Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2009_3 |
| Protein domains | PTHR23272 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 163 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2009_3a-0001 ID=EsuBft2009_3a-0001|Name=EsuBft2009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1632bp|location=Sequence derived from alignment at Scaffold_265:205091..207704- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCACGGAAGATGGACAAGAAGCAAAGGGACTTGGCCGACCTCCGCTA
CGTGATCTGGTGCTGCATCAACCTGCGGCCGCAGCAGATGCGGTACGACG
ATGGCTTCAAGCTTTTCGTTGGTGTTTTGTCACCCCAGTACGTAGACACC
ACGATGGCCTCCACTACCTTCAACAAGGTGTTGGACGCCCTGTACGACAG
GGTGAAGCAAGCCATCATGGACGACTTGCGGTTGTTGCGCGAGGAGTTTC
TGGGCATGGGGTATGGTGGAGCTTTCCTTGGTGCCCATCTAGATCTCACG
ACTGTGGCCAACGAGGAGTACATCACTTTCACCGTCTCGTACGTCAAGAA
GGGTAAAACGGATGATGTTACCCGTGTCGCGCTTGCGACGAGAGCGTTTC
CCGGCAGCCATACCGCCGAGGACATCAAACCCTGGATCGAAGCGCTCACG
CTGGAGTACTTTAAGGACTTGATCGGGCCGTCGGTCCAGCCCCACGACGT
CTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATCGTGAACGCGTATA
CGGCGTTGGGGGTTCCAGTCGTCGAGTGCAACTGCCACCGCGTCAATTCC
GCCGTCCTGTGGGCCCTGGGTATTGCGGGTTGTGCGAGGACTTGCAAGAA
CAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCGTCGGTCGGCGTCT
TCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGAAATCCAGCGGCTG
GAGGCGGATCTGCATCGCGTCTACGAGTGGACTAGCCAGTTCAGGATGAT
GGTTCGCCTTCTGATCTTGAATAAGGCGATCAACGAGTACTTCCGGCGAC
TTGCCCAGCAGAACCCCCAGCACAAACAGCTGAAACGCAAGTTGACTGCC
CACGAGTGGACCGTCACAAACGAGGTGTGCAGCCTCCTGGACACCGTCTC
CGAGGCCACGATCCGCATGCAAGGCGCCGCCGACACCCACATCAGCCAGG
CGACGTTCATCGTTCACGAGGTGATGGAGATGTTGAAGGAGGACTCTCAC
CCAATCCGAGTGGAGAACGCCATGGTCACGCCGCCCCCACAGGCACCGGG
CCTCATCCTCGCCGAGGAGGAGGAGCAGCAGCACCAGGCCTCTCTGGTCG
ATATCTCCACGGAGGACACCCAGGCTGGCGTTACGGGTCGGCGCGTCTTG
ATCGAGCGAGAGATGTTGGTGTACTTGGCGGAGCAACCGCAGCTCGACGT
CGATGGCTTCAACCTTATTGGATTTTGGAACCGGCGAGGCACTGACAGCG
TGCGCGCGGCGACTGGGCAGGTCACGTCTCCGGCGGACATGCCGTACCTG
GCGTTTATCGCTCGGTTGCACCTTGGGATCGAGGCCACCAGCTGCCAGGC
CGAGCGCAATTTTTCAGCGCTAGCTCACCTCATCGGTAACCTTCGCTGCA
ACATGCTTCCGCACAGGGTCGAGCGCATGATGCTCATCCGGCTCAACAGG
CGCATGCTCGACGAGGTTCGCGCGTTCGACGCTGCTGTATCGCGGGCACG
AGAAATGGCCACCAAGAATGCCGCGAAGTCCGCGGCTGCGCAGGAGGAGA
GAGCAAACAAGCCGATCGATATCTCCCTCTAG back to topprotein sequence of EsuBft2009_3a-0001 >EsuBft2009_3 ID=EsuBft2009_3|Name=EsuBft2009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=543bp
MSRKMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDT
TMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLT
TVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALT
LEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNS
AVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRL
EADLHRVYEWTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTA
HEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSH
PIRVENAMVTPPPQAPGLILAEEEEQQHQASLVDISTEDTQAGVTGRRVL
IEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYL
AFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNR
RMLDEVRAFDAAVSRAREMATKNAAKSAAAQEERANKPIDISL back to topmRNA from alignment at Scaffold_265:205091..207704- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2009_3a-0001 ID=EsuBft2009_3a-0001|Name=EsuBft2009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2614bp|location=Sequence derived from alignment at Scaffold_265:205091..207704- (Ectocarpus subulatus male Bft15b)
ATGTCACGGAAGATGGACAAGAAGCAAAGGGACTTGGCCGACCTCCGCTA
CGTGATCTGGTGCTGCATCAACCTGCGGCCGCAGCAGATGCGGTACGACG
ATGGCTTCAAGCTTTTCGTTGGTGTTTTGTCACCCCAGTACGTAGACACC
ACGATGGCCTCCACTACCTTCAACAAGGTGTTGGACGCCCTGTACGACAG
GGTGAAGCAAGCCATCATGGACGACTTGCGGTTGTTGCGCGAGGAGTTTC
TGGGCATGGGGTATGGTGGAGCTTTCCTTGGTGCCCATCTAGATCTCACG
ACTGTGGCCAACGAGGAGTACATCACTTTCACCGTCTCGTACGTCAAGAA
GGGTAAAACGGATGATGTTACCCGTGTCGCGCTTGCGACGAGAGCGTTTC
CCGGCAGCCATACCGCCGAGGACATCAAACCCTGGATCGAAGCGGTAGAA
ATAGAATTTAGATTCAAACAGATCTTTTCTGAACTTTTGTTTTTGTATCG
GACTACTATCCTTTTCCAGCTGGTTTTCGGTGGACAACAACGAATTGAAT
ACTCACGAATACTATTTTGAAAAAAACAGAAAAAACGTAAAACTAATATG
AATATTTAATCTTGGTCTCTGTTACCTTCCTTCCGTTATCGAACGACTGA
AATAAACAGCTCACGCTGGAGTACTTTAAGGACTTGATCGGGCCGTCGGT
CCAGCCCCACGACGTCTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACA
TCGTGAACGCGTATACGGCGTTGGGGGTTCCAGTCGTCGAGTGCAACTGC
CACCGCGTCAATTCCGCCGTCCTGTGGGCCCTGGGTATTGCGGGTTGTGC
GAGGACTTGCAAGAACAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAG
CGTCGGTCGGCGTCTTCAGCCACTCCGCTGTCAACAACGACATGCTGAAG
GAAATCCAGCGGCTGGAGGCGGATCTGCATCGCGTCTACGAGTTCATCCG
GCGAAACGACACCAGGCGTGTTGATGGGAATGTTTTCTTAGGTTTGTTTT
CGTTGTTCAGCGCTGATCCTTATTTTTTAATTTGTACTCTGTACTCTGTT
TTTTTTGTTCCTTACGACCCGGTTTTCTGGCAACGTTGAATCAGTGCGTG
CAATCAATTTCTCAATTTCGTTGTTGAGTACAACTTGAACGTTTTTGCCT
CAGGACAACCAAAATGCAAACGAAAAACACCAACACAAACGCGGACTCCT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCC
CCCACTCCCCCCCTCCCAACAGGTGGACTAGCCAGTTCAGGATGATGGTT
CGCCTTCTGATCTTGAATAAGGCGATCAACGAGTACTTCCGGCGACTTGC
CCAGCAGAACCCCCAGCACAAACAGCTGAAACGCAAGTTGACTGCCCACG
AGTGGACCGTCACAAACGAGGTGTGCAGCCTCCTGGACACCGTCTCCGAG
GCCACGATCCGCATGCAAGGCGCCGCCGACACCCACATCAGCCAGGCGAC
GTTCATCGTTCACGAGGTGATGGAGATGTTGAAGGAGGACTCTCACCCAA
TCCGAGTGGAGAACGCCATGGTCACGCCGCCCCCACAGGCACCGGGCCTC
ATCCTCGCCGAGGAGGAGGAGCAGCAGCACCAGGCCTCTCTGGTCGATAT
CTCCACGGAGGACACCCAGGTGACTGACCTCACCCAAGAAGCACAGGACG
TGGTCCAAGTTATGCTGGAGGTGTTGGAAGAGAAGGGAGTGGGGAAGGCG
CTGCAGAGGGTGGAGTGAATTGTCCGTGCTGCTGGATCCGAGGCGGAAAG
GTTGCGACCCCGACCAAGTCGGGAACGGCTCTTCGGCCCTGAAGGCACCA
GCCGAAGCGGACTTGAAGGCATTCATCGGCCACTTCGCGGAGGGGTTCGA
CACGGTCACGCCGGCGCCGGCACCAGCGGCGGCCAACGTCGACACCACGG
