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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LFK9 |
| ProteomeId | EsuBft199_12 |
| Protein domains | IPR027124 |
| Protein domains | IPR011421 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | craniofacial development protein 1 os:bos taurus gn:cfdp1 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1779 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.84e-146 |
| EggNOG OGs | KOG4776@1|root,KOG4776@2759|Eukaryota |
| Ec32 ortholog description | BCNT-C domain |
| Ec32 ortholog | Ec-04_001830.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | CFDP1 |
| KEGG ko | ko:K14537 |
| KEGG Pathway | ko03008,map03008 |
| GOs | GO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000812,GO:0000819,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006323,GO:0006325,GO:0006338,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007155,GO:0008092,GO:0008150,GO:0008360,GO:0009987,GO:0010032,GO:0010941,GO:0016043,GO:0019222,GO:0019894,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022610,GO:0030261,GO:0031012,GO:0031056,GO:0031060,GO:0031323,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032991,GO:0033043,GO:0033044,GO:0034728,GO:0035065,GO:0042127,GO:0042981,GO:0043044,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051171,GO:0051246,GO:0051276,GO:0051321,GO:0051569,GO:0051570,GO:0060255,GO:0060548,GO:0062023,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070603,GO:0071103,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098813,GO:0140014,GO:1901983,GO:1902275,GO:1902494,GO:1903046,GO:1903047,GO:1904949,GO:2000269,GO:2000270,GO:2000615,GO:2000756 |
| Description | chromosome organization |
| COG category | K |
| BRITE | ko00000,ko00001,ko03009 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0050794 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft199_12a-0001 ID=EsuBft199_12a-0001|Name=EsuBft199_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1779bp|location=Sequence derived from alignment at Scaffold_499:825491..830747- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCGCCTGTACCTCCCTGCTAGGACTGTTTGTCAAAGCTGAGGTGTGTCG GAATTGGTGCCATCCCTTCTTCAGTAGCCATGAGTGGAGAAGCTGTACCC