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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LFK6 |
| ProteomeId | EsuBft199_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 239 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.38e-213 |
| EggNOG OGs | 29WS3@1|root,2RXQ6@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft199_10a-0001 ID=EsuBft199_10a-0001|Name=EsuBft199_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2393bp|location=Sequence derived from alignment at Scaffold_499:813921..819421- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCTAGCCTGCTGCACGACGCCGTCTCTGTCGTGTCCCTCCGCGAATCCTG CACAGAAGCTTCTATCCGAGCTCGCCGACACCGCTTTTACCTCCGTAAAC GATGGCACCATCCTCGAAGAAACGCAAAACAGGATCAGCAACGCCGGTGG GCGCGACTGCTGCTGGTGCTGATGGTGCGGGCGCAAAGAGCACGTCGATC GAGTTGCTGGACAAGTTCAAGAAGCTGAGGGCGTCATGGCCGAAGGAGAT GGCTAGACTTCTAGACCCATCGCTGCCTGATGAACGGCGCTCCGAGCTGT GGGAGATCATGTGTTCGGGGGGCGATGTTCTGAGGCAGCGGTTTGCCTGG GCTATTCCGGACGAGAGGGCGCTTCGGATCATAAAGCATTTCGGCCCCAT CGTGGAGATTGGCAGTGGGCTGGGGTACTGGGCGAAGCTCTTGCGCGCCC GAGGTGTGGACATCAACGCCTACGACAAGGTGGCGGGCACCCCGGACACC GCCTCCGCAGCACCCGACTCCTCTCGAACCAAGGGCAAGAGTACGAGCAA AGACGCCAAGGTCAAAAGTGCAGCCGAAGGGGTTGTTAAGGAGGACGCTG ACGAGGGCGGGGGAGACGAGACGCCTTCGTTCTGGATCAAGGTGAATGAG GGTGGCCCCGACGTGTTGGAAGAACCGTGCAACGAGGGCCGCTCGCTGTT CCTGTGCTACCCGGACGACTTCGAGGGAGAGACGGAAAGCCTGGGTCTCC GCTGCTTGCACGCTTTCGAAGGAGACGTGGTGATCCATGTCGGGGAGCTG TTCGGGGACTCTGTCAGCATGACGCCGGGCCAATCGCCGTGGGGTCGCAC GACCTCGCAGGAGTGCCAGGAAGAACTGGCGTCCAAGTTCCACTGCATTC TAAAGGTACCCCTCCCTAGCTGGCCTCACTCTCGCGACACGCTGACCGTG TGGAAACGGCACTCGTTTTGCTCCATCCAGTACGATGATGACGACGACGA CGATAGCGATGATAACGAGGCAGACGAAAAAAGCAATGGAGGCGACGATG GCTCAAAAGCCCAAGGCAAGGAGCAAGGAGGAAAGGGCAAAAAGTCGTCA CCCAACGGCGGTGGCGGGGATGACCGAGAGGCTAATGGCAAGGGCCGAAA AGGGGGAAAGAAGGCGGAAGGAAGCGGCAAGGACGGCTCCGATGGTGATG ATAGCGACGACTCTCATTCTTCTTCAGGATCCGATGATTTCGGGTCGATA GAAGGCCTGCCGATAGGGATGCTCGACGTCGACATGTACGCGTTTGTACC CGAAGACGAGACGATGCCGTGCGCGCAGGCGGCACCGTGTGCACGGTTTC TTCTCGACGCGGAACCGTAAGAATATTAAGGCGTAGTGGTAGCTTGCGTG TGTCAAAAAGGGTGCCTTCGTTCGTGGAAACCTTCGTCGCGCTTGGAACG TAGCTTCAGATTTTCGTTTCTTTACGGCTCACGGGGTCAGACGGCCAGGG AGTCTGTAGCGGCTGTGACTTCTCGCAGCATATCCGAGCGGTCATTCTTT AGGCTCGAAGGACGTGTTGTCATTGGATAAACGAATGACCAGCGTTGGCT GGGAGGCGTCGGCGGGAGGGTGGTAGAGTACCGAACCTGGTGATGTCGGT