Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1631_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 183 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-10_002270.1 |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1631_6a-0001 ID=EsuBft1631_6a-0001|Name=EsuBft1631_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1834bp|location=Sequence derived from alignment at Scaffold_265:7727..14297+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCTCGCCAGCGGTAATCCTACTCGCTTCCGTAAGGGTTGTGGAGGGTGG
AAGCACTGTTTGGAAACCCACTACTCAACTGGTTCCAAGCCCTTGATGTG
GTTCGAAGCGTGGAACCAAACGATTCAACCCAAGTTGGATCATCTTCTGG
TCACGTCTGGAGAGCAGCAGGAGGGCTGGCCAAAGGAGAACGGTATACAA
TTGATTTTCTCTGGAGACTCCACGTTCAGGCAGCAGTTCGAGGTTCTCGG
GGAGTTCCTGAAGCTTCGAAGTGATTTCCAACCGGTCGCTGGAAACGCGC
AGGCCTACGAGATGACGTTTGGCGCCCCGAGACATACTCCCGGGTCGGTA
ACGTTCCTGCTCATGCCGATATACGAAAAGTGCCTGCTCGCGAAGGGAAA
CCCGTACGTGGCGCAGGCCTACGCGGTGTACTTCGGCTGCGGCATGCACC
TCTTACACCTGTTCCCGGTGCAGGAGTCGGCCGACGTGCCGCGAGCAATG
CTCAGGCGAGTCTGGGAAAACTACGACACTCTTCTATCGGAGCGCATCGG
TGGGTGGCGAGAGGTCAATCCCGACATCAAGCTTGTCTACATGACCACCC
ATACCATCGACGAGAGCAAGTACTACGGCGAGTGGAAGACCGCGTTGGAG
GGGTACAAGGCGCGAGATCCTGCGTTTCTGGAACCATGCAAGTCGAAGTT
TGAAGAGATTCTTCCCCCGGAGTCCCCCTTGCGAGATGATCTTGAGCAAG
TTTGCATCGACACTGTTTTTGGGGCGCATGGGGTTCAGCTGCTCAACGAG
CAAGGGTTGGCACTGATGAAGGAAATGGGGGTGCCGGTGGTGCCGGCGCA
CATGCTCGTGGAGGGGCAGCAATGGGCAACACCGGACGGGGACGGGCGAC
ACTTCCCGTACCTCGTACCCCTGGAACTCTTCTGGCTCTTCAACGTCCTG
GAGGGTTTGTCATGATGTTTGAAGGTTCCGGTGACGCCCCATTTCTCGCT
CCCGCATCAAGGGTTGGCTCGTTTGTGCGGCGAAGTTGCTGAGAGAGCTG
GCGAACTGTGTTCGGAGCATGCGGCACGATCGTATGACAGTGGTATTGAG
AAAAATCGTCGATGTTCTACCACATGCGCATCTACCCCGTGCACCGTTAG
CGGTCCAAGCCTGCAGCCAGTCGTGGGGGCTAGATGCTAGTAGCAGCCGT
GGGAGAGAACATCTGCTGTGATCCATCCAACATATGTCTTCGAGCCAGGG
GGCGGAACTGAATTAGACTTGTATAACTCTTCATTTCCAAGGTTCACTGG
GAACCCACTGGAAAATTCTCTGGGGCGCTGAGAGCGCGCCATTTCGGCTC
TCCCTCGGGCACTGTAGCGGTATCCATCGCGGAGTCCCCTCGTAGATATT
GATGTTTCGTGTAGTATTTTGACGATGAAAACGATTGCGTGGACGGACAA
CGGGGCGGTCTTCGACGTTCAGGGAGGCGAAATTGGAGCGACAGTTGTAC
GCCCGCGAGTTTTTGGGAAACTTGATGGCCCACTCGTCGGCAGCGGTGTA
CATTTCCTTTATCATCGGCGGGAGTGCCGGAAGACGCAAACCGTTGCTGT
CCCGTACTGTATCAATAATTGCTCTAGGTACGTGCGTGCAACGACAGTTA
GCTGCGCAAACCCTTATTCGCCTGCGGTAGGTCTGAAGATACGGTGAACG