GATTCCGAGGAGGATGATTCCGACTATGTGCAAGACGAAACCGCCGGGGA CGATGAGGAGGAAGACGAGGTAGAGGAGCCGGAAGATACGATGGGGGTGG CCACCAGCGATCGACAGAGGTCAAAGATCGACGATATCTGGGCAAGCATG AACGCGAGCGGGGCTGACGCTACGGCGCCACCGGCGGGGGGATCGGGAAC CCGACTTGCCGAGGGGAAGGGAACGAAGGCTACTAAGAAGAAAAAGAAGG CCAACAAGAAGGCCAACAAGGTTCTTGCCGGGATTTTCGGCAAGAAGGCG GCGTCCGACATAGTGTCGGGGGCCGGCAAGGGCAAGCGGCGAGCGGGGAC TGCGGAAGGAGCCGCGCGAAAGAAGCTGCTCGCGGCCAGCCGGAAGGTGG AGGTGACCGAGGTTAAGAAGTACGCCGGAAAGGACATCGTGGTCAAGCGA AAAGTGGCGGCAGGGTCGGCGGAGCACGTTGCCGCTGCGGGAGCGAAGAA GAAGGGGGGGCTCGATAATGTCCTCGCCGCATTAGACGGGCCAAAGTCGA TATCCACGGTAACGAAATCTTCTATGGATTGGGAGACTTACAAAGCGGCC GAGGGCATCGAGGGAGACATGGAGCAGGCCACGAAGGACGGGAAAGGGTA CCTCAACAAGCAAGACTTCCTGCAGCGGTGCGACGTGCGGAAGTTCGAGA CCGAGCTCGAGGCTCGCCAGTCGAAGCGCGACGCATGACGCATAATCTCA TCATTGTTGGTTGTGATGGCCGGAAGGGGTGTCGAGGTCGAAACAGTCAT GAGAGTGGGTTTTCGAACAGCAGTCTACGCAGGGTTTTCCAAAGTAAGCA AACTTACTGGATACAGTAAGAATCGGCTACATTGGGGTTAGGGTTACGGT CTGCGTGTCCCCTTCCTTGTCTCTTGTAGTAACCTTACTTTCTTTGCGTA GGCAGTCCGGTGGAACCTGCGGTGGGATTGGGGTCGTGCAGGAGGCGAGG TATCCCCACAGGCGTGCATCGCTCCGTTTGGAAAATATAGGGACCACTGG GACAAATACATTTGGTATCCGAACGGTCCTTACCGCACAGAGTGGTGTTG TTAAACGGTCGTTCAGCGCCGGTTTTGACGTGTAGGAGATGTGCGCCACC AGCAAGTTTGTCTCGCTGCCTTAAACTTCGAAGTACCCCTTCGGTTGCGC ACCGTCTTGTTTGTGATTGATGTGTTTCATATGTGCATGTGAACAGCAGT GATCTTCTGGAACGCATCCGTGGGCAGTTGCTTTCGTTCCTATTCTTGTC TGGTGGCTAGCGGTGATTTGTTTTGTCGAGGGTACAGCGGCTGGAGCGCG GTGCGGAGCCGTGCTCATTGATGGTCGTAAATGTTATATCTCGTGCTGAG GAACAGCAGCATGTATCTCCAGCGGTGGGCTGGATTCGCTTCCATACGGT TTTAATGCCGTAACACCCTGTGGTGAATTCAAGCAAAGGCAAAAGACGCC TGGCCGAAAACGCCGGGGGGAGCTCCCTCTTTGCCTCGCTTCACCTTGAG GTTTCCGTTTTTTCGTTTTCTCCGTAGGCTAGGGCAAAACTTTTTATCAT AGTTTAGGACACGTTTTTTTCCGCAGGCTATCGTGGGATATGATACCCGT AACGTGAATGCCGGAAAAGATGAACTCCA back to topprotein sequence of EsuBft199_12a-0001 >EsuBft199_12 ID=EsuBft199_12|Name=EsuBft199_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=252bp
MSGEAVPDSEEDDSDYVQDETAGDDEEEDEVEEPEDTMGVATSDRQRSKI DDIWASMNASGADATAPPAGGSGTRLAEGKGTKATKKKKKANKKANKVLA GIFGKKAASDIVSGAGKGKRRAGTAEGAARKKLLAASRKVEVTEVKKYAG KDIVVKRKVAAGSAEHVAAAGAKKKGGLDNVLAALDGPKSISTVTKSSMD WETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR DA back to topmRNA from alignment at Scaffold_499:825491..830747- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft199_12a-0001 ID=EsuBft199_12a-0001|Name=EsuBft199_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5257bp|location=Sequence derived from alignment at Scaffold_499:825491..830747- (Ectocarpus subulatus male Bft15b) GTCGCCTGTACCTCCCTGCTAGGACTGTTTGTCAAAGCTGAGGTGTGTCG
