGTTCAAGCGACTGCGGCTGGCCGGTTCGGACGCGACCCGCGCAG
GCTTCACGCTAAAGTCGACGCTTTCCAGGCGCGAGAGGTGTTTGGTGGCC
CGGGTCTGGAGCAAGAGGGAAGGAAAGCTTCGACGGGACTTCGACAAGCG
GGGCTCCTATCTCGGCAACCGGATCTACGAGCTGACATCGCGGAGCGAGA
GCAACGAGCAGCACATTCGGCGTATTGAGGCAGCTATGGCGGAGCAAGAC
CTCGCGAGTCTTCTCGCCCCTCTCCCCCCCTCGCCCATCGAAGGAAATGC
AGACGTGGACGCACGGGCGTGTACCGAGGGCGAGGACAACCAGTACAAGG
AGGAAGTGTCCGCCACCCAAGCAAACCGCTTGTGGTATCAAGGGCACTCG
GCGTTGACGGTGTTGAAGGAGGAGCGGAAGCGCGACCTGCGGCAACTGGA
ACTCACGCAGCAGGCGAAGGCCTTGTCGGATGAGCCGTACACGACGATCC
CAGCGGTGAAGGCAGCAGAGGCCAAACGGTTTGAGCTGTTGAACGAGGCC
TCACGTCGTCCACACCAGTCGTCGCGCTTGCGGATCGCGGCGAGAGTAAA
CTCCGCTGGCTCGCGGGTTTACGCGGCATCGACAATCCTGGGGTGGCTCA
GGGACTTGCGGGGGCACGGTGGTTTCAAGCGAGATTCAAGGGGGGTGCAC
GAGTGGGACTGGATCATGTCGGAAGAGGACCTCAAGGATGAGCTCATCAA
GTGGATGAGGACACAGAAGCGCCTTACGGTGAACCTTCCCGTGTCCATGG
CCACAACCCACTCCTGGATGATCGCGCTGGGGTGCAAGTACGAGCGGGCT
ACGAAGTCTTTCTACACGGACGGCCACGAGAAGAAGGACGTGGTGGTGTA
CCGCGGCAAGTACATCGACGTGAAGCGGAAGCTCGCCCTTCGGCAACCGT
TGTGGGTGCGAGTTCAACGAGACACTCTGTTGCCGGAGGAGCTTCAGCGG
CTTGATGGCATCAAAGGGAAGGTGCGCCACATCGGACAGGACGAGAGTCT
CTATAAGGCGTATGCGCGCGAGGGCAAGGAGTGGGTTGTCCAAGGGGTAC
GCGGGTTACGGAAAAAAACCGAGGGCCCGGGAGAGATGGTGTCTGCCTTT
CAAGATGAGAGGCACGGCTTTGGCTTGCCGTTGACGGACGACGTGCTGCA
GGCGGTGAACGCGCGTCGCAAGGAGAAGGGCAAGGAAGTCCTGACACGAA
GCCCTGGCCTGCGGTTTCTCCAGTACGGGAAGAACAAGGATGGATACTGG
GGATACGACGAGTTCAAGGAACAGATCGAGGACGTCTTGGACGTCTTGGA
CGTCTTTGAACCCGACATGCAAGTGGTGGTTGAGATCGACCACTCGTCGG
GGCACACAAGGCAGCGGGAGGATGGATTGCATGTGGGGAACATGAATGTC
AAGTACGGGGGGAAGCAAAAGGTGTTGCGGGATACAGTCATGACAGAGGG
GTGTTTGGGACCGGAAGAGGCGAAGATGTACCTCTCCAACGGTAAGTGGA
GCACGGAGTTCACCGAGGGGGCAGAGGTCTACGACATGAAGCTCAAGGTT
GGCGACACACAGACCAGCACGTTTGCGGCAGGTTCTCCACCTCCCTTTTA
CGAGTGGGATGCGCCGCGCAAAGATGTGAAGGTCGCGCGCAAGGCTAAGC
GCAAGAGCAAAGCGGGAGCGGGGGTTGGCGCAGGCGATGTGGCGGCTGAT
GGGGCTGGAACAAAGCCTAGGGATAAGATTAAGGAAGGGTACGAAGGGAA
GGCAAAGGGCTCGAAGCAGTACCTGTGGGAATGGGGATGGTGGAAAGACG
GGATGTGGGGATCGCTGACGAGAAAAACATCGAGAAAGTCTTGCAGGCAC
TGA back to top
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