TGAACTGCGCGTCTATGTTGGATGCGGTGGATCATTTTGAACGTGTGTCG
GCGTTGATCATGATGGCGGGTGCGGGTGATTGAACAGGGGTGTTTCACAG
AAAAACTAAAATAGAGGGAAGCAAATGTGAAATT back to topprotein sequence of EsuBft1631_6a-0001 >EsuBft1631_6 ID=EsuBft1631_6|Name=EsuBft1631_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=289bp
MWFEAWNQTIQPKLDHLLVTSGEQQEGWPKENGIQLIFSGDSTFRQQFEV
LGEFLKLRSDFQPVAGNAQAYEMTFGAPRHTPGSVTFLLMPIYEKCLLAK
GNPYVAQAYAVYFGCGMHLLHLFPVQESADVPRAMLRRVWENYDTLLSER
IGGWREVNPDIKLVYMTTHTIDESKYYGEWKTALEGYKARDPAFLEPCKS
KFEEILPPESPLRDDLEQVCIDTVFGAHGVQLLNEQGLALMKEMGVPVVP
AHMLVEGQQWATPDGDGRHFPYLVPLELFWLFNVLEGLS back to topmRNA from alignment at Scaffold_265:7727..14297+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1631_6a-0001 ID=EsuBft1631_6a-0001|Name=EsuBft1631_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6571bp|location=Sequence derived from alignment at Scaffold_265:7727..14297+ (Ectocarpus subulatus male Bft15b)
GTCTCGCCAGCGGTAATCCTACTCGCTTCCGTAAGGTACTCCAGCAGAGT
GAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGCGAGATAGAGAACGACCGAGAGACCACCCCTGACCTTGAGCCCAACG
CGCGGTGGACTCTACGGCAGATCGCCCTTTCACCTCATAGGAGTCCACTC
ACAGCTGACTCCTCTACATATGGTATGCATACATACGTCCGTGTCCCCGA
AACTTCCCCGCAGTTTCTTCAATCCAGCGCCACAACCCCCTGATTTCCTG
TGTTCAATCTTTCACACGTTTGTGCGTGAGAGGGAGAGAGATAGAGAGAT
AGATAGATAGAGAGAGAGAATATCTGCTGTAGGTAGACGTAGTTAGACAG
GTCGAACGGGTCTGGGGGGGGGGTTGTTGGTTCTGGACCGGAGTTACCTC
TTATCGGGTTCTCTTCGTGTGGTGTGGTTTGACGCGTGACAGCCTCACAG
CAGCACATAAGTACAACTAACTGTAGTTGAAGATAAAACAAACCGCGTCG
TCCAGGCAGACCCTCGTGGATCGCAAACATGATGCAAGCTATGTTTTCGC
TCGTCCATTTCAAAACCGGTGTAGTGCTGTTCCAGACATCTAGACTTGTA
CTTGAACGTACGTAAAAGAGAAAGCCCACAATTCAAAATCCCGTATTGAC
AGCCGCCGGCGTTCACGCCGGAGGGCACAAATGTGCCCAAGCAAAGATAC
GGCAGTGGGGCGAAGGGCAGACTCTGCTGTTGATGTGCCCATGTTAGACA
CCACCCAACAGAATCGAAATGACAAGAGGAGTACTCCTCTCCTCACCATG
CGGCTGGTCCTTTTTTTGCTGCGTTGCGCTCACGTATGTAGATGTATGCA
GTTGCTTTTAGTACGAAATCGGGCAAAAACAGGTGCAGAAGCAGCCTCTC
TCACACGAGTCTTACTGTCGAAGCTACACCTTTTTCTCGCGTATAGCGGA
TATATTCTGTGTTGTTGCTCATGTGTTCAGAACCTGACGTCAAACTTGGC
GTTAGCTGAGAGTGATTGGACACGCAAGATTCTCTGCGTACTCTCCCTCA
CTCCCCAGCAGTAGAACACCCGTACTTTTCTCCGTGATTTCCCAGGGGAG
TGCCTTTGGTGTATGAACAAAATTCAAAATTCAAAATTTCGAGAGGTGAC
TCTCAGGTGAGGAGGCCTTCACATTACTAGGTCAGGCAATGCGCTCTCGC
GACGGTCGTCATGGGTGATGTTGTACATACCGTGACAGCTCATGAACATC