GAATTGGTGCCATCCCTTCTTCAGTAGCCATGAGTGGAGAAGCTGTACCC
GATTCCGAGGAGGATGATTCCGACTATGTGCAAGGTACGCGGACACTCCT
ATGCTGTGTCCAACGACCTTTTGCCTGGCTTTCCTCGAGTACGAACAACA
CCCCCAGCCGTTTTGTGCCGCTGTGCTGCCATTAGCAAACGTAGCGCACT
CACTAGGATTATCTCTTGGTAAAGTCTGAATTTAATGCCCTTGTGTTGCT
CTGGGAAGCCAAAAGCTGCACTGCTGTCGTGCCTTTTTCATTGGCCCATC
CGATCTAAACGTTGGTACAATACGCACACCAACGTTTCAATCCGAGGGAA
CGGCTGCGAGTCCATATTCAAACACTTGGCTCTACACACAGCAGAACACC
GCAGCAAGCAGTAGCTGACCGCCAGCGTGAGTTGAACAAAGGAATGATGA
GTATTTACAAATTGTTACCACAACCGAGTACCGCTCTTGTAGGAAACAAA
ATGCACCCCATGGCATGTTGGGCACTGCCATGACAACCTTGTACCAAGAG
AACACGCAGACTATAGCACGTCGCAAGTGTGAGATCAAACAAGGACAGAG
GGCGGTACTAGATAGCGAGATCGGAACGGTTTTCTATGTGAAAACAACAG
CAACAGCAACAACACCTGTTTTTCTTTCGGCCCTATGGCGTCTTTCTCCC
GCGTAAAACAATTGTATTGTGTTTTCCTGAGCAGTACCTCTCACGCCGAT
CATTCCAATGCATCCCCTTCGACAAACATGGTAGGGATTGTAGGTTCTTC
GATGTGCCGTTGGTGACGCCTGTGTTGCACCGCTGCACCGCCGTTGCTTG
TCTTCTTGTCCGTGCCGTTTCAGACGAAACCGCCGGGGACGATGAGGAGG
AAGACGAGGTAGAGGAGGTGAGCGGTACTGCTGTAGGTCGCGCGAGGTCA
TGGGCTGCTTGCTGTCCCCGTAGTGTAGCCGAGTAGCGTTTGCTCTCGAA
GTTTTGGGAGTCAGGCGAATGGATGCAGCACGCCTTGCAGCGCCATGTGG
CCCCGTTGGTCGCCTGGGGTGTTGTTGACTGCAGCGTTACAGCGGTATGT
TGGGGGGCTCGCTACGTAGCGTTGAAATTGCTTGGCACTGATCGAAGCGT
ATACAGTACCATCAATTTGTCTCATTCTCTGAATGGTGGCGGGTCCCCGG
TATAGTGCTGTTGGCCTCTGCGGGCACATGCCGGCCCCGTATTTGGCGAG
CCCCCTAAATGTACTGCTGTACCCCAATTTGGCGGTGCAAGCAGAGTTAC
CGTAGAGTCGTGAGCCCACGCCGGGCGGGGTGAAAAGTAATACGGTTTAG
GCGAATGTAGGCTACAGGCCCTCAGCCAACTCGGTCGCCAATGGAATCGT
CCAACGCTACCAGGCTGATTGTGGAAGTGGCCCCGCCAAGCTACATCTGG
CGCCTGCATCCCTTTATCGCTACGCCTCTCCCTTCAGGATGCTCGTATCG
ACTTGTTTTTCTCGTAGCCAGCTCTGGTTACCTCTTGTCCCCCTGGGTAT
ATTCCGAAGGTTCAAACTTGAACACAAGCACAGTATGTGCGCCTTGGTCT
GCGTTATTGTGTACCACGTGTGAACTTATCGTTCACCATCTGCCGAAGCA
CCGACACGTGGAACGCGGCTTAACCCACGCTCGTGCTACATCTAGTCTTG
CTCGTCCTTTCTTTTTCCTCTCTGCCCCGGTGCCGCTGCTTTGAAGGAAA
GACACGAATCAGCAGACTTTTCGATCTTAACGGCAGGCCTTGTAGCGGGG
AGACATGGCACACAACTCTTCAGGATGCATTGCAGATCCTTCAAAATACC
CACAGCTTGCAGATCCTTAGAAGAAAATAGCAGCCCACTGTACGGCCTGG