GTCAGGTTTATTCTCTTGAGCGTACGTCGCTGTGGCGTTCGTTTAGTCCT GGAACAAATGCGACGAAGGCGGGTTCAGTTGCGCTTCGCGAGAAACGTAC CTAGGCTAGACTCTTTCGGTGTTGTGTTCTCCCATTTTCCCGTTGCTCCC GGAGTAAACCAGCTGTAGTACAGCGCCTTGTTAGTCTCCGATGCAACATC ACACGGAGGAGTTGCTCTGAGGTGCGTTTACCTTGGATGTTGGGTGCGAG AAAGGGCTCATGCTAGAAGTTGCCGTCCGTGGCGATATCGGAGATCAGCA ATGTTCTTGTTGAATAGACAACCTTGTTTTTGTGGCGGAACTTGGTCGAA CTGTGCGTAAAAAAGATAAATATCTCGATGTGTGTTTCGGCCGACTATCA GCACGGGTCGCAACTCGTTCAGAGATGAAAAGCCGAACGGCCGCGGTCGT CGTCTCTCAATCTCAAGTCATACTTCGGTAGTTGAAAAGCAGGCTGTCGC GAAGATGAAGGTGGCAAAAACTCGTTGTTCGTCTCGATAACAGAAGTAGC GAAAGGATGATTGTGGGATTCGGCACAATTCCACACAAGTTTTCTTCCTG TTGTGTCAGGGATGGGGTAAACACCAGGGCTTTTTGCTTCTTTTTATTTC TTTTCATGCCACACCTTCCTCCTGCCGTGCGTGCTGAATTGTATTTTTAT CGCGAGAAGGGTCCAGCCGTCCCTTTCCCTCGTCAACGGTGCC back to topprotein sequence of EsuBft199_10a-0001 >EsuBft199_10 ID=EsuBft199_10|Name=EsuBft199_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=422bp
MAPSSKKRKTGSATPVGATAAGADGAGAKSTSIELLDKFKKLRASWPKEM ARLLDPSLPDERRSELWEIMCSGGDVLRQRFAWAIPDERALRIIKHFGPI VEIGSGLGYWAKLLRARGVDINAYDKVAGTPDTASAAPDSSRTKGKSTSK DAKVKSAAEGVVKEDADEGGGDETPSFWIKVNEGGPDVLEEPCNEGRSLF LCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRT TSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDDDDD DSDDNEADEKSNGGDDGSKAQGKEQGGKGKKSSPNGGGGDDREANGKGRK GGKKAEGSGKDGSDGDDSDDSHSSSGSDDFGSIEGLPIGMLDVDMYAFVP EDETMPCAQAAPCARFLLDAEP back to topmRNA from alignment at Scaffold_499:813921..819421- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft199_10a-0001 ID=EsuBft199_10a-0001|Name=EsuBft199_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5501bp|location=Sequence derived from alignment at Scaffold_499:813921..819421- (Ectocarpus subulatus male Bft15b) GCTAGCCTGCTGCACGACGCCGTCTCTGTCGTGTCCCTCCGCGAATCCTG
CACAGAAGCTTCTATCCGAGCTCGCCGACACCGCTTTTACCTCCGTAAAC
GATGGCACCATCCTCGAAGAAACGCAAAACAGGATCAGCAACGCCGGTGG
GCGCGACTGCTGCTGGTGCTGATGGTGCGGGCGCAAAGAGCACGTCGATC
GAGTTGCTGGACAAGTTCAAGAAGCTGAGGGCGTCATGGCCGAAGGAGAT
GGCTAGACTTCTAGACCCATCGCTGCCTGATGAACGGCGCTCCGAGCTGT
GGGAGATCATGTGTTCGGGGGGCGATGTTCTGAGGCAGCGGTGAGTCGGT
GCGTGTGTGGACGAACACACGTTCCATTGCTCGGGTTGAGGTTTTTTGTT
TTTTTTTTGTTTCTCTCCCATCATTGGACTCTGCCGTCTGCCCCTCTGGC
CCCTATCCTCCACTTCTACTAGCTAGACGACCCAACCGGGGTCACATAGG
