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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1546_7 |
| Protein domains | PTHR32134 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 196 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1546_7a-0001 ID=EsuBft1546_7a-0001|Name=EsuBft1546_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1963bp|location=Sequence derived from alignment at Scaffold_170:94243..100319- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AGGCAACAAGGTCTGGACAGCCCCCAGACCCTGATATTTTTGTGGTGCTC ACGCCCTTGATCAAGAGCGAAGCTGCCAAGGAAAGGATAGGTGGGTTCAT CCTAGTGAGGCAATCCTTAACGACATCTACCATGGCGGCAGTCGCTATGG AAAATTGGTCGAGTGAGGAGCACATGCGAGACCGTGCGCTTCGAGGATTG CAGGTCGCTGTTGTTTCCGGCTTCATGAAGGATTGTCGGTCCGTACAAGA ATCTTGCCTGGGCCTATGCAACGCGTGTCGAGAAGGGGTTCCAGTGGAGC GCATGCTTGTCCGCGAATGGGTGCCGCAGATACTCCTGGCAATGGTCCTC CCCAATGCCGTTCAAGCGCAGCGGGAGGCCGAGATCCCACCAACGAGAGT CCTGCACCCTCGCAGGGTGCTCAGGTTGGAGTGGACATTCCGTAGCCATG CATGGTGGGCTGAGTCTACCGGACAGGTTCCTAAACCTTCGGCAGGTACT CCAAGCGTGGGCGACGTCGACTTTAACGAGGTGCAATGGCCCGAAGGCAC CAGGGAGATTTCCTTGATTCTATTCGACAAGCCGGTGGAAGGGATGGCGT GGCCGTTGGGTCTGGAGTGCCTATCATTCTGTGCCCTCCGATCTGGGTGC GGGGCTTGGCACGTGTCAGATAGAGGCTCATTCAATCGTTCGCTTGTTGG GGCGAATTTTCCTGCGGGTCTGCGGGAGATCTTCCTTGGGGATGCTTTCG ACCAGCCCATCGAAGACGTTGTGTGGCCGCAAGGGCTTGAGAGACTGTCC CTCCCTGGCTGCAATCAGCCTGTTGACAACGTGCGGTGGCCGCCGGCATT GAAGTCCTTGGAATTTACCTCGCCGTTGCAGATCTGCCTCCGCGAAGACC CAAATACGCGTTTAGACGAGCTTGACCTTGTGGGTGTCTTCGACTCCCCC TTCACTACTTTGCCAGCGAGCCTCGAGACTCTTTGGCTTGGTGACGAGTT TGGTCAGTCCCTTGAAAGCGTGAACTGGCCAAGTGGGCTTGTTACTTTAG GGCTTGGTTGTAGTTTTGAAGAGCTGCATCGCGGTGTTTCGTGGCCCTCG AATCTTCGAAACCTGTACTTGGTGAGAGAGGTCGATTGGGTAGAGCGCCC CCCTTCCGGCTGTAAGGTGACTGTCGTGAAGGATGACCCGGATGATGACA TGTACGACGTGGACTACGATGACCTCTACGATGGCGCACCTGTATACGAT GTAGATCACGACTACCGGGTCGCTTTCAAGGACTACTATGAATTGTGACC AAGATGTGACGCACTTTTGTCCAGTGCTGAATGTGGTAAGGGAGATTCGT