EsuBft1715_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1715_3a-0001
Unique NameEsuBft1715_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_129contigScaffold_129:21720..29935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
SymbolPGLP
StatusManually annotated
Seed ortholog2880.D7FJB9
ProteomeIdEsuBft1715_3
Protein domainsPIRSF000915
Protein domainsIPR006357
Protein domainsIPR023214
Protein domainsIPR023215
Protein domainsPF13242
Protein domainsPTHR19288
Protein domainsIPR006349
Ownerapollo_admin@sb-roscoff.fr
Notephosphoglycolate phosphatase chloroplastic os:arabidopsis thaliana gn:pglp1b pe:1 sv:1 [Automatic annotation]
Nb exon13
Max annot lvl2759|Eukaryota
Length2068
Hectar predicted targeting categoryother localisation
Evalue5.08e-215
EggNOG OGsCOG0647@1|root,KOG2882@2759|Eukaryota
Ec32 ortholog description2-phosphoglycolate phosphatase, eukaryotic
Ec32 orthologEc-12_008080.1
Date last modified2016-06-28
Date creation2016-06-14
Preferred namePGP
KEGG rclassRC00017,RC00151
KEGG koko:K01101,ko:K19269
KEGG ReactionR01334,R03024
KEGG Pathwayko00627,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,map00627,map00630,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00532
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237,GO:0044424,GO:0044444,GO:0044464
EC3.1.3.18,3.1.3.41,3.1.3.48
DescriptionPhosphoglycolate phosphatase
Descriptionphosphoglycolate phosphatase activity
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01009
NoteDittami S., annotator
Cross References
External references for this mRNA
DatabaseAccession
GO0019439
GO0031227
GO0044270
GO1901361
GO0046872
GO1901565
GO0005773
GO0050794
GO0003333
GO0004721
GO0005515
GO0005911
GO0008152
GO0006470
GO0043169
GO0042995
GO0009570
GO0042623
GO0044712
GO0015893
EC3.1.3.18
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1715_3aEsuBft1715_3aEctocarpus subulatus male Bft15bgeneScaffold_129 21720..29935 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1715_3a-0001-exonagat-exon-77177Ectocarpus subulatus male Bft15bexonScaffold_129 21720..22804 -
