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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LGN8 |
| ProteomeId | EsuBft1875_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 172 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.19e-34 |
| EggNOG OGs | KOG3175@1|root,KOG3175@2759|Eukaryota |
| Ec32 ortholog description | Protein phosphatase 4 core regulatory subunit R2 |
| Ec32 ortholog | Ec-10_002940.2 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Preferred name | PPP4R2 |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K00962,ko:K15425 |
| KEGG Reaction | R00437,R00438,R00439,R00440 |
| KEGG Pathway | ko00230,ko00240,ko03018,map00230,map00240,map03018 |
| KEGG Module | M00394 |
| GOs | GO:0000018,GO:0000278,GO:0000775,GO:0002244,GO:0002376,GO:0002520,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006282,GO:0006464,GO:0006807,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0008287,GO:0008589,GO:0009966,GO:0009968,GO:0009987,GO:0010569,GO:0010646,GO:0010648,GO:0010921,GO:0015630,GO:0019208,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0023051,GO:0023057,GO:0030097,GO:0030154,GO:0030234,GO:0030289,GO:0030674,GO:0031323,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0035303,GO:0035304,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043666,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0045879,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051171,GO:0051174,GO:0051246,GO:0051336,GO:0060090,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0098687,GO:0098772,GO:1901564,GO:1902494,GO:1903293,GO:2000779,GO:2001020 |
| EC | 2.7.7.8 |
| Description | protein phosphatase regulator activity |
| COG category | J |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01009,ko03016,ko03019,ko03400 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1875_3a-0001 ID=EsuBft1875_3a-0001|Name=EsuBft1875_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1729bp|location=Sequence derived from alignment at Scaffold_389:673937..681634+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCATGCACTCCACCATCAGTGGCCCTCGAACAGATGGACGATGTAT TATGCACGAAGAGGTGTCTTGTGCCTCTGAACACCTGGGGACGGCCCGAG AGGGATGGGTTGTCAACGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCG GCGGCAAGAGCGGGGCAAGAAGGCGGCGCACCCTCCGGGGTTGTTCCGTC GTCGTCGTCGTTGCCGTCGTCGCCAACCTCGGTGGTGGCTGTCAAGGTCG AGGAGCAGGGGTGTGTGCAAGTCCAAGTTCCCCTAGGGGGCGGGGTGGAG GACGGGGGGGTTGTCGAGGGGAGCAACGGAGATGTTTCGGTCGACGCCGC TGTAGTCCCGGCAGACGACGAGTCGACTGCACGAGAGGGGGCAGGCGACT GGGAATCGGGAAGCAGCGGGAAGAGAGAGCCAGGGAGGAAGCGACTCAAG GTTGAAGTTGCCCCAGAGGCCCCCATGATGAGCGAGTAGGTAGTTGGGTG GGGTGAGTGGGTGGGTACGGCACCTTCATCACATTTGCATTGGGATTTGA TTTGTTTTTCGCGTGCCGATCTTGCTGGTCGCAACCCTGTTCGGCTGGAC TACAACAGCGCTACGCCCGTTTTTATGTTTCTTTCTGTTACTTGTTTTGT CAGTTGCGTGAGAGATTTCTCGTCGCCGCGGGTGGGAAGAGCGGAACGGG AGGGAGGGCGGGGGGGGGGGCATTTGTCAACGTTTTGTTTTGTGTTGTTC TGTGCTAGCCTCGAACTTTCGGCAAGAAAGTTGGCGAGAATGGCAAGACC AGGAGTGTTTTTGCCGTTTTACAACGTCTGCATGAATTTCCGCTCCAGTC CAGCGGAGCTCCTTCCCCGTGTCGTACGCTGCGTTTATCGCTTTGTCATA CAACCATGCCCGAGAGCAGCAGCACAGCAGCAGCATGGTGCATGTTGCTA CGGGGGTATGCACGGCAAGCGACGCACTCGGTGGGGGGAAGCGTGCAGAG AAACTACAAACAACCAGAGATCGTAACTGTACGTGAAGGGAGCCAAGTAG GAGAGGCGTGAGCAATGTACGTGTGCGGCGCGAAGGCTGATCGGTGTGCG CGCTCCTCTTGTTTAGTTGCCACGCTTCGCTTTGTAGTTAGCCCTTGTCC GGCCGGCTGCCGCCAGTATGACAGTGTTTCGTACGGCGAGCTAGCCACCA CTCCGATGTATTCCCTCCAACGCGGTTGTCGAGGGGAGTCGATTTGCAAT CGCCTGCAGATCATGCAAGCAATCGCCCAGGATGACGTTCTTCCAACGGC CAACGGGGTGGCAGCACGTAATATTGAGGAATATGCCCCGAGAGAGTGGC GCAGGGGGGGGGGCAGCAATGGACGGTACGGTCGAGACTTCCTTTGCACA GCATGCTCGCCGTGCTTTTGTTGGGCGCGGTGCTTTCGCTAGATTCAAAA TGTAGCATACGAACGTGTGAAACTGTCTGTGTGAGAACTTGAGTTTAGTT TTCTTCTGCCAAGAGTTGGTCCCGCCCGAAGACGGCGGGACCAAGAGGCA TCCTATTGTGCCCACGCTATTGTAGTAGAAACGAATCAGCAGTTACGTCC GTTGAGAGCGCCATGTACATTCTGAAGCTTTAGCCTCAGCTTCTCAGGCC AATATCCGTGGAAGTTTCACGCGACTCCCCCGCCCCTTGCCCGACCCGGC CCGAAATGCTGATCTCGAGCTACATTGCA back to topprotein sequence of EsuBft1875_3a-0001 >EsuBft1875_3 ID=EsuBft1875_3|Name=EsuBft1875_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=162bp
MCMHSTISGPRTDGRCIMHEEVSCASEHLGTAREGWVVNAAAAAAAAAAA AARAGQEGGAPSGVVPSSSSLPSSPTSVVAVKVEEQGCVQVQVPLGGGVE DGGVVEGSNGDVSVDAAVVPADDESTAREGAGDWESGSSGKREPGRKRLK VEVAPEAPMMSE back to topmRNA from alignment at Scaffold_389:673937..681634+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1875_3a-0001 ID=EsuBft1875_3a-0001|Name=EsuBft1875_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7698bp|location=Sequence derived from alignment at Scaffold_389:673937..681634+ (Ectocarpus subulatus male Bft15b) ATGTGCATGCACTCCACCATCAGTGGCCCTCGAACAGATGGACGATGTAT