GGTACTAGGAAAAGTGAGCAATGCTGTTATTCTCGGACCGTGTTCGTAGG AAGGTCTTGTACAGTAGGTCGAGCAAGGAGTTTCTTCGTTGTTCGGTCAG CTCCGTCTTGGGTTGCGGTCTAATTACACATGATTCCATGATTGAGTGCC CATTAATGCTGTTAAAACAGGCGGCGAGCATTGTCACGGTCGCCCCGGTA GTCTATGATTGTTGGTACCCTCAAAAACCTTGCAGTGGTGGGCTTCAGTG GTTCGAATCCCGGCGTGAGCAATCTTTTCTTGCACAGTGAGTTTTTCGCT CGCTTCAGTTCCTGGCCTGGGTGGAAAGCGCTGTAATCAAGTACACCGAG AAGATAGTGCTGCACTATCGAAGGCAACGCACCGCAGGAGGGGTGGCTGG GGGACCTCAGGGCGAGGAACTCTCGGTGACCATGGGTTGGAGAAAACGGC ACAAATGCTGTGAGCACCGGTATGAAGTGAAGGCCCGCGACTAATTCCTC CAGAGTTTGAACCCTACCGTTGACGTCTGGGCCATCGCATTCAGGGTAGT TGGCATTTTCAGTTACGGGCAGAACAGGGATGAAAAGTCTTACGCTTGAG TATGCGCAAAAAA back to topprotein sequence of EsuBft1546_7a-0001 >EsuBft1546_7 ID=EsuBft1546_7|Name=EsuBft1546_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=388bp
MAAVAMENWSSEEHMRDRALRGLQVAVVSGFMKDCRSVQESCLGLCNACR EGVPVERMLVREWVPQILLAMVLPNAVQAQREAEIPPTRVLHPRRVLRLE WTFRSHAWWAESTGQVPKPSAGTPSVGDVDFNEVQWPEGTREISLILFDK PVEGMAWPLGLECLSFCALRSGCGAWHVSDRGSFNRSLVGANFPAGLREI FLGDAFDQPIEDVVWPQGLERLSLPGCNQPVDNVRWPPALKSLEFTSPLQ ICLREDPNTRLDELDLVGVFDSPFTTLPASLETLWLGDEFGQSLESVNWP SGLVTLGLGCSFEELHRGVSWPSNLRNLYLVREVDWVERPPSGCKVTVVK DDPDDDMYDVDYDDLYDGAPVYDVDHDYRVAFKDYYEL back to topmRNA from alignment at Scaffold_170:94243..100319- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1546_7a-0001 ID=EsuBft1546_7a-0001|Name=EsuBft1546_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6077bp|location=Sequence derived from alignment at Scaffold_170:94243..100319- (Ectocarpus subulatus male Bft15b) AGGCAACAAGGTCTGGACAGCCCCCAGACCCTGATATTTTTGTGGTGCTC
ACGCCCTTGATCAAGAGCGAAGCTGCCAAGGAAAGGATAGGTGGTGAGAG
AGAATATTTGTCAATGGGTCCTCAAGTTCGTTGATATCGATCCTCCTCCT
GTCCCCATGGTTTAATGTACTACTGCAGTATCTCAAGCTCCTGTGTCGGA
ATCTGCAGCTGTAGCAGCTGGACACTCCTGCCACAGAGAGTTGAGCTGCT
ACGAGATGGCGGGTGCACGCACTTGACTTGCCCCCAACGTCAACTTTGTC
CTGTGTGTCGTGTAGACCGAATGCTGTAGTGACCATGGATAGGAGCTCCT