EsuBft1715_3a-0001-exonagat-exon-77170Ectocarpus subulatus male Bft15bexonScaffold_129 23665..23751 -
EsuBft1715_3a-0001-exonagat-exon-77176Ectocarpus subulatus male Bft15bexonScaffold_129 24678..24802 -
EsuBft1715_3a-0001-exonagat-exon-77171Ectocarpus subulatus male Bft15bexonScaffold_129 25592..25725 -
EsuBft1715_3a-0001-exonagat-exon-77174Ectocarpus subulatus male Bft15bexonScaffold_129 26387..26450 -
EsuBft1715_3a-0001-exonagat-exon-77169Ectocarpus subulatus male Bft15bexonScaffold_129 26932..26984 -
EsuBft1715_3a-0001-exonagat-exon-77179Ectocarpus subulatus male Bft15bexonScaffold_129 27155..27230 -
EsuBft1715_3a-0001-exonagat-exon-77173Ectocarpus subulatus male Bft15bexonScaffold_129 27490..27576 -
EsuBft1715_3a-0001-exonagat-exon-77175Ectocarpus subulatus male Bft15bexonScaffold_129 28101..28173 -
EsuBft1715_3a-0001-exonagat-exon-77180Ectocarpus subulatus male Bft15bexonScaffold_129 28836..28939 -
EsuBft1715_3a-0001-exonagat-exon-77172Ectocarpus subulatus male Bft15bexonScaffold_129 29520..29623 -
EsuBft1715_3a-0001-exonEsuBft1715_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_129 29798..29853 -
EsuBft1715_3a-0001-exonagat-exon-77178Ectocarpus subulatus male Bft15bexonScaffold_129 29916..29935 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1715_3a-0001-exonagat-three_prime_utr-5934Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_129 21720..22704 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1715_3a-0001-cdsEsuBft1715_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_129 22705..22804 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1715_3a-0001EsuBft1715_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_129 22705..29935 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1715_3a-0001 ID=EsuBft1715_3a-0001|Name=EsuBft1715_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2068bp|location=Sequence derived from alignment at Scaffold_129:21720..29935- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCTCGATGTCTAATGGGGCCCGACAAAACTGCCATTTTTCAACGGC
TTGCGGCGTCACTCGCGCAGGGACAAGTTTGCGCGGCGTGGCGCAGGCCA
AGGCTAGGCCGGTCTCAAGGACGATGCGCATGGCCAACTCCCAGCGCCTC
