EsuBft1973_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft1973_2a-0001
Unique Name	EsuBft1973_2a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_347:172701..178907+
coding sequence from alignment at Scaffold_347:172701..178907+

spliced messenger RNA

>EsuBft1973_2a-0001 ID=EsuBft1973_2a-0001|Name=EsuBft1973_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=831bp|location=Sequence derived from alignment at Scaffold_347:172701..178907+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCTCGACCCCGACGCCTCCGAGACGCCAGTCAGACAGGCGAAGCAC
GCCTGGGCATCACAACCCAGGTAAGGGGTACGGCAGCAACCCAGATGGGT
CTAGGTTGGCAGGAGAATTCGCACTCGCACGTCGAGGTGGGACCGCCACC
ACCCCCTTCTCCGTAGCACAACCCAGCCCGTCTCCTCTCGACGCAGCTGG
AGGGTGGATCAGCAGCCAACAGAGTGGGCAGCGTGCCGGGGGCAAGGCGA
AGCAAAAGCCTAACGGCGAAGAGAGTGGGCAGAAGCTGGCGAGAGAACAT
TGGCGTAGGGTAGCCCCTTCCATGACCGAGGACCAGGACGTGGAGGTGTG
CACGAATGAAGGAGGCAGGAAGACCGTTCATGTGGCCATGCAGGAAAAGA
CCAAGGCGTGGGAGGATCGCGTGCGCATTGTATGCATATGCTTCAGAACT
TCGATCACGAAANGAGTGCAGGCACCGACAGCAGTTCTGTACAGATGTAT
CAGCGCACACAATCCTTTCGCAGAGAGTGGGCAGAAGCTGGCGAGAGAAC
ATTGGCGTAGGGTAGCCCCTTCCATGACCGAGGACCAGGACGTGGAGGTG
TGCACGAATGAAGGAGGCAGGAAGACCGTTCATGTGGCCATGCAGGAAAA
GACCAAGGCGTGGGAGGATCGCGTGCGCATTGGAAACGAAGTGATCACGG
ACGGGAGGAGCAAAGAAATGGCGGAGAAGGACTCCGAGGGCAAGACCGGG
GAAGGCAAGAAGGACGCCGGAGTATTCGACGAGGAGAACGAGGAGGGGTC
CGAGGCAAGTCGATCTTGTTCTGTGTTTTAG

protein sequence of EsuBft1973_2a-0001

>EsuBft1973_2 ID=EsuBft1973_2|Name=EsuBft1973_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=276bp
MGSTPTPPRRQSDRRSTPGHHNPGKGYGSNPDGSRLAGEFALARRGGTAT
TPFSVAQPSPSPLDAAGGWISSQQSGQRAGGKAKQKPNGEESGQKLAREH
WRRVAPSMTEDQDVEVCTNEGGRKTVHVAMQEKTKAWEDRVRIVCICFRT
SITKXVQAPTAVLYRCISAHNPFAESGQKLAREHWRRVAPSMTEDQDVEV
CTNEGGRKTVHVAMQEKTKAWEDRVRIGNEVITDGRSKEMAEKDSEGKTG
EGKKDAGVFDEENEEGSEASRSCSVF