ACCCGACAATAAGGCTGCCCGTGAGACAATAATATTGGGCGTTTCGGAAC
ACTATTTTTTTGGGGTCAGACAAATGGCCCAGACAAACCAAGGGTTCGGA
TGTTCGGATAATTTTTTTTTTCACTTATGGAGCAGGAAGTTGCTATAAAA
ACTGCAGTTCTTATTGCAACTTTTGGTCGGGAACTTTTGTCGATGGAACT
TTGGTGCACGCTCTTTGTGGGACGAGAACGTGTTGTGCACAGGACTGGCG
GAATGCGGAGGAGTGATTTTTTTTTGTTTAGCAACGCCGAGAAGCGGGCA
CAACGCTTCATACCACACCGCGAAGAAACCGATCAGAGCATGCGGGAGAG
TGCAGTTGCAACTTCTTTTCCACGCTCACGATACCCCAAGGCATCTATCT
ATCCTGGTACCAGAAAGATGCGGGGTAGAGCTACCTCCCCCGTCATTGCT
GTTAGTGGCTGTTGCCTTCTCCTTCGAAAAGTTGTCGCTGGAAAACCAAA
CCATGAGCACACAGTCCCCACGGACTTGAACCAACCGCTCTTTAACGTCA
GTATTTTATGGTCAACCAAAACTTTATTTCCGACGCGCACGAACGATACT
CCACGGCACCAAACCTTGGACATGAAAAAGGGAGCAGAGAACTACTTCCC
GCCGAGTGGCCTTGCTATTGTTGTTGCTTCCTCCTTCGGAAAGTTATCGG
TACAAAACCAAACCCGTGGCGGTCAATAACACCGAAATCGCGGCCGTGAC
GGTCGCGCGTCAGCACAAACTTGTTTTCCCGGCGCATTCGGCACCTCACG
GTGCCAAACCTTGGCAAAACCCCACAGCCCATGACATCACCTCCTTCCAG
ATACCATTCCTGAGGCAAGTCGTAAAGCATTCGTCCAGGTATCAGTGAAC
ACGGCATTCCTGATCGAAGCTGGAGAGAGGGTTTACGTGTGTGTGGTAGG
GGTAGCAGCTTGACGTGGATTGGTGGAAGTCTCGCCGCGCAGCTTTGTTC
GACACCTTCGTCGCGAAGCAAGCTGCAGAACTTTTTCTCCAGATTGCAGC
TTTTTGCTCCAGAGAAGAAGTTTCAAAACTTTTGCGCAACAGCCACAATG
ATCGTACTTGAGAGAAGTTGCAAGCAAGGTTTGAGAACTCTGACTTTTTT
CGCAATATTCTGCTCCAAAAGTAACAGACGGCGCTATTTCGGCCCACCGC
TCAGATTAACACCCATCCTCTCACCACCTTCAAAATGTCTGAGGCATGGG
TTGCTGTTCGACTGCCTCAGATTCTCAGCGGAAAGAGTAGAACCACAAAA
GATGGCATCGCAGGGTACAGACTCGTCCGAGCCTCATGTTACCACCACTA
GCCAGACTAGCTCCTGCGATGTGGAAGGTGTGTGTCTACATGTTTGTGCC
TGGTGAAGGGACAGCGCTCTCTATGGAATCGATAAGGAAGGAAGGGTGGA
ATGAGACAGGGTTCACAAGGCGTGAAAAATAGAGCATTATTCTTGCCTAC
AACCAGCTCAGGAGAACACGCAGACCCATGAGCTGTAGGTGACTCGAACT
GCTGGGAGGTGGCCCAAAAGTTGCCGTACTCTCTATCGGCGCCACCTCCT
CTAGACAGCTGTTGGGGTTTGAATCCTGCTTAAATCATCGCCGTGGGAGG
GCGATTCTTCCAGGTTGAAGCTGCTGCCTCTCTCGGTCGCTTGATTGAAA
CAAGAAGCCACCTGAGCGGCTGAGAGTATGCTTGCAAGAAGCCTTGAGGG
TGTTTTTCTGCGGTGACAACACCACAGCTAGATGCTTCTGACACCTTCAA