GGCGACCCCATTGGACAAATGCTGGACAAGACGGACGTCTTCATCTTCGA
CTGTGACGGCGTGATCTGGAAGGGCGACAGCCTCATCGAAGGCATACCCT
CCGTCCTTGACCGTCTACGACAGGCTGGAAAACGGATATTCTTCGTAACG
AACAACTCTACCAAGAGCCGCAAGGGTTACAAGTCCAAGTTCGACTCCCT
CGGGTTGAGCGTGGAGCCCGAGGAGATTTTCTCATCGAGTTTTGCGGCCG
CGGCATACCTAGAACAGACAAGGTTCAAGGACACCGGGAAAAAGGTACAC
GGCGGTGCTAGAGTATCAGTGAAGTATGGACAGGACGTGGGCGCGAAAGT
TGGAGGACAAGCAGATGCAGGCATCGAGGAGGAGCTAGACCTCATCGGTG
TGCCTCACTTCGGGGGACCCTCGGACGGGAGTAAAGGGGTGGAGCTCAAG
CCGGGCTTCGCCCTCCCGCACGACGAGAACGTGGGAGCCGTGGTCGTCGG
GTTCGACAGGATGATCAACTATTACAAGATTCAGTACGCCCAGCTGTGCA
TCAACGAAAACCCCGGGTGCGAATTTATCGCCACCAACACGGACGCGGTC
ACCCACCTCACCGACGCGCAGGAGTGGGCTGGGAACGGCGCGATGGTCGG
AGCCATCAAGGGATGCACCGGGGTGGAGCCGACGATCGTAGGCAAGCCTG
GTCCCCTGATGATCGACTACATCATCCAGAAGTACAACGTTGAGAGGTCG
CGCATTTGCATGGTCGGCGACCGCTTGGACACCGACGTGCTTTTCGGAGC
CAACAATGGCCTGATGAGCATCCTCACATTGAGCGGCGTCACGACCGAGG
AGAAGCTGCTTAGCCCGGAGAACAAGATCAACCCTGACTACTACGTAAAC
AGCATCAACGACTTCTTCCCTTACTACACGTAGTAGACACGCAGGGTTGC
ACTCATTGGTAAACATCATCAACGACTTCTTCCCTTACTACACGTAGTAG
ACGCGCAGGGTTGCACCCATTGGTAAACGTTTCGTGTGAACACGGAACGG
CTGCAAGAGAGACAAAGCATGTCCTGTTTCGCGTCGAAGATGGTGCTTCT
TCCCTTGTCGGACCAGCTGAGACGAATGTAACCCGTCTCTAAAAGGCATG
AATAGCAAAGATACGCTGAGGATATGACGATTTTTACCGGTATAGTTTTT
CTAGATTTTTCTCGCTGCCTAGGTGTGGTGTTGTGGATAATATGCACCAC
CCTATTTCGGGAGGACGTTTTCACGGAATTATTGAAGGCGAAGTAGCTCA
TTCCGGCGACCGGAGTATTGATGTTTTTAGTCCACCCGATGCCAGACACA
CATTTTGTTCTTAGGGCTGTATCGGCCAGCTATAGGTAAGAAACTTATCC
ACCGCTGAGCTGTGTTTTCACCCCCAGTTTTGAATGTTCGGGGAGAATAT
TTAATATTTTGGTTTGTCTCCCTCGCGGCCAGGTACTACTGCTGTAATGC
TGCGCTCGTTCTGGCACATAGTTGCACCTGTTGCTGAGAAGGAAATAGAG
CTGTCACGAGTCCAGATGATGCAGATAGAGTGAATAGATGGCGAGATGTT
GATATTTGGCAGCCTGCTGATAGTCGTTGTGATGGTTGACCGCGACAGAA
TTGATGCTTCCAATCATTCCCGCGGGTTTTCCTGTGTTCTTTTCTTCGCT
ACCGGTGGGTCTTGCTTTGCAGGGCGAAAACTGTGATGGTCTGAACGGTT
GCAGATGCCGAGAGGGTGTTTTCCATGTATTTTTGCACGTTGATCGTGCT
GTAGATGATGTTGAAATTCGCGCATTCGGTCATCCTTCTCACCAACGCGT
TCAACAACTCCGGTGCGACCGCACTCCCCGTACCGACTATTTTGCGGTCA
ACCTAAAATGGTTGCAAT
back to top

protein sequence of EsuBft1715_3a-0001

>EsuBft1715_3 ID=EsuBft1715_3|Name=EsuBft1715_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=360bp