TATGCACGAAGAGGTGTCTTGTGCCTCTGAACACCTGGTATGTTGTAAGG
AAGGCTCGAGTGAAGGCGGGGTGTATAGCAGCGACAGGGGACGGCCCGAG
AGGGATGGGTTGTCAACGGTCAGCTAGCCCCCCAGGGCGATCGAAAAAGT
GCGAGTACGCCTCCCCGCCCCACCCCCCCATCCCCTACCGGTTCAGTTGA
CCCCCTCCCGTTCATCTATCGCGCTTGTTTCGCCCTCGCTTTTGATCGTC
GCTGAACTCAGCACGACACCGCGAACAACGGCGCAGCAGCAGCAAAAAAA
AAAGCAAACTCAACAACAACAGCAGCAGCGGCGGCGGCGGCGGCGGCGGC
AGCGGCGGCGGCGGCAAGAGCGGGGCAAGAAGGCGGCGCACCCTCCGGGG
TTGTTCCGTCGTCGTCGTCGTTGCCGTCGTCGCCAACCTCGGTGGTGGCT
GTCAAGGTCGAGGAGCAGGGGTGTGTGCAAGTCCAAGTTCCCCTAGGGGG
CGGGGTGGAGGACGGGGGGGTTGTCGAGGGGAGCAACGGAGATGTTTCGG
TCGACGCCGCTGTAGTCCCGGCAGACGACGAGGTGCGTGCGTCCGTGTGC
GAGAAGCGTTTGCCCGTGTGTGCGTGTGTCACGTTCTTCTGAAGACATTA
GCTGTATGGTCGTAACATAGATGCGGTATTGAAAGCGTCGTCGACAAACG
TTGTCAGTCCTACTCTGTAGCAGGGTTTCTGTTGTGTACGCGCGAGCAAG
GGGAGCACTGACTGGTGCCACTATTTTTTTTTGCTGTACGAATGGTTTTC
TTTTTCCTATGAACGTGACTGTTATTGCCGGGTCGCTTCAGGAATACCCC
GGGGGTCACGTTTTGCGCACACGGGCCTCATCTCTCGTGGTCGACTAAAC
CGAACAAATCCGACCGGCTTCATTCGGTAATTCATTCCGAAATACATTCC
GTATTGCATTCCGTAGTACATTCCGTAGGTTGCGGAAGATCCCCCCCCCC
CCTTGGAACCGATTGTCACAGTCAGAATACTCTGCATCAGAAAACAGTGC
AGGTGCCGTCGAGAGGTGGCGTTTTGAAATCTTCTCGTGGAGATCTTCCC
CAGAAAGTTCCGTTTTTTTGGGGGGTATCCCCTTTTCGTGGTGGAGTAAT
CGAGCTGCGAACAACCGGTGCTGTGGGTGTGGTCACCTACGCAGCCAACG
ANCCCCCCCCCCCCCCCCTGTGTTTTGCAGGGCCGAAGTAGGAAGAAATG
TGCGCTCCTTCGGGTGTGTTAGCCTCGCGTAGGTGTTGGTGTTGATTCAG
CCGCCTCTGCTGCTGCAACAGGGTGCTTGCCTTAACGACTGAAGCGCCCC
GGTTCGAGAGGGCATATAGCCAATCCCGGGCTTTCTGGCACATTGCATGG
TGCACTGGTGTTCGTCGTCGGCGACTGTTTTTTTTTTTTTTGTGGGTGCT
TGTCCTGAGCAGACGACCTCATCCTGTGATCGCGGTGTTGTTGGCGCCTC
CTGTATGTGGGCCACTAAATAGCCCGCCGGAAGCGGTGTTTCTTGGCGGA
GAGTTTCGCTTGGTTAGCTGGCAGCAAAGAAACGGAGGGGGTATTACAGT
TTTGGGAGTGGGTGTGGTATTGATGCATGCAGTCAACGGTGCGTTGGATC
GGTCATGGCGTTTTTTTGCACGCCTGACCTGGTCTCCGCCTGGCTGTGCA
CGCCAGACAGCCTCTGATTTTGCGGCGTAAAGCGTTTCTTCCACAGTGCA
AAATAACGGAGAACAAAGAAATGCTTCGCAAGAAATATGCATCGACTGCT
GGTTGCTGTGCACACGACGAGCATGTCGTTCGTCGGCAGCTGCTGCTGCT
GCTGCTGTTCCAGCACAGACCCTTTGTTATCTGGTATATCTCGCGTTCTC
CTCGTTGTATTAATTACGGTTTTTTCTTTTCGGCCTATCCTTGTGCACGG