TGTTAAATTGCAGTAGGCAACCAAGCAACAACAACAACCTGTTTTTCTTT
CTTGTGTAGACAAGGGAAGCGCGAGTCTTTCGGCCAATTAGGGGGGGGCA
GATATGACGGTATGCCGAATATTAATATGAGCCTCTTTTCGGATCTTTTA
AATGCCAATGTTTTCTGGGCAATTTTGTCTGGGCAAAACAAAATGTTTTT
CCGAAACTCCCCAATGTGAGAGTGTGCTAACGAAAAAAAGAGTCAGCGCA
GACCTTCTTTTTGTGGAGGTGCAGGGGGGGGAGCGGCTCGATGCAAGCAA
AATAATCTCCGCTGCAAGAGGGTTCTCGCCAACTACGGTATCATAGTAAG
GACAAGTCTGGACCCCATGCATGAGGACGCCAACAACGACCTTCCAGCGT
GGGAAGTCCCGATCTGAGCACACGTTCAAGTAGAGGACATCATGGAAAGC
AGCGTGCGCTTTGGCACGCCCAGACCTGTTGCTGGGGCTGTGTGTCGAAG
GCTGCAGCGGTGTTGTTCCGAAAATCCCGTCAATCTGGGTCCATACTATT
CACCATTCCCTGCTGTGCGCTCCGGAACAGACCAATCACCCGAACTGCTG
GTCCTAGGTAGCTACTGAGTTGACTGCCTCTGCTGTAGAGCACCAGCTCG
AGGGCCTAGATCTGTGACGGCGTATACAGCAAGGAATCGTGAACGGAACA
GGGGACCAGACTTGCGCGGACATTTCGGACCAAAGCTGCAGCCAGCGACA
GCACGCCCCCAGCAATATATCTGGGCGTACCAATGCGCACGCGGCTTGCT
CCATCATGTCTTCCTGAGACTGGAAAATGTGCCCGCATCGGTACTCCGCA
ACGAAAAAGCATTAAATTAAGCCCTCGTGTCGTCTGTTTCGTCTCGGTTT
GAGAAGGTGCGTGGAGGTCGACTGACTTTGCGACAGGCCCCAACCGTTGT
CTTGTGTCACAACTCACGGATTTGCATTTGCACAGCACTGAAGGAGTGGG
CTCATGTGTCTTGTATGTCATCTGCCGAGTGCTAATTCGGTCGATTTCGA
AACCGCTCAAGATCGAGATCGGTTGGCAAGAACCCCTTTGTTACATGGCT
TTCTTTGAAACCCCGAATTTTTGGTGGTGAGGCGTCTTAAGGGTTTCAGG
GGACGACACCGCATCATCCCCGGCGTCAATGGAGGCATGTTATACGTCAA
ACGGTGTGTCTTGCCGAAAGAAGTGGTAGCGCGAAAATAGCCGAGCACAA
GCGATTTTTTTTTTTGCTGATGAATCTGGTGCTGTCGATGTTTCAATTGC
AGGTAATTGGTGCTTGAGCCCGGAACGGTGGGCTTACACTCAGATTGGCG
GACTTGTCCGCCGATCGAGAACGAACCAGTCCCTTTCCCATTGCAAATCG
CACTTCGTCATCCAGACCGAACACGCAATGACTTTGAAAACCTTGGACTT
TGATTTTGGTGCAACAAGGTGACGTTCTTGGGGCAGGGCCGGAATCTTTT
ACCGCGACAAGCGCGCTGCTGAAAGTGTTGGAACCTGCCCATACGATTCG
ATTCAGCGGGCATGAAGCCACTGCACCCGAGTTAATATGCGCCCCAACTA
TTCGTGCCATTCTGTCACCACCCTGTGGTCCCGGTTTCCACCTGAGAAAG
GACAATTTCAAGTCACACATGGAATTGTCCTGTCCTCCCGGCGACAGCGG
TGAGGTTACCGTGAGCCGGGTTCAGCAGTCCTCTCTCGCTCTTAATGCGT
CAGTGGAAACACTCTGAACTGCACACCCATGAACACGCCCTTCATGACCA