MLSMSNGARQNCHFSTACGVTRAGTSLRGVAQAKARPVSRTMRMANSQRL
GDPIGQMLDKTDVFIFDCDGVIWKGDSLIEGIPSVLDRLRQAGKRIFFVT
NNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVH
GGARVSVKYGQDVGAKVGGQADAGIEEELDLIGVPHFGGPSDGSKGVELK
PGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAV
THLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIQKYNVERS
RICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVN
SINDFFPYYT
back to top

mRNA from alignment at Scaffold_129:21720..29935-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1715_3a-0001 ID=EsuBft1715_3a-0001|Name=EsuBft1715_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=8216bp|location=Sequence derived from alignment at Scaffold_129:21720..29935- (Ectocarpus subulatus male Bft15b)
ATGCTCTCGATGTCTAATGGGTGAGCTTCGCGAGGCCCCTGCCCGTGCGC TGGCTGGTTCCCCTCAAATCTCTTGAGCGTAGGGCCCGACAAAACTGCCA TTTTTCAACGGCTTGCGGCGTCACTCGCGCAGGGACAAGTGAGTAAAGGC CGTGCGTGTTTCTTGACTCTACCGGTCCCTCACTCTCGCTTGCGCGCTCG TCCTACCTTATGCATGATGTGCGCTTTCGGATGCAACATCGGACGCCGTC AAATTGCGCCGTTGAACCGGAATGACGGTGCCTGGATCATTTCTTGGGCG GGGAGACATCAGGTTTGCGCGGCGTGGCGCAGGCCAAGGCTAGGCCGGTC TCAAGGACGATGCGCATGGCCAACTCCCAGCGCCTCGGCGACCCCATTGG ACAAATGCTGGACAAGGTACCTTCCCAGCGGTTGCAGGAGCCGGTCGGTC ATGCCAGCGTGTAGACGCAGCAAAGGGCAGTGAGGTTCCGATTCTCCCGT TCGGTCCGACGTTTGGGTAGAAGAAGGGAACATGGCAAGTTTAAGCGCTA CATAGTCCTTTGCCATGCACGCCGGTACGTTGCGTATCTCCCATCTGGAA TAGTGGCTGTCGCTGGCAGTTCCGGCTGTCGCTCCGTTTCTGCCCGCCGT GTGATTCTGGCTCTCTATGCCGTGACTCGTTCACAGTACGTGTAGCAGAC CACTAGCTAGCCGCCGCGGTAGACGAAGAATCCCCCAGCAGGGTGGTGTT GGGGATATGCCACAAAGTGCACCGTAGCGTGGTGTTAACATGTCCATCGG TTAGAACAGAACGAAAACGTTGATGTTGCCCTGCTCTGCCCTGCAGGGGT GCGTCGGCCTGTTTGTTCCCTAGCAGGGCCGGAAGCGGAGCGAGAGGGAG TGCCTCGTCCATTACGAAAAGCCGCTTGATTCTTAACCTGCTGCACCCAT TCGTCCGCTTATTAGAACATGTCTTCCTCGTGTCGCCTGTTCGCAGACGG ACGTCTTCATCTTCGACTGTGACGGCGTGATCTGGAAGGGCGACAGCCTC ATCGAAGGCATACCCTCCGTCCTTGACCGTCTACGACAGGCTGGAAAACG GTGAGGCTCTCGTCAACCGCTAGCAGATAGCGAGTTACTTTGGCTAAGAG AGCGAGCAGAGATCGTGCGGTTGTCGAGCCGGTCCACTTCGTAAAACGCG CGTGTATTGGGAGAGGGTTACATATGTACGACACTGGTAGGTCATCTAGC CCATGAGTTAGTTCACCGCTTTTGTTGTAAAACGCACGGTGAGAAGTGAG TATGTTCTGTGTATTATGAGAAGCAAAATAACAGCGTTTTGATGAACGTT