AAACAACCTCTTAGCTGTCCCCCACCTTGTGCCGTCGCTATCTCCCAGCC
GGAAGATACGATGGGGGTGGCCACCAGCGATCGACAGAGGTCAAAGATCG
ACGATATCTGGGCAAGCATGAACGCGAGCGGGGCTGACGCTACGGCGCCA
CCGGCGGGGGGATCGGGAACCCGACTTGCCGAGGGGAAGGGAACGAAGGC
TACTAAGAAGAAAAAGAAGGCCAACAAGAAGGCCAACAAGGTGATGAAGG
AAGAAAACACCAAGCCATGTTTGACGGTGGTTTGGGGTAGGCGAAAGCCG
ATGAACACACCTGCCGTGTTTGGGGATGGTTTGGAGTGGACGTGGCACCA
AGGCGGTGGATGTGGCACATGGTTTGATGAACCGACAACGGCAAAATGTG
CTGGCTACTTCCGCTGCTACTGCTGCTGCTGCTGCTGCATCTTTGGTTGC
TACTGCTTCAGCTATGGCTTCGGCTTTGTCTGCTACGTTGCTACCTCTCG
CTGATCTACGATTGAGCTGATTTACCTACGACCTTAGCTGCTACTGCCGC
TGCGTTGCTATTCAGAGGTTGTTCTGATCAGCGTCCTCCCATCAACTTCC
CCCTCCTGCCTCTAACTCGCCTCTGCCTCCACTCTACGTCTAGGCTACAA
CACCTCCTCCCCCTAGTTTGTCTATTGGTCGAGTTTTGATGTCGCAACCG
CCACTCGAATACACACACGTCTCACTGAAACCCTCTCGTCTTGTGTTTCG
GAACGCAGGTTCTTGCCGGGATTTTCGGCAAGAAGGCGGCGTCCGACATA
GTGTCGGGGGCCGGCAAGGGCAAGCGGCGAGCGGGGACTGCGGAAGGAGC
CGCGCGAAAGAAGCTGCTCGCGGCCAGCCGGAAGGTGGAGGTGACCGAGG
TTAAGAAGTACGCCGGAAAGGACATCGTGTGAGTGGCTTGTTTGAGTGGT
TTGTTTCGTCGCGAACACGACCTGCTTGCTTTCCCCGCCTCGCTGTTGTC
TTATTTAGTTGGTTTTCCAAGGAAGCAGGAGGGCGTTCATGTTTTCGAGT
GACGGTTCAGTCTGAAACCGTCGTTCCGTGTTGAAGCGTAAGCCGCGGCC
CTCCGAGATTACCGGCATGTCTGCGGCCATTCCCGTTCACTGTCTTATTT
TCAATAATATTAAATAATAGAGAAATGAAATCCCATTGTTAGACCGTCCC
GTTCTTCCTTTTTTTTTTTTCAGCTCTACGCTCTTGTCTTCCGAGATTTG
GAAGGGGCGCACAAGCGAAAATCGCCGTCAGCCTACGCCGTCATTTTTGT
CTTTTATTAGGAGAACGAACGGTTCAGCTAGCCCCTTCCCTGGCTTGCAC
TCACGATCAAGCGCTTTTCCAGTGGTATCGACTAGATGTTGACCGCTTGT
ACCACTCACGAACCCTCTCCGGCACTCGAACCACCGGCCTACAGTACTCG
GTCGCCAGAGCATCTCCAGGCTACCAGCCGGCTGGGTGACCGCTGCTTGA
TGCATTTAGTATTTGTTTTGTACAGGTTAGGGGCGGCGAGTTTCTCGTTG
ACGGAGGAGTAGCGTGGCCGTAGTTGGTAGAATCGCCACTGCGAGGGGCA
CTCATGTCTGGCTGCCGCTGTTGCTGTTGTTTCTCTTGACCGTGGTCATG
ACAGGGTCAAGCGAAAAGTGGCGGCAGGGTCGGCGGAGCACGTTGCCGCT
GCGGGAGCGAAGAAGAAGGGGGGGCTCGATAATGTCCTCGCCGCATTAGA
CGGGCCAAAGTCGATATCCACGGTAGGTATGTGTGCGCGCTGTTCGCGGG
GGGGGAGGGGAGGGTGAGCTACCGCGCCTTTCGCATATGGCAGGCACATT
CAGGGGGGACCGCCTACGCGCAACGTGTCGGCAACCCCTCATTTCTCGTC
TGTTGGCTCCTGCTTTCCTGCCCCCAATGCCTCACGGCGCTTCGCCCTTG
GCGATGTGAAAGCCTGGTCTGGTGAGAACCCGGCGTGCTCCGTCCCGACT
TTGTAGCGATGCTAGGTCAATGGTATAACGACTGTAAGTACCCCCTTCCA
CTCTTTTTCTGCGTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNN
NNNNNNNNNNNNNNNNCCCCCCTCCTTCCCGAAAAGGTAACGAAATCTTC
TATGGATTGGGAGACTTACAAAGCGGCCGAGGGCATCGAGGGAGACATGG