GCGTCAGGCCGATAGTTGTGCCGACAACCCCACCTGCCTCGGTTTCCGAG
AGTACGTACGACTTACCGCTGCCGCAGAGACTGACATTCGTAGACCTCAC
CATACACCGTCGCAGTCGCAGGAGTAGCAGCATTTGCCTATGCCTTACCA
TATAACCTGAGTAGAGCTCTTTTTGGGCTCCCCAAAATCTTGATCGCCGT
GGTTCAAGAGCCCTTACGTTGAATCTGCCCGGCCCCACCACGCCCTTTTC
GTCACAGGGTTCATCCTAGTGAGGCAATCCTTAACGACATCTACCATGGC
GGCAGTCGCTATGGAAAATTGGTCGAGTGAGGAGCACATGCGAGACCGTG
CGCTTCGAGGATTGCAGGTCGCTGTTGTTTCCGGCTTCATGAAGGATTGT
CGGTCCGTACAAGAATCTTGCCTGGGCCTATGCAACGCGTGTCGAGAAGG
GGTTCCAGTGGAGCGCATGCTTGTCCGCGAATGGGTGCCGCAGATACTCC
TGGCAATGGTCCTCCCCAATGCCGTTCAAGCGCAGCGGGAGGCCGAGATC
CCACCAACGAGAGTCCTGCACCCTCGCAGGGTGCTCAGGTTGGAGTGGAC
ATTCCGTAGCCATGCATGGTGGGCTGAGTCTACCGGACAGGTTCCTAAAC
CTTCGGCAGGTACTCCAAGCGTGGGCGACGTCGACTTTAACGAGGTGCAA
TGGCCCGAAGGCACCAGGGAGATTTCCTTGATTCTATTCGACAAGCCGGT
GGAAGGGATGGCGTGGCCGTTGGGTCTGGAGTGCCTATCATTCTGTGCCC
TCCGATCTGGGTGCGGGGCTTGGCACGTGTCAGATAGAGGCTCATTCAAT
CGTTCGCTTGTTGGGGCGAATTTTCCTGCGGGTCTGCGGGAGATCTTCCT
TGGGGATGCTTTCGACCAGCCCATCGAAGACGTTGTGTGGCCGCAAGGGC
TTGAGAGACTGTCCCTCCCTGGCTGCAATCAGCCTGTTGACAACGTGCGG
TGGCCGCCGGCATTGAAGTCCTTGGAATTTACCTCGCCGTTGCAGATCTG
CCTCCGCGAAGACCCAAATACGCGTTTAGACGAGCTTGACCTTGTGGGTG
TCTTCGACTCCCCCTTCACTACTTTGCCAGCGAGCCTCGAGACTCTTTGG
CTTGGTGACGAGTTTGGTCAGTCCCTTGAAAGCGTGAACTGGCCAAGTGG
GCTTGTTACTTTAGGGCTTGGTTGTAGTTTTGAAGAGCTGCATCGCGGTG
TTTCGTGGCCCTCGAATCTTCGAAACCTGTACTTGGTGAGAGAGGTCGAT
TGGGTAGAGCGCCCCCCTTCCGGCTGTAAGGTGACTGTCGTGAAGGATGA
CCCGGATGATGACATGTACGACGTGGACTACGATGACCTCTACGATGGCG
CACCTGTATACGATGTAGATCACGACTACCGGGTCGCTTTCAAGGACTAC
TATGAATTGTGACCAAGATGTGACGCACTTTTGTCCAGTGCTGAATGTGG
TAAGGGAGATTCGTGGTACTAGGAAAAGTGAGCAATGCTGTTATTCTCGG
ACCGTGTTCGTAGGAAGGTCTTGTACAGTAGGTCGAGCAAGGAGTTTCTT
CGTTGTTCGGTCAGCTCCGTCTTGGGTTGCGGTCTAATTACACATGATTC
CATGATTGAGTGCCCATTAATGCTGTTAAAACAGGCGGCGAGCATTGTCA
CGGTCGCCCCGGTAGTCTATGATTGTTGGTACCCTCAAAAACCTTGCAGT
GGTGGGCTTCAGTGGTTCGAATCCCGGCGTGAGCAATCTTTTCTTGCACA
GTGAGTTTTTCGCTCGCTTCAGTTCCTGGCCTGGGTGGAAAGCGCTGTAA