TCAAAGAAAACGTAGTTGACTCTATGGGCATTTTTGAAAAAAAGGTTGCA GCAACGAATACCCTGAGCAACATTTTTTTTTTTTTCTCCCATCATTGGAC TCTGTCGTCTGGCCCTCTGGCCCCTATCCTCCACTTCAACAAGCTAGACG ACCCGACCGGGGTCACATAGGAGGGGGGGGCTGGACCCCCTCCTGCGGTT CCTGCCTGAGGTATTTTTATCGCGAGAAGGGTACAGCAATCCCTTCCCTC GCGACTTACGAAGTCGATTATATATCTATATGCTTTGGGGAAGGCAATAA CCTAGCCCGAAACGTTTGTGTTTTGTGTTTTGTGGTACACTTCTGCGGAC TTGGTTGTTTTGGTTCCCTTCCCCGACCCCCCCCCCTCGAAAAACGCTTG GCGGCGCCGCAGGATATTCTTCGTAACGAACAACTCTACCAAGAGCCGCA AGGGTTACAAGTCCAAGTTCGACTCCCTCGGGTTGGTGAGCGCGGTTGTT TTTGTTCATTTTTTCTTGTCGATGTTCTTTCCTGTATTCGTTGATTTGTT CGCTTCTTTGCCTTTTATTTTCTTCCTCTCTTCTGTTCCTCTGTTTTCGT TTCAAAGATATTTTCCTTTTGTCTGGGTCCGGGTTGTCTTGCTGTTTTTC GGCCAGAGAATGGTCCTCGTGCCTTTTTTCCTTTCTCGGCCAAAATCTCC GAACAAAAGGTGGAGTAGTGCTGTATTTGGTCGAACGTGAGTCCTTTCTG TGGAGTCCTTGAGAGTGCATTGAAATGAAATTGCTGTACTATTAGTGCAC AGTTTATATTGTGAAACCTAATCCGCTTCTCCGGAGGTGGAAAACCTCGG ATATTGGCTGGATATTGGCATGGGTACGACCTCGCGCCCCCACTTTATCT CCAATTTGTCCGTTCCACACCCGTCTCTTTGACTGTTTTTTTGTTGCTTC GCCACCCCACACGCCCTCCCCTGTACACAACTCTTATCCGCCGACCTCCA TTTCCGCAGAGCGTGGAGCCCGAGGAGATTTTCTCATCGAGTTTTGCGGC CGCGGCATACCTAGAACAGACAAGGTTCAAGGACACCGGGAAAAAGGTAG GGCCTATCTTTGTCTTGGCTGGGTTTGCCGACCTTATTTGCCACCGTTTT CGGCGCGACCGAAGGCTGCCGTGTATCAGCCAAGCGCAGCGAATGGGGAT TGCAAATCGAGCAACTGGTGGTGTTCCGAAGCATCGGGTACCCAATTGGA TTTCTCGGGGTCGTTTTAAAGCTCGTGAACAGCTGTGCGTACGCAGGAAG AATATCGGTTGACAAGAAGCAGACAGAGATGGATGGTACAGTGATGAAGG CGCAGGTACACGGCGGTGCTAGAGTATCAGTGAAGTATGGACAGGACGTG GGCGCGAAAGTTGGAGGACAAGCAGATGCAGGTCTGCCATGCATCCTCTC GTCGTGCCATTGGTTGCCCGTCCCTTGCAAATCCCGACCACCCTACGACT TCGTGACCCCGACTGTCACACCAACAACGCCTTCGGTTTTTCCTTTCTTT TGGGGGGGGGGTCGTATCTTGCGTCCAAGGTGTACATCGTGGGTGAAGTA GGCATCGAGGAGGAGCTAGACCTCATCGGTGTGCCTCACTTCGGGGGACC CTCGGTAAGCTGAAGCCTGTAGGACAGAACTCATGGAATGCATCGCAGAC GGAGTTCCCACGTGTCTTAACACCCCGAATCGAAGCTGGGAGCGCTCGCT GTAAGGTTTACGACAGGACTCATGCATACACTGCAGACAGAATTCTTGTG TGCTTTACACCCCGGATCGGAGCTGGGGGCGCCCTGTGAACTCTAGGGTA GGAATCACGGCGTGCGTCGTGGACGGAGTTCCTACGTGATAAACACCGCC GATCGGAGCTCTAATCAGGAGACTCTTCAGCGGAGGGACGTAGACCACTA CTGCACGGGTAGGGGCATGAATGTAGAGCTATACTGGAGTTCCCCCAAAT TTCGAAGAAAATAAACAATTTCCCGAAAAAAATTAAACGTTTTGCTGGAG