GGGACTGTGGCGTGTACAAGCAGTCGACTGCACGAGAGGGGGCAGGCGAC
TGGGAATCGGGAAGCAGCGGGAAGAGAGAGCCAGGGAGGAAGCGACTCAA
GGTGGGCCGGGGTAGTGGGGCCGCCGGGCACACCAGGCCAACAAGGGTGT
GTTCGTGTGTGGGTGTGTGTGTGTTTTTTTTTGCTGTTATTCCTGTTTTG
TTTTTTTTTCTTTACCCCTTCCCGGCGTCTCGTCTTGCCGATTGCTTGCC
ACTGCTGTTGTTGTTGTCGGGATCTGGGTCTGGTCTGTCTCTTTCGGCTA
AGGACGAAGACACACGTGCGCCTAAGGACTCCGCCGCTGCGATAGAGATA
TTGGCTGCGGCGAACGAACGAACGAACCATGGACCCTTGCGCCTGCTGTT
GCGGGCGACGTTGGGGTTCGGGAAGTTATCTGCACCGATAGATGGACGTT
CCGAATAGCACGCCTCCGACACCCCCTCTCCCTCACCACGCCCCAGGCGT
CAACATGCGCACCCGGGTCGTAGATCCCCCCACAAATACGGCACCGGCCG
TTGTTGATCCATGACTCCGGCTGTAGTAGCGATACAACATATGGCCAAAC
CCTTTTTGACCAGCCTCTACAGCGTGATGCCACCAACAATTTGGACGGGG
TCGTTTTTGAAGGCGTACCATATGGAGTGTGCTTAAGGTCAAGTCTGGTA
GGATCTTCCGGAGAACTTTCCAAACAATATTGGAGGTAGAAGGCGCCGAA
GCGGAGGGAGTGTTTCCTCGATATGGGCGATAGAGTACGTCACTGGCAAG
ACCCTTGTGGTGGCGATCCGAAATTGCGCCAACCCGTGCTACTCCCCCTC
GCCGAATACCTCGGTGTTACGATCGGGGTTGGGTTTTCGTCGCTCGGCAA
CGGCGTTGCAAAACAAGCCGCCCCCCCCGAGGTGTGAACGGTGGATTAGT
CAGCAGTGGGAAGGGAAAAAGGGAAGTTCTAGCAGGACACTACAAGAGAC
TTGGAGTGCCCTCGGAGAATGAAGCTTTTGACCAAGTGTTTAAGAAGGAG
GTGGACGCATGGGCCCAAAAAGAAGAAGAGACATCGAAGGCAGACGTTGG
GAACGTAGAACTAGAAAAGGAGTTCACTGAGGACGAGGTTGAGGCGTGTG
TGAACAAGCTGAAGTGCCACAAAGCAGCAGGAGCGGATGGGATAGTCAAC
GAGTTCATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCTCTGTCCTT
CTTATGCCCATGTGATCCACTCTGACGAAGGGTTGAGCGAGTTCGTCAAC
TCCTTCGAATGTGTATGGCAGCGCGAGGTTTGGTGCTGAGAGTTGCGAGA
CGGACTTGAATCAGTAGCTCTCACTTTTTCATGGCACGGCATTTGCCAGG
TTCAGAGCGAAGCCAGGGCGAATCAAAAGTCTGTGCGTGTAGAACATTAT
GGGTGTATCCTGCTGGGTTCATAGCACGCAGCCATCTGTGTGTGGGAAAC
ACCGGCGGTGACGAAGGTGTGAACCGGATTGTGGCCCAAGTCAACACATC
ATGGGGGCTCGCTCACACGGGGTACTATCGAGTTTCACGGAGCCCCACCC
TTTCGGTGGCTCTTTTGTTTCTTTTTGTGGAACCTGCCGCCCGGGTGTGC
GCGAGCAATCCGGCGAGGAATATTCCCCTGGGAAGCCAGTTCCCACGTTT
GTTTTGTTTCCCGCAGTTCATGCTCGTTCGAACGCCTTTCGTCGAGGCCA
AAGGAAAGCTATATGTTCGTGCCGAGCCAAGGGTGCTACTATTGTGTGCG
TCTATTCTAGAGGAACGTCGTGGTCAAGGAAGAAGAGCACCACACGCTCC
CGATGGCCTTCGGTTTTTGGCCGTTTGCCTGCGGTTGCTTTGCTCAGCTG
GCGTGTTCCGACTCTTATTCTGCTCTTGCGCGTGCTCCAAATCACATCCG
ACCCAACCTGTCCTGGTCGAATCGTCTTCCAAATTATTCTCGGACCGCCC
TTACCACTCCCCCCCCGCTCCCCCCGCCCCCGCCCTTCCCTTGCGATCTC
CGACCCCCCATCGAAACAGGTTGAAGTTGCCCCAGAGGCCCCCATGATGA