mRNA from alignment at Scaffold_347:172701..178907+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1973_2a-0001 ID=EsuBft1973_2a-0001|Name=EsuBft1973_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6207bp|location=Sequence derived from alignment at Scaffold_347:172701..178907+ (Ectocarpus subulatus male Bft15b)
ATGGGCTCGACCCCGACGCCTCCGAGACGCCAGTCAGACAGGCGAAGCAC
GCCTGGGCATCACAACCCAGGTAAGGGGTACGGCAGCAACCCAGATGGGT
CTAGGTTGGCAGGAGAATTCGCACTCGCACGTCGAGGTGGGACCGCCACC
ACCCCCTTCTCCGTAGCACAACCCAGCCCGTCTCCTCTCGACGCAGCTGG
AGGGTGGATCAGCAGCCAACAGAGTGGGCAGCGTGCCGGGGGCAAGGCGA
AGCAAAAGCCTAACGGCGAAGGTTAGTATCGATTGAGCCTCGCATAGGTA
CGCTCAAGCCGGCAACACAGCAGCGGTAGTGCAGCTCCATTTGGCGCATC
TAGGTGCAATACGCCGTGCGTCAGGTGCGACGGGCGGAAGCAGTTTTTTC
CCTCCGCTTGTATACGTGGCCGCCGAGTGCAGGCACCGACAGCAGTTCTG
TACAGATGTATCAGCGCGTATGTAAAAATGGTGGGGAGTGGCGGGTGTTG
CTTCATCTCGCGTTTCAACTTGGGCCATGTGTGTCTGGGCAAATAAAATT
TAACACAGGCTGTAATGATCACACAGCAGGTCGTACTGAAGGAATGCTCC
ACTCTCGCTGTAAAAGTGCAGACAAGGGCCTGTCCTGACGCACATCGATA
CGTACGCCTTCCTCCTGTACCTCGCCAGGTTCCACTCGTCTCTGTTGGAC
GCCTTCGGAGAAGGTCGTACTCTGGAAGGCGAAACAGACACAATCCTTTC
GCAGAGAGTGGGCAGAAGCTGGCGAGAGAACATTGGCGTAGGGTAGCCCC
TTCCATGACCGAGGACCAGGACGTGGAGGTGTGCACGAATGAAGGAGGCA
GGAAGACCGTTCATGTGGCCATGCAGGAAAAGACCAAGGCGTGGGAGGAT
CGCGTGCGCATTGTATGCATATGCTTCAGAACTTCGATCACGAAANGAGT
GCAGGCACCGACAGCAGTTCTGTACAGATGTATCAGCGCGTATGTAAAAA
TGGTGGGGAGTGGCGGGTGTTGCTTCATCTCGCGTTTCAACTTGGGCCAT
GTGTGTCTGGGCAAATAAAATTTAACACAGGCTGTAATGATCACACAGCA
GGTCGTACTGAAGGAATGCTCCACTCTCGCTGTAAAAGTGCAGACAAGGG
CCTGTCCTGACGCACATCGATACGTACGCCTTCCTCCTGTACCTCGCCAG
GTTCCACTCGTCTCTGTTGGACGCCTTCGGAGAAGGTCGTACTCTGGAAG
GCGAAACAGACACAATCCTTTCGCAGAGAGTGGGCAGAAGCTGGCGAGAG
AACATTGGCGTAGGGTAGCCCCTTCCATGACCGAGGACCAGGACGTGGAG
GTGTGCACGAATGAAGGAGGCAGGAAGACCGTTCATGTGGCCATGCAGGA
AAAGACCAAGGCGTGGGAGGATCGCGTGCGCATTGTATGCATATGCTTCA
GAACTTCGATCACGAAACCTCGTGTGTTGCACTCACGTTCTCCTTGTGGG
TCGTACGGTAAGGGTTAGCATCACTTTGAACCTTCTAGTAGTGTGAGGCA
GTGGTCCCACGACAACATTTCCCACATGACGTGCTCGCGTTTGGCTTGGA
AGGTGTTTCGTTTATGCCGGAACAAGGTGCCACACTTTCAATGTACGTTC
TTGTCTGCTGTGAGTTTCTGGAGACGGGGTGGAGATATTCCAGGCTCCCG
CCACGTTCTGAACTGCTAATTCTGGCGCAAGATGAAATACTGCTACACTA
TGCATGATGGAGTACAGTATGCATAGCACTGACATGACCGCCAGATATCG
GAGACGATTTGTTCCTCGCTAAACAGATACCCGCACGCTTCTCGCTTGCA
AGAGCCACAAACACACGAACAGGGTTACCGACTGCTGTTCTTATGCAACG
CACGAGCACATCAGTAGGTTCCCGTGTATGACGTCGCCGTGAGTTGCACG
CGACTCGAGTACATGTATCGGCTCTCACGATACTACTGTTGTAGTCTCAA
GCAAAACCCTAACGTTTGCACGGTGTGTCTTTGCCCCCCCCCCTACCCCC
CCCCATTGGGCGGTGGAGGACTCTCCGGCGTAAGATCCAAAATGGATCGA
ACGGTGGAGGGGGGGGGGGGGGGTTCGTTGCTTGAAGGGGNNNNNNNNNN
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NNNNNNNNNNNNTCTACGGCAACGTCGTACGTGTGCTTAATCGGAGGTGG
AAGTCTCGTTCCACCCTATCCCTTTCACACGTACGTAATGCTCTCCATCG
ACAGCACGGGACCTCCCTCTGCCACATTTTTATGCGAAAAAATGCGTGTG
CCCTGCGGGCGAAATGCCCACAACTAACATTGGAAGTACTTCGTTCTTTT
CAGGGAAACGAAGTGATCACGGACGGGTAGATCATGTTGTGCGGGGTCGA
GACCCTCACTCCGCCCAAGGGGGATGATCGCACCAGGTTGTGTTGAAATG
GCCAAGCACCCTCGAGGCAGTTATACAGTGCTTATAACCGTCTCTGGAAG
TGAAAGCATCAGAAAATAAATTAAGTAATACGCAACTGTCATCCGTATGC
AAGGAAGCACAAGATGCCGAAAACCCTTAGCACGATGCAGCGAACTCTTC
ATGCGACTCGCGGAATATCTCACGGCGCTTCGCGCTTGGTGATGTGAGAG
CCTGGTTCGGTGAGAACCCNACGATAGCAGGAGGAGCAAAGAAATGGCGG
AGAAGGACTCCGAGGGCAAGACCGGGGAAGGCAAGAAGGACGCCGGAGTA
TTCGACGAGGAGAACGAGGAGGGGTCCGAGGCAAGTCGATCTTGTTCTGT
GTTTTAG