TGTCTTCCCCATACTCAAAAGCACTTGAAACTAATCAAACACACACCGTT CCCTGAACATGGAATTTTTTCTCGTGCCCACGCAGGACGGGAGTAAAGGG GTGGAGCTCAAGCCGGGCTTCGCCCTCCCGCACGACGAGAACGTGGGAGG TATGAATCGGCCGGAGTTGCCCGCGTCGCCTTCCTTTTTCGTGTGTTCCG TACTTGATTGTATTGTGTGGACACTCATTTTTTGAGCTGGGATGGATCTT GCCCTGTTGATCGTGTTGTCGGGTACCGTCTATCTACATCCATGCCTGTG TTCCATCTTATGTCAGCAAGTTCTCCGGGGCTACGTGCGGCCTCGCGCAA GCGTTGCAACGGGCTCCGTCCCGTCTATCTACAGCCCCAAGGGGCACAGG AAAGGGAACAACTAATAGGAGAACAAAGGAATTTAGGGTGGACTTTCTGT GATTATATGTATATTTTCCAATACTTGTGACATGGGCTACCTTTCAATCG TCTGTCCACTCCCACCGAGATGACCTAAACCTGCCACACCTTTCACAACC TCTACGGCTAGCTTGAGAAGGCGTGCACCGCAAGGGTAGTCGTGCGTGCG GCGCCGAATTTTTTCGAATCTTCTCCCGTCAATAGAGGAGGCAAGACCGT CCGGTAGTGGAAGGACGGTGATATTGCGGGTCCCACAAAACACAGAAACC ATTGACCTCTGGACCTTGTTACGTCGTCCTTTTTTGCGGCATTTTTCGGT CCTGTTTGCCCTCCTCGTTTCTCTTATGTTTTGTTTTCTCTCTTTTCTTT TCTTTTTTAGCCGTGGTCGTCGGGTTCGACAGGATGATCAACTATTACAA GATTCAGTACGCCCAGCTGTGCATCAACGAAAACCCCGGGTGCGAATTTA TCGCCACCAACACGGACGCGGTCACCCACCTCACCGACGCGCAGGTCCGT TCGTATGGACACGCAGCATGTTCGTGTTTCATGTTACCAGAAAATATTGT TCGCACAATCACACCAAGAATATGTTGTTGACATGTGCAGGAATGGAAAA GCTGTTTGTCTATGGGAATATGAGGGTGCATGATAGACTCAGCGGCAAGT CCAAGGCCTGTCCGGATGTACATGTCGTTGCGTGGTTGAAGGAGGGTAGC TGCTACATACGAGGCGTGTGGATATTTGTTGTTTCGATTTCCCTTTCCTC TCCTAGCTGTTTTTCTCAGGTTGTACTTCGAGAGACATATCAACTTGCGC ACCAGCGTGCTTTTAATTGGCTTTTTCGAGGAAAACCAAGCGCCGCTGCG AGTGTGTACATTGTTTCTCTCTCAGAGGAGGAGTCGCACTGCCCTGCCAT ATTTCCCCCACGCTCGTTTGCGCTCGACGACTGCGGAGGGTTTGATATAC ACAACGCGTCACCACGCATCTGAGAAATTTGTAGTTGAGAAATTGAGGCT TGGATTTTGACGGGTGTGAAAGTACTTGTGACCCACCCACACTAAGGGTC TGTTTTCCCCGTCGATTCCCCACTGATCTAATATGTAGCGAGAGCTGCGC AAAACAGGGCTTCTTATCGCGCATGATCCCCCCCCAATCATGTGCCTCTT GTCCAGGAGATCATAACCTTACTGCAATATGTATGCCGCGGTGCCTTGAC CCAAGCGTATTCCCCATGTCTATTTTCATGGCCGCTGAGCGTGTGTGTGA CTGACAACAATCTTCTCACCCCATTCCTGGCAGGAGTGGGCTGGGAACGG CGCGATGGTCGGAGCCATCAAGGGATGCACCGGGGTGGAGCCGACGATCG TAGGCAAGCCTGGTCCCCTGATGATCGACTACATCATCCAGAAGTACAAC GTTGAGAGGTAGGCGCAACCGCGTGAGTGTTGCGCGAAATCGCCTGTGTG TTCCTGATGGTCGACTTGTGTTGATTATGATCAACTTATGTTGATCGTGG TCAACTCCGGATGGTCGACTTGTGTTGATGATCAACTCATGTTGATCGTG GTCAAGTTATGTTGATGAGTTGTCCTCAGCACATGGAGGTTAGCGCAGTG TTCTGCTGCTTATGGGGTGTTACACAACTAGAGGTAGAGGCCGGAACTCC