Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1809_3 |
| Protein domains | TMhelix |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 35 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1809_3a-0001 ID=EsuBft1809_3a-0001|Name=EsuBft1809_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=350bp|location=Sequence derived from alignment at Scaffold_350:26121..26470+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCTCTACTGGTGACGCCAGCGCCGGCCGTTGTTCTCTCTCTCTACCGCTC
TCTCTCTCTGTGTTTCTCTCTCGCTCTGTCTCTGTCTGTCTCTGTCTTAG
TCTCTGACAACTGTAATTGCGTGCCCTTTCACCCATGAGTTCACTTCGCA
GTGAGAGTACTGACATGGCACGCTCGCTCACCCACGGCCACGCCACACCA
TGCAGACAAACAGAACGTATATTTGCAGCATCTTTCACTACGTTATGGGT
CCACTTCGCAGGGAGTGTGCTGCATGACCTCCTCTTTGCTACTCATATGT
GGGACACCACGCGATACACGTATAGATTATTTTCAGTGGAAAACAGATGA back to topprotein sequence of EsuBft1809_3a-0001 >EsuBft1809_3 ID=EsuBft1809_3|Name=EsuBft1809_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=71bp
MSSLRSESTDMARSLTHGHATPCRQTERIFAASFTTLWVHFAGSVLHDLL
FATHMWDTTRYTYRLFSVENR back to topmRNA from alignment at Scaffold_350:26121..26470+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1809_3a-0001 ID=EsuBft1809_3a-0001|Name=EsuBft1809_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=350bp|location=Sequence derived from alignment at Scaffold_350:26121..26470+ (Ectocarpus subulatus male Bft15b)
CCTCTACTGGTGACGCCAGCGCCGGCCGTTGTTCTCTCTCTCTACCGCTC
TCTCTCTCTGTGTTTCTCTCTCGCTCTGTCTCTGTCTGTCTCTGTCTTAG
TCTCTGACAACTGTAATTGCGTGCCCTTTCACCCATGAGTTCACTTCGCA
GTGAGAGTACTGACATGGCACGCTCGCTCACCCACGGCCACGCCACACCA
TGCAGACAAACAGAACGTATATTTGCAGCATCTTTCACTACGTTATGGGT
CCACTTCGCAGGGAGTGTGCTGCATGACCTCCTCTTTGCTACTCATATGT
GGGACACCACGCGATACACGTATAGATTATTTTCAGTGGAAAACAGATGA
back to topCoding sequence (CDS) from alignment at Scaffold_350:26121..26470+ >EsuBft1809_3a-0001 ID=EsuBft1809_3a-0001|Name=EsuBft1809_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=216bp|location=Sequence derived from alignment at Scaffold_350:26121..26470+ (Ectocarpus subulatus male Bft15b)
ATGAGTTCACTTCGCAGTGAGAGTACTGACATGGCACGCTCGCTCACCCA
CGGCCACGCCACACCATGCAGACAAACAGAACGTATATTTGCAGCATCTT
TCACTACGTTATGGGTCCACTTCGCAGGGAGTGTGCTGCATGACCTCCTC
TTTGCTACTCATATGTGGGACACCACGCGATACACGTATAGATTATTTTC
AGTGGAAAACAGATGA back to top
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