Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1809_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 214 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1809_5a-0001 ID=EsuBft1809_5a-0001|Name=EsuBft1809_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2148bp|location=Sequence derived from alignment at Scaffold_350:14534..16771+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGATCCTCCGGAGGAGCCCGATGATCTTCAGAGTTCAGCTGTGGTGAG
AAGCCGCAGCCGGAGCGTTGTGCGTGATCCCGTGGCTGCCATCGCTTCTG
CAGGCCAAGTCGGGTGGGCGAGGCCAGGATTAGTCGGGCCGTGCTGCGAG
AGGCACGGCAGGTGCGGCGGGATTTGTGTGTTCCACCGAGCAGCCACCAA
GTGCTGCGTGGTCGTCAGGGAGGGCGACACTGCGGGAGGAGAGAGCAGCA
GTAGGCCGGACGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGGGGTACCGCGTGCACTCTACATCATCAGCTGGC
GGGGCCCGGAAATACGTAGCTGTGGGATGGTGGAGTTCAAAGACACGAGA
AAGCCGTCGTGTGCCTGTCTGCTACACCGCTACACCGAGGAACGTCGGGA
CGCCGAGGGACGTCGGGTGTGGGCGGGTGGGGAGGGAAGCAAAACGGACC
AGCCGCGCGGTGGATTTCCGCGGGCACTATCTTCATTTTGGTTGGTACCG
GAATGTGTTTTATTTTGTTTTTTTCCTGATTCTTTTGTATGTGGCGTTTA
GCAGTAACGGGCGATAGCTTGTATTGCACGTGAATAGTCGCAAGTGAGGC
GCTGTTGCGGACTTGCATAGATCGCTGTTAATTGCTTGTTGAAATCCATG
GGTGTTTCCGCCGCCACATGCTCGAGTTTCACGCGTCACCGCTTGTTTTG
TGTTCCCTGTGTGGCCTGTGTGGTTGCAGATTAAGGGAAGGTGGCGCCGT
GCGTGGGTTTTATGTTTTGGAGAGTGTAATGCTCGGAGAGTTTTGCGCCC
GGCCGGTAGATATTCTGCAATGTGACAGAGTTATGGTCGTCCACTCAGGT
CGTCCACTCATGATTGAGGTGGAACTATTTCGGTCTTGCAGTTATTGGAT
GACGGAGGGCGTTGCCTCTTGGGTGTTGTTGGACTCTCTTTACGGGAGGA
GTTTGGTCATGTTTCCACGATGTTGCGTGAACCATGTGTCTGATTTGT back to topprotein sequence of EsuBft1809_5a-0001 >EsuBft1809_5 ID=EsuBft1809_5|Name=EsuBft1809_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=90bp
MDPPEEPDDLQSSAVVRSRSRSVVRDPVAAIASAGQVGWARPGLVGPCCE
RHGRCGGICVFHRAATKCCVVVREGDTAGGESSSRPDVDX back to topmRNA from alignment at Scaffold_350:14534..16771+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1809_5a-0001 ID=EsuBft1809_5a-0001|Name=EsuBft1809_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2238bp|location=Sequence derived from alignment at Scaffold_350:14534..16771+ (Ectocarpus subulatus male Bft15b)
ATGGATCCTCCGGAGGAGCCCGATGATCTTCAGAGTTCAGCTGTGGTGAG
AAGCCGCAGCCGGAGCGTTGTGCGTGATCCCGTGGTAAGGACATTACTGA
GTGAAACGACGCGCAAGTTTTGACTAGGGTTTCGAGTTGAGGCGAGAACC
AGGGGTGTAGGAGATGATGGGCAGGCTGCCATCGCTTCTGCAGGCCAAGT
CGGGTGGGCGAGGCCAGGATTAGTCGGGCCGTGCTGCGAGAGGCACGGCA
GGTGCGGCGGGATTTGTGTGTTCCACCGAGCAGCCACCAAGTGCTGCGTG
GTCGTCAGGGAGGGCGACACTGCGGGAGGAGAGAGCAGCAGTAGGCCGGA
CGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTGGGGTACCGCGTGCACTCTACATCATCAGCTGGCGGGGCCCGGA
AATACGTAGCTGTGGGATGGTGGAGTTCAAAGACACGAGAAAGCCGTCGT
GTGCCTGTCTGCTACACCGCTACACCGAGGAACGTCGGGACGCCGAGGGA
CGTCGGGTGTGGGCGGGTGGGGAGGGAAGCAAAACGGACCAGCCGCGCGG
TGGATTTCCGCGGGCACTATCTTCATTTTGGTTGGTACCGGAATGTGTTT
TATTTTGTTTTTTTCCTGATTCTTTTGTATGTGGCGTTTAGCAGTAACGG
GCGATAGCTTGTATTGCACGTGAATAGTCGCAAGTGAGGCGCTGTTGCGG
ACTTGCATAGATCGCTGTTAATTGCTTGTTGAAATCCATGGGTGTTTCCG
CCGCCACATGCTCGAGTTTCACGCGTCACCGCTTGTTTTGTGTTCCCTGT
GTGGCCTGTGTGGTTGCAGATTAAGGGAAGGTGGCGCCGTGCGTGGGTTT
TATGTTTTGGAGAGTGTAATGCTCGGAGAGTTTTGCGCCCGGCCGGTAGA
TATTCTGCAATGTGACAGAGTTATGGTCGTCCACTCAGGTCGTCCACTCA
TGATTGAGGTGGAACTATTTCGGTCTTGCAGTTATTGGATGACGGAGGGC
GTTGCCTCTTGGGTGTTGTTGGACTCTCTTTACGGGAGGAGTTTGGTCAT
GTTTCCACGATGTTGCGTGAACCATGTGTCTGATTTGT back to topCoding sequence (CDS) from alignment at Scaffold_350:14534..16771+ >EsuBft1809_5a-0001 ID=EsuBft1809_5a-0001|Name=EsuBft1809_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=270bp|location=Sequence derived from alignment at Scaffold_350:14534..16771+ (Ectocarpus subulatus male Bft15b)
ATGGATCCTCCGGAGGAGCCCGATGATCTTCAGAGTTCAGCTGTGGTGAG
AAGCCGCAGCCGGAGCGTTGTGCGTGATCCCGTGGCTGCCATCGCTTCTG
CAGGCCAAGTCGGGTGGGCGAGGCCAGGATTAGTCGGGCCGTGCTGCGAG
AGGCACGGCAGGTGCGGCGGGATTTGTGTGTTCCACCGAGCAGCCACCAA
GTGCTGCGTGGTCGTCAGGGAGGGCGACACTGCGGGAGGAGAGAGCAGCA
GTAGGCCGGACGTGGATNNN back to top
|