AGGGGGGGGTTGGACCCCCTCCTGCGGTTCATGCCTGAGGTATTTTTATC
GCGAGAAGGGTACAGCAATCCCTTCCCTCGCGACTTACGAAGTCGATTAT
GGTTTACTAACAAACGAGCTTTGCAGCGCGTCGCTTTCATCCTAGACCAG
GATTTATTTAGTGAGAAAAAAACTCTCCCTGCCGGGACTCGAACCCATGA
CCTGGCCCTTAGCAGGCTGCGAGGCTACCCACTAGACCACCGGGGCGACC
GTGTGGCCATGCGGACTTTTCGGCGTGGGGGTCTGCCTGCACCAGCCGAT
CCGTACTGCTGGCAGGATCATCGGGTTTCATTCCAAGCAATAATCTCTCC
AAGCAACAACTCGTTTTGTTCAGTTTCCATTCACTCTTCGTAAAATGCCC
CACTGCTGCCTGTGGTCCACAGGGACAGCAGGTTCTGAATGAACTCTGCC
TTCCTCCGAATATGAACCGCTCACGTGATTTGGCATTTCCTCGGTGATAT
CCCACCCTGTTGTGCTCGATGTTTGTTTTTTATAGGTTTGCCTGGGCTAT
TCCGGACGAGAGGGCGCTTCGGATCATAAAGCATTTCGGCCCCATCGTGG
AGGTGAGAAGGAACTGGTGCAACTGTGTAAACACGACCCTGCCGCAAGCA
CCTCTGCCGTGTACTGCTGTGCAGTCTGATGGCTGCGATACTACTGTGTA
GTGTGATACCTCCTCCTCAGCCCGCCAATCAATAACTAAACTGAACAGAA
CGCTGGAAATGCTAGCTTCAATACAGCGAGACAGAGAGAGCAGGGCGATC
AGCACCAGGCAGTTTTTAAGGGTAAGGCTCGTGTGACGTACGATCTACAG
ATACCTTGCACATTTTCGGGGCCCACGGCAGCTGCGACAGACCTTAAGGG
CGTGTTCAAACATGACGCCCGTGCTTCTCAACACGAACTCAATACCGCCC
CAAGGGTCACTGCAGTTGGGACCAGCGTCAGGCCCATGGCGACAGCTGTA
GCACGTGCCCTCGCCCCCACGCATCAGCACAATCTATTCACCTCGTCGGA
TGCCAACTGACGGGTGAGACAAGTACAACTTTTTGTTGCTCGCGACCTCA
TCTGCAGCAGCACGGTTCGCCACTCTCCCGAGTCCCCACACCTTGCCTCC
GGCCTACTCTCCACGCAGATTGGCAGTGGGCTGGGGTACTGGGCGAAGCT
CTTGCGCGCCCGAGGTGTGGACATCAACGCCTACGACAAGGTGGCGGGCA
CCCCGGACACCGCCTCCGCAGCACCCGACTCCTCTCGAACCAAGGGCAAG
AGTACGAGCAAAGACGCCAAGGTCAAAAGTGCAGCCGAAGGGGTTGTTAA
GGAGGACGCTGACGAGGGCGGGGGAGACGAGACGCCTTCGTTCTGGATCA
AGGTCGGTGGGGATTCGTGATTTGTTGGGCGGATAATGCGCGCCCCCTGT
TCTCGCCTGTGCTTTTTGCGAATCGCGCCGAAGAGTGAAATGTGCACCTG
TCATGTGCGGTGGACGAATAGATGACAAACCCACCTTCATTGCGACCCTA
CAGTAGCGCCGTCTCTCTGCACGGGCGGGATCAGCTAGACCGGCCTAATA
CTGGTTTATTACGGTAGTGTTCCGCTCTGCGCGTCCTGCTTTGTATGAGC
AGGTTGTGAGTGGATACTGTGGCGCTTTCCAACATTAAAGAAATGTTCTT
TTATTTCGGCGTCCGATACATGTCGATGCTTGGGTGAACCTTTTCTGCGA
TAAACCGAGTGGCCAAGGGCTTCGAGGCGACAACATGTTAGCACCACACC
GCCTACGGTTTCTGCGAAGTGCAGGCGATATCGTCCTCACCGAGCTTGAT
CCGCTCCTTTTGTCCCTTTGTCGGTGCTGATGTAGCGGTGGGTGTTCCTG
CTTGACAAACCATGTCATCGTATGCAATGCAGGTGAATGAGGGTGGCCCC
GACGTGTTGGAAGAACCGTGCAACGAGGGCCGCTCGCTGTTCCTGTGCTA
CCCGGACGACTTCGAGGGAGAGACGGAAAGCCTGGGTCTCCGCTGCTTGC
ACGCTTTCGAAGGAGACGTGGTGTGTGCTTTTGCGTCCGTCCGGTAGCGA
CGACAGAGATTGTTTTGTTTGTTTGTTTTTTTCCCATCATTGGACTCTGT
CGTCTGCCCCTCTGGCCCCTATCCTCCACTTCTACCAGCTAGACGACCCA
ACCGGGGTCACATAGGAGGGGGGGTTTGGACCCCCTCCTGCGGTTCATGC