Coding sequence (CDS) from alignment at Scaffold_347:172701..178907+

>EsuBft1973_2a-0001 ID=EsuBft1973_2a-0001|Name=EsuBft1973_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=831bp|location=Sequence derived from alignment at Scaffold_347:172701..178907+ (Ectocarpus subulatus male Bft15b)
ATGGGCTCGACCCCGACGCCTCCGAGACGCCAGTCAGACAGGCGAAGCAC
GCCTGGGCATCACAACCCAGGTAAGGGGTACGGCAGCAACCCAGATGGGT
CTAGGTTGGCAGGAGAATTCGCACTCGCACGTCGAGGTGGGACCGCCACC
ACCCCCTTCTCCGTAGCACAACCCAGCCCGTCTCCTCTCGACGCAGCTGG
AGGGTGGATCAGCAGCCAACAGAGTGGGCAGCGTGCCGGGGGCAAGGCGA
AGCAAAAGCCTAACGGCGAAGAGAGTGGGCAGAAGCTGGCGAGAGAACAT
TGGCGTAGGGTAGCCCCTTCCATGACCGAGGACCAGGACGTGGAGGTGTG
CACGAATGAAGGAGGCAGGAAGACCGTTCATGTGGCCATGCAGGAAAAGA
CCAAGGCGTGGGAGGATCGCGTGCGCATTGTATGCATATGCTTCAGAACT
TCGATCACGAAANGAGTGCAGGCACCGACAGCAGTTCTGTACAGATGTAT
CAGCGCACACAATCCTTTCGCAGAGAGTGGGCAGAAGCTGGCGAGAGAAC
ATTGGCGTAGGGTAGCCCCTTCCATGACCGAGGACCAGGACGTGGAGGTG
TGCACGAATGAAGGAGGCAGGAAGACCGTTCATGTGGCCATGCAGGAAAA
GACCAAGGCGTGGGAGGATCGCGTGCGCATTGGAAACGAAGTGATCACGG
ACGGGAGGAGCAAAGAAATGGCGGAGAAGGACTCCGAGGGCAAGACCGGG
GAAGGCAAGAAGGACGCCGGAGTATTCGACGAGGAGAACGAGGAGGGGTC
CGAGGCAAGTCGATCTTGTTCTGTGTTTTAG