GCGAGTAGGTAGTTGGGTGGGGTGAGTGGGTGGGTACGGCACCTTCATCA
CATTTGCATTGGGATTTGATTTGTTTTTCGCGTGCCGATCTTGCTGGTCG
CAACCCTGTTCGGCTGGACTACAACAGCGCTACGCCCGTTTTTATGTTTC
TTTCTGTTACTTGTTTTGTCAGTTGCGTGAGAGATTTCTCGTCGCCGCGG
GTGGGAAGAGCGGAACGGGAGGGAGGGCGGGGGGGGGGGCATTTGTCAAC
GTTTTGTTTTGTGTTGTTCTGTGCTAGCCTCGAACTTTCGGCAAGAAAGT
TGGCGAGAATGGCAAGACCAGGAGTGTTTTTGCCGTTTTACAACGTCTGC
ATGAATTTCCGCTCCAGTCCAGCGGAGCTCCTTCCCCGTGTCGTACGCTG
CGTTTATCGCTTTGTCATACAACCATGCCCGAGAGCAGCAGCACAGCAGC
AGCATGGTGCATGTTGCTACGGGGGTATGCACGGCAAGCGACGCACTCGG
TGGGGGGAAGCGTGCAGAGAAACTACAAACAACCAGAGATCGTAACTGTA
CGTGAAGGGAGCCAAGTAGGAGAGGCGTGAGCAATGTACGTGTGCGGCGC
GAAGGCTGATCGGTGTGCGCGCTCCTCTTGTTTAGTTGCCACGCTTCGCT
TTGTAGTTAGCCCTTGTCCGGCCGGCTGCCGCCAGTATGACAGTGTTTCG
TACGGCGAGCTAGCCACCACTCCGATGTATTCCCTCCAACGCGGTTGTCG
AGGGGAGTCGATTTGCAATCGCCTGCAGATCATGCAAGCAATCGCCCAGG
ATGACGTTCTTCCAACGGCCAACGGGGTGGCAGCACGTAATATTGAGGAA
TATGCCCCGAGAGAGTGGCGCAGGGGGGGGGGCAGCAATGGACGGTACGG
TCGAGACTTCCTTTGCACAGCATGCTCGCCGTGCTTTTGTTGGGCGCGGT
GCTTTCGCTAGATTCAAAATGTAGCATACGAACGTGTGAAACTGTCTGTG
TGAGAACTTGAGTTTAGTTTTCTTCTGCCAAGAGTTGGTCCCGCCCGAAG
ACGGCGGGACCAAGAGGCATCCTATTGTGCCCACGCTATTGTAGTAGAAA
CGAATCAGCAGTTACGTCCGTTGAGAGCGCCATGTACATTCTGAAGCTTT
AGCCTCAGCTTCTCAGGCCAATATCCGTGGAAGTTTCACGCGACTCCCCC
GCCCCTTGCCCGACCCGGCCCGAAATGCTGATCTCGAGCTACATTGCA back to topCoding sequence (CDS) from alignment at Scaffold_389:673937..681634+ >EsuBft1875_3a-0001 ID=EsuBft1875_3a-0001|Name=EsuBft1875_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=489bp|location=Sequence derived from alignment at Scaffold_389:673937..681634+ (Ectocarpus subulatus male Bft15b) ATGTGCATGCACTCCACCATCAGTGGCCCTCGAACAGATGGACGATGTAT TATGCACGAAGAGGTGTCTTGTGCCTCTGAACACCTGGGGACGGCCCGAG AGGGATGGGTTGTCAACGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCG GCGGCAAGAGCGGGGCAAGAAGGCGGCGCACCCTCCGGGGTTGTTCCGTC GTCGTCGTCGTTGCCGTCGTCGCCAACCTCGGTGGTGGCTGTCAAGGTCG AGGAGCAGGGGTGTGTGCAAGTCCAAGTTCCCCTAGGGGGCGGGGTGGAG GACGGGGGGGTTGTCGAGGGGAGCAACGGAGATGTTTCGGTCGACGCCGC TGTAGTCCCGGCAGACGACGAGTCGACTGCACGAGAGGGGGCAGGCGACT GGGAATCGGGAAGCAGCGGGAAGAGAGAGCCAGGGAGGAAGCGACTCAAG GTTGAAGTTGCCCCAGAGGCCCCCATGATGAGCGAGTAG back to top
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