CTGAGATAATTTTGCCGCGAGAAGGGTACAGCAATCCCTTCCCTCGCGAC
TTATGAAGTCGGTCAAGTTCACTAACAACGAGCTTTGCAGCGCGTCGCTT
CCAACGGAGACCAGGATGAAATAAGCGAGAAAAAACTCACTCTGTCGGGA
CTCGAACCCATGACCTGGCCCTTAGCAGGCTGCGAGGTTACCCACTAGAC
CACCGGGGCCACGGTGTTGTGTTCCTGGCCAGTGCCCATCTACTCTGCAG
GTGGCACGCTGTGTCAACAGGTTGTTGTTATATTGCAACATTTGAAGCTG
TGGAGGGCAGATACTCGCAAAGCTTATCCGTATTCCATGGTATCTGCCAT
TTTCACTTGTATCACAAAATAGTCGTGCACCTTCACACATGTGGGTTGTA
GAACACACGGGCTCGAAACCCTGGTTGGCTGTGAACATTTTTTTGCCGAG
TTTGACATTTTCTACAAGGCGCGTTCGTTCCACGTTGCCATTGTAGCATA
AGAACCGGCGCCCATGCGCGATTTCTGTGCTTAGGTGATCCATGTCGGGG
AGCTGTTCGGGGACTCTGTCAGCATGACGCCGGGCCAATCGCCGTGGGGT
CGCACGACCTCGCAGGAGTGCCAGGAAGAACTGGCGTCCAAGTTCCACTG
CATTCTAAAGGTCGGACCCACGACAACTTGAGGCTGTCATCTGGTTAAGG
TTCGCCACGCTTTCGTCGGTGGTTGGATCTGTTCCCTACGCTGACGGCAT
GGAATACTAGGATAATCACAATTATTACACCGGGTGGGTGTGGTGTTGAA
ATGTGGGCAGAATCCGCTCGTCACTGCTGTGCGCCAATCACCCCTACTCT
CGCGCCCAAAGTAGATGCTGCAGAACTCGCTCTGGTTGTCCTGTTCACAA
GACTTTCTCGCAGTTACTTTGTGTTTACAGATATGCACGACCGGCCAAGC
ATTCACGTTCCTCACACCGGTAGAATAGGCAGATACAGGATTTTCATTCG
AACGAGGAGTTCGTTGTCAGGGGTTTCCAATGGCAGGAACGTTCCTCTTG
AGAGTGCATGGCCGCACTGCTCAATGGCATGGCCTGGTTGGAAGCTGAGG
CATAGACAAACCGTTATTTCCCCCAAGCCCAAGTACAAATGCGCTAATGG
CGTAATCATGTGTATAACCGGCAGTGACAGTGGTCCAACCCCCGTCCCCG
TCATCCCCTTCTCTCTCTCTCCCTCACTCTCTCCCTCCCCGCGTGTCATC
GCCCGAACACCAGGTACCCCTCCCTAGCTGGCCTCACTCTCGCGACACGC
TGACCGTGTGGAAACGGCACTCGTTTTGCTCCATCCAGTACGATGATGAC
GACGACGACGATAGCGATGATAACGAGGCAGACGAAAAAAGCAATGGAGG
CGACGATGGCTCAAAAGCCCAAGGCAAGGAGCAAGGAGGAAAGGGCAAAA
AGTCGTCACCCAACGGCGGTGGCGGGGATGACCGAGAGGCTAATGGCAAG
GGCCGAAAAGGGGGAAAGAAGGCGGAAGGAAGCGGCAAGGACGGCTCCGA
TGGTGATGATAGCGACGACTCTCATTCTTCTTCAGGATCCGATGATTTCG
GGTCGATAGAAGGCCTGCCGATAGGGATGCTCGACGTCGACATGTACGCG
TTTGTACCCGAAGACGAGACGATGCCGTGCGCGCAGGCGGCACCGTGTGC
ACGGTTTCTTCTCGACGCGGAACCGTAAGAATATTAAGGCGTAGTGGTAG
CTTGCGTGTGTCAAAAAGGGTGCCTTCGTTCGTGGAAACCTTCGTCGCGC
TTGGAACGTAGCTTCAGATTTTCGTTTCTTTACGGCTCACGGGGTCAGAC
GGCCAGGGAGTCTGTAGCGGCTGTGACTTCTCGCAGCATATCCGAGCGGT
CATTCTTTAGGCTCGAAGGACGTGTTGTCATTGGATAAACGAATGACCAG
CGTTGGCTGGGAGGCGTCGGCGGGAGGGTGGTAGAGTACCGAACCTGGTG
ATGTCGGTGTCAGGTTTATTCTCTTGAGCGTACGTCGCTGTGGCGTTCGT
TTAGTCCTGGAACAAATGCGACGAAGGCGGGTTCAGTTGCGCTTCGCGAG
AAACGTACCTAGGCTAGACTCTTTCGGTGTTGTGTTCTCCCATTTTCCCG
TTGCTCCCGGAGTAAACCAGCTGTAGTACAGCGCCTTGTTAGTCTCCGAT