AGCAGGCCACGAAGGACGGGAAAGGGTACCTCAACAAGCAAGACTTCCTG
CAGCGGTGCGACGTGCGGAAGTTCGAGACCGAGCTCGAGGCTCGCCAGTC
GAAGCGCGACGCATGACGCATAATCTCATCATTGTTGGTTGTGATGGCCG
GAAGGGGTGTCGAGGTCGAAACAGTCATGAGAGTGGGTTTTCGAACAGCA
GTCTACGCAGGGTTTTCCAAAGTAAGCAAACTTACTGGATACAGTAAGAA
TCGGCTACATTGGGGTTAGGGTTACGGTCTGCGTGTCCCCTTCCTTGTCT
CTTGTAGTAACCTTACTTTCTTTGCGTAGGCAGTCCGGTGGAACCTGCGG
TGGGATTGGGGTCGTGCAGGAGGCGAGGTATCCCCACAGGCGTGCATCGC
TCCGTTTGGAAAATATAGGGACCACTGGGACAAATACATTTGGTATCCGA
ACGGTCCTTACCGCACAGAGTGGTGTTGTTAAACGGTCGTTCAGCGCCGG
TTTTGACGTGTAGGAGATGTGCGCCACCAGCAAGTTTGTCTCGCTGCCTT
AAACTTCGAAGTACCCCTTCGGTTGCGCACCGTCTTGTTTGTGATTGATG
TGTTTCATATGTGCATGTGAACAGCAGTGATCTTCTGGAACGCATCCGTG
GGCAGTTGCTTTCGTTCCTATTCTTGTCTGGTGGCTAGCGGTGATTTGTT
TTGTCGAGGGTACAGCGGCTGGAGCGCGGTGCGGAGCCGTGCTCATTGAT
GGTCGTAAATGTTATATCTCGTGCTGAGGAACAGCAGCATGTATCTCCAG
CGGTGGGCTGGATTCGCTTCCATACGGTTTTAATGCCGTAACACCCTGTG
GTGAATTCAAGCAAAGGCAAAAGACGCCTGGCCGAAAACGCCGGGGGGAG
CTCCCTCTTTGCCTCGCTTCACCTTGAGGTTTCCGTTTTTTCGTTTTCTC
CGTAGGCTAGGGCAAAACTTTTTATCATAGTTTAGGACACGTTTTTTTCC
GCAGGCTATCGTGGGATATGATACCCGTAACGTGAATGCCGGAAAAGATG
AACTCCA back to topCoding sequence (CDS) from alignment at Scaffold_499:825491..830747- >EsuBft199_12a-0001 ID=EsuBft199_12a-0001|Name=EsuBft199_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=759bp|location=Sequence derived from alignment at Scaffold_499:825491..830747- (Ectocarpus subulatus male Bft15b) ATGAGTGGAGAAGCTGTACCCGATTCCGAGGAGGATGATTCCGACTATGT GCAAGACGAAACCGCCGGGGACGATGAGGAGGAAGACGAGGTAGAGGAGC CGGAAGATACGATGGGGGTGGCCACCAGCGATCGACAGAGGTCAAAGATC GACGATATCTGGGCAAGCATGAACGCGAGCGGGGCTGACGCTACGGCGCC ACCGGCGGGGGGATCGGGAACCCGACTTGCCGAGGGGAAGGGAACGAAGG CTACTAAGAAGAAAAAGAAGGCCAACAAGAAGGCCAACAAGGTTCTTGCC GGGATTTTCGGCAAGAAGGCGGCGTCCGACATAGTGTCGGGGGCCGGCAA GGGCAAGCGGCGAGCGGGGACTGCGGAAGGAGCCGCGCGAAAGAAGCTGC TCGCGGCCAGCCGGAAGGTGGAGGTGACCGAGGTTAAGAAGTACGCCGGA AAGGACATCGTGGTCAAGCGAAAAGTGGCGGCAGGGTCGGCGGAGCACGT TGCCGCTGCGGGAGCGAAGAAGAAGGGGGGGCTCGATAATGTCCTCGCCG CATTAGACGGGCCAAAGTCGATATCCACGGTAACGAAATCTTCTATGGAT TGGGAGACTTACAAAGCGGCCGAGGGCATCGAGGGAGACATGGAGCAGGC CACGAAGGACGGGAAAGGGTACCTCAACAAGCAAGACTTCCTGCAGCGGT GCGACGTGCGGAAGTTCGAGACCGAGCTCGAGGCTCGCCAGTCGAAGCGC GACGCATGA back to top
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