TACATATATTTACTGGCGTGTATGTGGCAAATGGCAAGACTCTCGACCTG CTTCCCGCGGAAACACTACATGACCATGAGAACAGAAACCAAGGTTTTTA CCCCAGAGCCGTGATGTTTTTTTTCACAGCAGCAGTGATCGTTTCAGTCT TTCGACCCAGTGCAACTCCCGTGCGACAGTCTGATATCCTCTTTCTCCCT TGATTGGGCTTAAGGTTGAAAGGGGGGTGTCGGGTTGCAGAAAAGCCTGC GCGATGATCGTAGGTATGCACACCCAGAGAGATCCCTCCCCGAAATACAT GTAAGCCGTTGTGGTCCAGACTGTGCAGCAACAACAACAATAACATCATT TGTGCTTGTGCGTACACGTGTGGTTACTTCGTGTCGACCGCGCTAATCGG CCGACCAACAAAATTACGTCAGTCTGATAGCGGGATCTATAACGCGAACG AACACGGTTGCTAGTGGTAAGGGTTGTACCGACAGGGGGGGGCGCAGGAA GTGGCCGACAGTGCGTGTGTGTGTATAATTACTTGCCTTGGTTTTGCAGT CCAGCAGGTCGGTCTTGGACATGTTTGGCGACACAACTGGACATTTATTG CAACACCAGCAGCAGCAACCCAACAACAACCCGCGCTTGTGTCTCTGTGC ATGTATATTTCTCTTCGTCTTCTCCAACTCACAGGTCGCGCATTTGCATG GTCGGCGACCGCTTGGACACCGACGTGCTTTTCGGAGCCAACAATGGCCT GATGAGCATCCTCACATTGAGGTGGGTTTCGGGTGTTGACTTGTCGTTTT CAGTTCTTGGTTTTGCGTTGTGTCTCGCCCCATAACAATGTTCGCTCTTG ATGGTTGCTGTCTGGGGAAGCCTTGATAAGCACCGCCACCTGGACTTGGG TGAGTTTGAGACTGCTTACGCTTCCTTGGTTTGTCGCGTGTCTTGGTCGT ACTTCATCGCCTTGCGGTTTGTTGTCGTTGTCCAACCATGGATGCATGGA TCACCCTCATACTTATTGGGGCATTTGATGCGTCTGTTGTATTGTACTTC AGCGCGTTGCGTTTTGCACCCCTCTTACTCGCCTTTTCATTTGAATTGTT GTTGGGACTAAAGAGCTCGGACTCCGCGTACGCTGTGTTACCGAATTCTT TGGGAATGCCAATCAGCCGAAGCAGAAGCGACGCTACGCCGTTGCGCTAG ATTCAGGCGTCCAAGTCCACCCCCGCGTTCCCAGCAGTGCTTATCGCGGA ACCCCAAAGCGTTATGTCCCGACTTAACGCGGGTACGAGAGTGTCTGCAG CCAACACGATACGACCCCCAAGAGCACATCTCATCAACCCGCGCATGGCA GTAGGAAAAAAACGAAGTCGTCCCGGAAGCGTGTTCAAGACAGCAGCCCG AATTATGTATGGCAAACTTGCATTCAGGTTGGTCGGTGACCGCGGTGCAC ACACGCGTTTTTTGTTGCCTTTCTCACTCCGACTGTGACGGACCCACGAA GCCAACATATCAACAATCTTGCCGTTTAACTCCGCATACAGTAGTGGCCT CGTCGATATCCGTGTTTCACCCACGCGTTGTCCCCCCCACCATCTGCACA CGCCGCCTTCTTCCTGTGCTGCTCAATCCAGCGGCGTCACGACCGAGGAG AAGCTGCTTAGCCCGGAGAACAAGATCAACCCTGACTACTACGTAAACAG CATCAACGACTTCTTCCCTTACTACACGTAGTAGACACGCAGGGTTGCAC TCATTGGTAAACATCATCAACGACTTCTTCCCTTACTACACGTAGTAGAC GCGCAGGGTTGCACCCATTGGTAAACGTTTCGTGTGAACACGGAACGGCT GCAAGAGAGACAAAGCATGTCCTGTTTCGCGTCGAAGATGGTGCTTCTTC CCTTGTCGGACCAGCTGAGACGAATGTAACCCGTCTCTAAAAGGCATGAA TAGCAAAGATACGCTGAGGATATGACGATTTTTACCGGTATAGTTTTTCT AGATTTTTCTCGCTGCCTAGGTGTGGTGTTGTGGATAATATGCACCACCC