AACCTGCTCGCAAGAAGAGGGAGCCTAATTCAAGATTGGACGAGCGGCGC
GCTGCACGTGTGGCGGGGGCGGCCGGTGCGCGCCAGCGGGACGGCCAATC
CTCAGGCTGGCGTTACGGGTCGGCGCGTCTTGATCGAGCGAGAGATGTTG
GTGTACTTGGCGGAGCAACCGCAGCTCGACGTCGATGGCTTCAACCTTAT
TGGATTTTGGAACCGGCGAGGCACTGACAGCGTGCGCGCGGCGACTGGGC
AGGTCACGTCTCCGGCGGACATGCCGTACCTGGCGTTTATCGCTCGGTTG
CACCTTGGGATCGAGGCCACCAGCTGCCAGGCCGAGCGCAATTTTTCAGC
GCTAGCTCACCTCATCGGTAACCTTCGCTGCAACATGCTTCCGCACAGGG
TCGAGCGCATGATGCTCATCCGGCTCAACAGGCGCATGCTCGACGAGGTT
CGCGCGTTCGACGCTGCTGTATCGCGGGCACGAGAAATGGCCACCAAGAA
TGCCGCGAAGTCCGCGGCTGCGCAGGAGGAGAGAGCAAACAAGCCGATCG
ATATCTCCCTCTAG back to topCoding sequence (CDS) from alignment at Scaffold_265:205091..207704- >EsuBft2009_3a-0001 ID=EsuBft2009_3a-0001|Name=EsuBft2009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1632bp|location=Sequence derived from alignment at Scaffold_265:205091..207704- (Ectocarpus subulatus male Bft15b)
ATGTCACGGAAGATGGACAAGAAGCAAAGGGACTTGGCCGACCTCCGCTA
CGTGATCTGGTGCTGCATCAACCTGCGGCCGCAGCAGATGCGGTACGACG
ATGGCTTCAAGCTTTTCGTTGGTGTTTTGTCACCCCAGTACGTAGACACC
ACGATGGCCTCCACTACCTTCAACAAGGTGTTGGACGCCCTGTACGACAG
GGTGAAGCAAGCCATCATGGACGACTTGCGGTTGTTGCGCGAGGAGTTTC
TGGGCATGGGGTATGGTGGAGCTTTCCTTGGTGCCCATCTAGATCTCACG
ACTGTGGCCAACGAGGAGTACATCACTTTCACCGTCTCGTACGTCAAGAA
GGGTAAAACGGATGATGTTACCCGTGTCGCGCTTGCGACGAGAGCGTTTC
CCGGCAGCCATACCGCCGAGGACATCAAACCCTGGATCGAAGCGCTCACG
CTGGAGTACTTTAAGGACTTGATCGGGCCGTCGGTCCAGCCCCACGACGT
CTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATCGTGAACGCGTATA
CGGCGTTGGGGGTTCCAGTCGTCGAGTGCAACTGCCACCGCGTCAATTCC
GCCGTCCTGTGGGCCCTGGGTATTGCGGGTTGTGCGAGGACTTGCAAGAA
CAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCGTCGGTCGGCGTCT
TCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGAAATCCAGCGGCTG
GAGGCGGATCTGCATCGCGTCTACGAGTGGACTAGCCAGTTCAGGATGAT
GGTTCGCCTTCTGATCTTGAATAAGGCGATCAACGAGTACTTCCGGCGAC
TTGCCCAGCAGAACCCCCAGCACAAACAGCTGAAACGCAAGTTGACTGCC
CACGAGTGGACCGTCACAAACGAGGTGTGCAGCCTCCTGGACACCGTCTC
CGAGGCCACGATCCGCATGCAAGGCGCCGCCGACACCCACATCAGCCAGG
CGACGTTCATCGTTCACGAGGTGATGGAGATGTTGAAGGAGGACTCTCAC
CCAATCCGAGTGGAGAACGCCATGGTCACGCCGCCCCCACAGGCACCGGG
CCTCATCCTCGCCGAGGAGGAGGAGCAGCAGCACCAGGCCTCTCTGGTCG
ATATCTCCACGGAGGACACCCAGGCTGGCGTTACGGGTCGGCGCGTCTTG
ATCGAGCGAGAGATGTTGGTGTACTTGGCGGAGCAACCGCAGCTCGACGT
CGATGGCTTCAACCTTATTGGATTTTGGAACCGGCGAGGCACTGACAGCG
TGCGCGCGGCGACTGGGCAGGTCACGTCTCCGGCGGACATGCCGTACCTG
GCGTTTATCGCTCGGTTGCACCTTGGGATCGAGGCCACCAGCTGCCAGGC
CGAGCGCAATTTTTCAGCGCTAGCTCACCTCATCGGTAACCTTCGCTGCA
ACATGCTTCCGCACAGGGTCGAGCGCATGATGCTCATCCGGCTCAACAGG
CGCATGCTCGACGAGGTTCGCGCGTTCGACGCTGCTGTATCGCGGGCACG
AGAAATGGCCACCAAGAATGCCGCGAAGTCCGCGGCTGCGCAGGAGGAGA
GAGCAAACAAGCCGATCGATATCTCCCTCTAG back to top
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