GCAACATCACACGGAGGAGTTGCTCTGAGGTGCGTTTACCTTGGATGTTG
GGTGCGAGAAAGGGCTCATGCTAGAAGTTGCCGTCCGTGGCGATATCGGA
GATCAGCAATGTTCTTGTTGAATAGACAACCTTGTTTTTGTGGCGGAACT
TGGTCGAACTGTGCGTAAAAAAGATAAATATCTCGATGTGTGTTTCGGCC
GACTATCAGCACGGGTCGCAACTCGTTCAGAGATGAAAAGCCGAACGGCC
GCGGTCGTCGTCTCTCAATCTCAAGTCATACTTCGGTAGTTGAAAAGCAG
GCTGTCGCGAAGATGAAGGTGGCAAAAACTCGTTGTTCGTCTCGATAACA
GAAGTAGCGAAAGGATGATTGTGGGATTCGGCACAATTCCACACAAGTTT
TCTTCCTGTTGTGTCAGGGATGGGGTAAACACCAGGGCTTTTTGCTTCTT
TTTATTTCTTTTCATGCCACACCTTCCTCCTGCCGTGCGTGCTGAATTGT
ATTTTTATCGCGAGAAGGGTCCAGCCGTCCCTTTCCCTCGTCAACGGTGC
C back to topCoding sequence (CDS) from alignment at Scaffold_499:813921..819421- >EsuBft199_10a-0001 ID=EsuBft199_10a-0001|Name=EsuBft199_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1269bp|location=Sequence derived from alignment at Scaffold_499:813921..819421- (Ectocarpus subulatus male Bft15b) ATGGCACCATCCTCGAAGAAACGCAAAACAGGATCAGCAACGCCGGTGGG CGCGACTGCTGCTGGTGCTGATGGTGCGGGCGCAAAGAGCACGTCGATCG AGTTGCTGGACAAGTTCAAGAAGCTGAGGGCGTCATGGCCGAAGGAGATG GCTAGACTTCTAGACCCATCGCTGCCTGATGAACGGCGCTCCGAGCTGTG GGAGATCATGTGTTCGGGGGGCGATGTTCTGAGGCAGCGGTTTGCCTGGG CTATTCCGGACGAGAGGGCGCTTCGGATCATAAAGCATTTCGGCCCCATC GTGGAGATTGGCAGTGGGCTGGGGTACTGGGCGAAGCTCTTGCGCGCCCG AGGTGTGGACATCAACGCCTACGACAAGGTGGCGGGCACCCCGGACACCG CCTCCGCAGCACCCGACTCCTCTCGAACCAAGGGCAAGAGTACGAGCAAA GACGCCAAGGTCAAAAGTGCAGCCGAAGGGGTTGTTAAGGAGGACGCTGA CGAGGGCGGGGGAGACGAGACGCCTTCGTTCTGGATCAAGGTGAATGAGG GTGGCCCCGACGTGTTGGAAGAACCGTGCAACGAGGGCCGCTCGCTGTTC CTGTGCTACCCGGACGACTTCGAGGGAGAGACGGAAAGCCTGGGTCTCCG CTGCTTGCACGCTTTCGAAGGAGACGTGGTGATCCATGTCGGGGAGCTGT TCGGGGACTCTGTCAGCATGACGCCGGGCCAATCGCCGTGGGGTCGCACG ACCTCGCAGGAGTGCCAGGAAGAACTGGCGTCCAAGTTCCACTGCATTCT AAAGGTACCCCTCCCTAGCTGGCCTCACTCTCGCGACACGCTGACCGTGT GGAAACGGCACTCGTTTTGCTCCATCCAGTACGATGATGACGACGACGAC GATAGCGATGATAACGAGGCAGACGAAAAAAGCAATGGAGGCGACGATGG CTCAAAAGCCCAAGGCAAGGAGCAAGGAGGAAAGGGCAAAAAGTCGTCAC CCAACGGCGGTGGCGGGGATGACCGAGAGGCTAATGGCAAGGGCCGAAAA GGGGGAAAGAAGGCGGAAGGAAGCGGCAAGGACGGCTCCGATGGTGATGA TAGCGACGACTCTCATTCTTCTTCAGGATCCGATGATTTCGGGTCGATAG AAGGCCTGCCGATAGGGATGCTCGACGTCGACATGTACGCGTTTGTACCC GAAGACGAGACGATGCCGTGCGCGCAGGCGGCACCGTGTGCACGGTTTCT TCTCGACGCGGAACCGTAA back to top
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