TCACGAACAGATGTTATGAGAGCGCAAGGCTCGACCCAGTATTGTTCCGT
CCAGCGGGAGACGTACTCTGTAGCGCATCAGTGTGTATTTTTGAATGAAT
CTGCAAATAATTATCGGTTGGTTGGCAACGAAGTCAAACTACACATGTAA
TAATAATTAAAGTGGGGGCGGGGTGTTTGTTCTGGCATGACTATGTGATA
CTCCGACAGCCGATGCGCCAGTTTCCACTTGCTGTGCTCACTACTCTTGT
GTTCTCAGGGTTGTGGAGGGTGGAAGCACTGTTTGGAAACCCACTACTCA
ACTGGTTCCAAGCCCTTGATGTGGTTCGAAGCGTGGAACCAAACGATTCA
ACCCAAGTTGGATCATCTTCTGGTCACGTCTGGAGAGCAGCAGGAGGGCT
GGCCAAAGGAGAACGGTATGTCACGCTGGAGAGAGAGACACACACACACA
GAGACAGACAGGCAAACAAGCAAACAGACAGACAGACAGGCAGACAGACA
GATAGACACAAAGGCAGGCAGACAGACAGGCAGGCAGGAAGACAGACACA
CGGACAGATAAAAATGACAGAGGTGCAGAGAACCATAGGCTGGTAGGGAG
GAGCACCGTGGCACAACTTTCGCCGGAAAAAATGCCGTAACGGCGATACA
ATCGCGATATTGCGGGACAGCTTCCCTGTCGGTGTTTGTCAACCGCACTT
TGGATGCCATCTGGAAGCCTGAAATGCGGTTTTGGTATGAACAAACGCAG
AGCCAAACTCGCAGGAAAACCAGCCGACACCCCCCGAGATCACATTACAT
ATGTACTGGTGTCGTCTTGCGGTGTTTTCTCTTTGGTCAAGCCTGCTGTG
GCATTTTGGTCACCATGCAGAGTAAAACAACGCGGGTCGACCTACCGTGA
CGATGTTTTCCAACGATCCTCTTAGGTATACAATTGATTTTCTCTGGAGA
CTCCACGTTCAGGCAGCAGTTCGAGGTTCTCGGGGAGTTCCTGAAGCTTC
GAAGTGATTTCCAACCGGTCGCTGGAAACGCGCAGGTACGCTTGCAGCGG
ATGTACAGCAACTCCACGACGCTAAATAGAGTTTGTGGCTGTCGGTTGGC
ACAACCGCGGGGCATATGAGTGAAAGGTTTGTGCAGCTAGGTAGGGCTGT
AGGGTGCGAGAATAACATAACACCTCCCCACTGTATTCACCTGCGGTTCG
TGGTGTTCGTTCCTCACTGTCTGAACCCGAAGTACCCTTAGAGCGAATAG
GTCGTTTGGGGTCGGGCAGCAGCTGTTGTCCGTTCCGGAGGAAGTCCTAA
AACTCAAGGGCGCAGCTATCTAGACTGTCGGGGTTGGCTAAATAGGTTCC
CAAGGCGCGGACACAAGACTATCTATCCGTCAGAGACGAAAACCACATGG
CATCGTTGCGTGGTTAGACTGTTCTGCGTCTGTCTTGTCCATTGCCAGCC
GACAACAGGTGCAAAACGCGCCGCTGTTCTCTCGAGATTCAGATCGTATG
GCATTGTAGCAATGTTTGGTGTCCCTCCCAACGCGGCTTGTTCCGCGTTT
GTTTCGCCGGGTACTCCCCGCGGCCGCACACTCGCAGGCCTACGAGATGA
CGTTTGGCGCCCCGAGACATACTCCCGGGTCGGTAACGTTCCTGCTCATG
CCGATATACGAAAAGTGCCTGCTCGCGAAGGGAAACCCGTACGTGGCGCA
GGCCTACGCGGTGTACTTCGGCTGCGGCATGCACCTCTTACACCTGTTCC
CGGTGCAGGAGTCGGCCGACGTGCCGCGAGCAATGCTCAGGCGAGTGTAC
CTGTCCCGTCGAGGACAAGGCATCCCCGCGAACATCGTATCACGCGGTCT
CAATCCGTACATCAGTGCAACAGTTTGCACAAAGAGTACAGCGACAGCTT
CTAATTTTGAGCGTCAGCGTCATGCATGCTTCAATAGAAGCAAGTTCTCT
CTCTCGCTCTGCTTCTCTCTCTCCCTCTGTTTCTCTGCGTGTTTCTCGGA
AAAGACACGCACCAAGAACGTTCACCCCGACAGCGGGTTCGAACGGGAGC
CGCCCACTTGCCGGGCAACCCTAAGTGTAGGTGTCCTGTACCCGGTTTGG
GTGTTTTGCTGGCCGGGGGGCATAGTCCTCCGTCTGTGTATTTGTGTCAC