TCAAGTACACCGAGAAGATAGTGCTGCACTATCGAAGGCAACGCACCGCA
GGAGGGGTGGCTGGGGGACCTCAGGGCGAGGAACTCTCGGTGACCATGGG
TTGGAGAAAACGGCACAAATGCTGTGAGCACCGGTATGAAGTGAAGGCCC
GCGACTAATTCCTCCAGAGTTTGAACCCTACCGTTGACGTCTGGGCCATC
GCATTCAGGGTAGTTGGCATTTTCAGTTACGGGCAGAACAGGGATGAAAA
GTCTTACGCTTGAGTATGCGCAAAAAA back to topCoding sequence (CDS) from alignment at Scaffold_170:94243..100319- >EsuBft1546_7a-0001 ID=EsuBft1546_7a-0001|Name=EsuBft1546_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1167bp|location=Sequence derived from alignment at Scaffold_170:94243..100319- (Ectocarpus subulatus male Bft15b) ATGGCGGCAGTCGCTATGGAAAATTGGTCGAGTGAGGAGCACATGCGAGA CCGTGCGCTTCGAGGATTGCAGGTCGCTGTTGTTTCCGGCTTCATGAAGG ATTGTCGGTCCGTACAAGAATCTTGCCTGGGCCTATGCAACGCGTGTCGA GAAGGGGTTCCAGTGGAGCGCATGCTTGTCCGCGAATGGGTGCCGCAGAT ACTCCTGGCAATGGTCCTCCCCAATGCCGTTCAAGCGCAGCGGGAGGCCG AGATCCCACCAACGAGAGTCCTGCACCCTCGCAGGGTGCTCAGGTTGGAG TGGACATTCCGTAGCCATGCATGGTGGGCTGAGTCTACCGGACAGGTTCC TAAACCTTCGGCAGGTACTCCAAGCGTGGGCGACGTCGACTTTAACGAGG TGCAATGGCCCGAAGGCACCAGGGAGATTTCCTTGATTCTATTCGACAAG CCGGTGGAAGGGATGGCGTGGCCGTTGGGTCTGGAGTGCCTATCATTCTG TGCCCTCCGATCTGGGTGCGGGGCTTGGCACGTGTCAGATAGAGGCTCAT TCAATCGTTCGCTTGTTGGGGCGAATTTTCCTGCGGGTCTGCGGGAGATC TTCCTTGGGGATGCTTTCGACCAGCCCATCGAAGACGTTGTGTGGCCGCA AGGGCTTGAGAGACTGTCCCTCCCTGGCTGCAATCAGCCTGTTGACAACG TGCGGTGGCCGCCGGCATTGAAGTCCTTGGAATTTACCTCGCCGTTGCAG ATCTGCCTCCGCGAAGACCCAAATACGCGTTTAGACGAGCTTGACCTTGT GGGTGTCTTCGACTCCCCCTTCACTACTTTGCCAGCGAGCCTCGAGACTC TTTGGCTTGGTGACGAGTTTGGTCAGTCCCTTGAAAGCGTGAACTGGCCA AGTGGGCTTGTTACTTTAGGGCTTGGTTGTAGTTTTGAAGAGCTGCATCG CGGTGTTTCGTGGCCCTCGAATCTTCGAAACCTGTACTTGGTGAGAGAGG TCGATTGGGTAGAGCGCCCCCCTTCCGGCTGTAAGGTGACTGTCGTGAAG GATGACCCGGATGATGACATGTACGACGTGGACTACGATGACCTCTACGA TGGCGCACCTGTATACGATGTAGATCACGACTACCGGGTCGCTTTCAAGG ACTACTATGAATTGTGA back to top
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