TATTTCGGGAGGACGTTTTCACGGAATTATTGAAGGCGAAGTAGCTCATT CCGGCGACCGGAGTATTGATGTTTTTAGTCCACCCGATGCCAGACACACA TTTTGTTCTTAGGGCTGTATCGGCCAGCTATAGGTAAGAAACTTATCCAC CGCTGAGCTGTGTTTTCACCCCCAGTTTTGAATGTTCGGGGAGAATATTT AATATTTTGGTTTGTCTCCCTCGCGGCCAGGTACTACTGCTGTAATGCTG CGCTCGTTCTGGCACATAGTTGCACCTGTTGCTGAGAAGGAAATAGAGCT GTCACGAGTCCAGATGATGCAGATAGAGTGAATAGATGGCGAGATGTTGA TATTTGGCAGCCTGCTGATAGTCGTTGTGATGGTTGACCGCGACAGAATT GATGCTTCCAATCATTCCCGCGGGTTTTCCTGTGTTCTTTTCTTCGCTAC CGGTGGGTCTTGCTTTGCAGGGCGAAAACTGTGATGGTCTGAACGGTTGC AGATGCCGAGAGGGTGTTTTCCATGTATTTTTGCACGTTGATCGTGCTGT AGATGATGTTGAAATTCGCGCATTCGGTCATCCTTCTCACCAACGCGTTC AACAACTCCGGTGCGACCGCACTCCCCGTACCGACTATTTTGCGGTCAAC CTAAAATGGTTGCAAT
back to top

Coding sequence (CDS) from alignment at Scaffold_129:21720..29935-

>EsuBft1715_3a-0001 ID=EsuBft1715_3a-0001|Name=EsuBft1715_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1083bp|location=Sequence derived from alignment at Scaffold_129:21720..29935- (Ectocarpus subulatus male Bft15b)
ATGCTCTCGATGTCTAATGGGGCCCGACAAAACTGCCATTTTTCAACGGC
TTGCGGCGTCACTCGCGCAGGGACAAGTTTGCGCGGCGTGGCGCAGGCCA
AGGCTAGGCCGGTCTCAAGGACGATGCGCATGGCCAACTCCCAGCGCCTC
GGCGACCCCATTGGACAAATGCTGGACAAGACGGACGTCTTCATCTTCGA
CTGTGACGGCGTGATCTGGAAGGGCGACAGCCTCATCGAAGGCATACCCT
CCGTCCTTGACCGTCTACGACAGGCTGGAAAACGGATATTCTTCGTAACG
AACAACTCTACCAAGAGCCGCAAGGGTTACAAGTCCAAGTTCGACTCCCT
CGGGTTGAGCGTGGAGCCCGAGGAGATTTTCTCATCGAGTTTTGCGGCCG
CGGCATACCTAGAACAGACAAGGTTCAAGGACACCGGGAAAAAGGTACAC
GGCGGTGCTAGAGTATCAGTGAAGTATGGACAGGACGTGGGCGCGAAAGT
TGGAGGACAAGCAGATGCAGGCATCGAGGAGGAGCTAGACCTCATCGGTG
TGCCTCACTTCGGGGGACCCTCGGACGGGAGTAAAGGGGTGGAGCTCAAG
CCGGGCTTCGCCCTCCCGCACGACGAGAACGTGGGAGCCGTGGTCGTCGG
GTTCGACAGGATGATCAACTATTACAAGATTCAGTACGCCCAGCTGTGCA
TCAACGAAAACCCCGGGTGCGAATTTATCGCCACCAACACGGACGCGGTC
ACCCACCTCACCGACGCGCAGGAGTGGGCTGGGAACGGCGCGATGGTCGG
AGCCATCAAGGGATGCACCGGGGTGGAGCCGACGATCGTAGGCAAGCCTG
GTCCCCTGATGATCGACTACATCATCCAGAAGTACAACGTTGAGAGGTCG
CGCATTTGCATGGTCGGCGACCGCTTGGACACCGACGTGCTTTTCGGAGC
CAACAATGGCCTGATGAGCATCCTCACATTGAGCGGCGTCACGACCGAGG
AGAAGCTGCTTAGCCCGGAGAACAAGATCAACCCTGACTACTACGTAAAC
AGCATCAACGACTTCTTCCCTTACTACACGTAG
back to top