ACATCCTTCGTGCCTTCGTACGCATGTGTACGCGTATACCCCTCCGGGTA
ATGGGGTGTCTTTTTCTGACACCGAACTCCCCCCCCCCGCCATCCGCCGT
TCCGATAAGTCAGCTGGGAAAACTACGACACTCTTCTATCGGAGCGCATC
GGTGGGTGGCGAGAGGTGAGCAATGCACGCTAGATATATCGCAGGCCTGG
ACGTAGTAGGTAGCATTCGAAGAACCGGTACATGCAGTTCGAGCACAGAA
AGCGTTGGCCTTCTGGCCAGTCACGCGCGCAAATGATAAAATGTGCAAAT
TGGATCAACCTAGAAAATACTGCGAATATGTGTTGTGTCTCGGGCGTGAA
AGCATCACCGCAGGAAAGTCCAAAGCTGGGCCAAAAGACGGAACATCGGA
CGGTGCATGTTTGCGCAGATTCCAACACTTGGCTATTCTGCGCCTTCTAC
GCTCGTCGGAACGATATTGATCTAGACTATTTATATCTTCAGTGCAACAT
ATTCTGTCGCTTTGGACCAAACGCACATCTGACCTGTGCGTTTGAAACTG
CTAGTGAGCGCCGATTGCTGGTGAAGGTGTCGATCTTAACTTCGCGGACA
GCCTGCCGGGAAAGTGTGCTATGCATTCGCATTTCGTCCGGTTTCCGCTG
CTTCTTGTAGCTGACTGGGTTGGCACTCGCAGTCCTCCCGTGTTTTGGTC
GCATTGACAATATTTTTCGTGCGGTACCTGGCTCGGGCCGCCAGGTTCTG
AATGTCTCCCAGGGATGGCGATCATAGCTCGTTCATGCATGCACCCGTGC
CATTTTGTTTTCCATTAATGTTGCGCCGGCCATGCTTTGGACTTTCGCAC
GCCACAAATTGTTGTTACTGAAACTGTAAGGTCAATCCCGACATCAAGCT
TGTCTACATGACCACCCATACCATCGACGAGAGCAAGTACTACGGCGAGT
GGAAGACCGCGTTGGAGGGGTACAAGGCGCGAGATCCTGCGTTTCTGGAA
CCATGCAAGTCGAAGGTGTGATGGACCTGCTTTCACAGTTGTGGGGTTGT
TGCTTGAATCAGGAATAGCTCAACCGAGTGACATAATTTGTTTGGACCCT
GGCATCGCGCTGAAAGGCGCCGAAGTTTGGCGAATAGAAGCGATCGGTAA
TGTATACCATGGTAGCTTTTACAGCTTTCAAGAGCCCAGCCAGACCCGCA
GAGCGATTGCACCACAACATGCTCGAAGCTCCCTAATTATCACCCCAGGG
TGTACGCATCGGTATATAGCGGCGTTCACTTGTAATGGCGCCGGGTTTTC
AAACGAAGGTGCATGATGGTGTGTGACTCTGGTAAACCAGTAATGCTCCC
TGGTAAGAAGGGGTCAAGGTTTGGGTTTCTCGATGGCTGATGCGCGCCCC
CCATCTCCACGCGACCTACCTGTTGTTGTTAATTTTCCCTACACCGAGAA
TGTCTCCTGTTGCCCCAGTTTGAAGAGATTCTTCCCCCGGAGTCCCCCTT
GCGAGATGATCTTGAGCAAGTTTGCATCGACACTGTTTTTGGGGCGCATG
GGGTTCAGCTGCTCAACGAGCAAGGGTTGGCACTGATGAAGGAAATGGGG
GTGCCGGTGGTGCCGGCGCACATGCTCGTGGAGGGGCAGCAATGGGCAAC
ACCGGTGAGCGCACGTCGCGTTGTTGTTGTCTTCACGTTAAAAGCCATCC
CGATCTCTCCACCCCGAACCCCCCTTTGTCCGTACTGATTCAACCAGACA
TGGCCAATCGCCGTGGTCGATTCCCGTGGTCAGAGGTTGACTTACTCAAA
TAAGGGATTAATAAAAATATTGTGGACCTGAAGGGTCAGCAGACGATAAA
ATCAAAAACAAAGAGTCTGTAGCTTTCTGCTCGCCTCTACAAGCTATGCG
AGTCAATGCAGACATGTTTTAGCGCAAGACTCAAGGTTCGGCAAATTTTA
CCGGAGAGCGCTATGTAAGGTCTCCCCACGCCGTGGCTCACACCCCTCGA
CAATGCCTCAATACCCTTCGCAGTTAATACGATGCGTGCCTGGGAGTCGA
GAAGCAGTAATTGTGCTCCAACACGCCACGGTATGGGGGTGCTAGGTTGT
GGTCTGAAACGTCGGCCCTGCTTGCGTCTGAGTTCCCCCGTCCCCAATCC
ACCCGCCGTTCTTTTCTTTAGGACGGGGACGGGCGACACTTCCCGTACCT
CGTACCCCTGGAACTCTTCTGGCTCTTCAACGTCCTGGAGGGTTTGTCAT
GATGTTTGAAGGTTCCGGTGACGCCCCATTTCTCGCTCCCGCATCAAGGG
TTGGCTCGTTTGTGCGGCGAAGTTGCTGAGAGAGCTGGCGAACTGTGTTC
GGAGCATGCGGCACGATCGTATGACAGTGGTATTGAGAAAAATCGTCGAT
GTTCTACCACATGCGCATCTACCCCGTGCACCGTTAGCGGTCCAAGCCTG
CAGCCAGTCGTGGGGGCTAGATGCTAGTAGCAGCCGTGGGAGAGAACATC
TGCTGTGATCCATCCAACATATGTCTTCGAGCCAGGGGGCGGAACTGAAT
TAGACTTGTATAACTCTTCATTTCCAAGGTTCACTGGGAACCCACTGGAA
AATTCTCTGGGGCGCTGAGAGCGCGCCATTTCGGCTCTCCCTCGGGCACT
GTAGCGGTATCCATCGCGGAGTCCCCTCGTAGATATTGATGTTTCGTGTA
GTATTTTGACGATGAAAACGATTGCGTGGACGGACAACGGGGCGGTCTTC
GACGTTCAGGGAGGCGAAATTGGAGCGACAGTTGTACGCCCGCGAGTTTT
TGGGAAACTTGATGGCCCACTCGTCGGCAGCGGTGTACATTTCCTTTATC
ATCGGCGGGAGTGCCGGAAGACGCAAACCGTTGCTGTCCCGTACTGTATC
AATAATTGCTCTAGGTACGTGCGTGCAACGACAGTTAGCTGCGCAAACCC
TTATTCGCCTGCGGTAGGTCTGAAGATACGGTGAACGTGAACTGCGCGTC
TATGTTGGATGCGGTGGATCATTTTGAACGTGTGTCGGCGTTGATCATGA
TGGCGGGTGCGGGTGATTGAACAGGGGTGTTTCACAGAAAAACTAAAATA
GAGGGAAGCAAATGTGAAATT back to topCoding sequence (CDS) from alignment at Scaffold_265:7727..14297+ >EsuBft1631_6a-0001 ID=EsuBft1631_6a-0001|Name=EsuBft1631_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=870bp|location=Sequence derived from alignment at Scaffold_265:7727..14297+ (Ectocarpus subulatus male Bft15b)
ATGTGGTTCGAAGCGTGGAACCAAACGATTCAACCCAAGTTGGATCATCT
TCTGGTCACGTCTGGAGAGCAGCAGGAGGGCTGGCCAAAGGAGAACGGTA
TACAATTGATTTTCTCTGGAGACTCCACGTTCAGGCAGCAGTTCGAGGTT
CTCGGGGAGTTCCTGAAGCTTCGAAGTGATTTCCAACCGGTCGCTGGAAA
CGCGCAGGCCTACGAGATGACGTTTGGCGCCCCGAGACATACTCCCGGGT
CGGTAACGTTCCTGCTCATGCCGATATACGAAAAGTGCCTGCTCGCGAAG
GGAAACCCGTACGTGGCGCAGGCCTACGCGGTGTACTTCGGCTGCGGCAT
GCACCTCTTACACCTGTTCCCGGTGCAGGAGTCGGCCGACGTGCCGCGAG
CAATGCTCAGGCGAGTCTGGGAAAACTACGACACTCTTCTATCGGAGCGC
ATCGGTGGGTGGCGAGAGGTCAATCCCGACATCAAGCTTGTCTACATGAC
CACCCATACCATCGACGAGAGCAAGTACTACGGCGAGTGGAAGACCGCGT
TGGAGGGGTACAAGGCGCGAGATCCTGCGTTTCTGGAACCATGCAAGTCG
AAGTTTGAAGAGATTCTTCCCCCGGAGTCCCCCTTGCGAGATGATCTTGA
GCAAGTTTGCATCGACACTGTTTTTGGGGCGCATGGGGTTCAGCTGCTCA
ACGAGCAAGGGTTGGCACTGATGAAGGAAATGGGGGTGCCGGTGGTGCCG
GCGCACATGCTCGTGGAGGGGCAGCAATGGGCAACACCGGACGGGGACGG
GCGACACTTCCCGTACCTCGTACCCCTGGAACTCTTCTGGCTCTTCAACG
TCCTGGAGGGTTTGTCATGA back to top
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