Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft151_23 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 148 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_23a-0001 ID=EsuBft151_23a-0001|Name=EsuBft151_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1481bp|location=Sequence derived from alignment at Scaffold_392:332752..334819+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCTCGCAACATTTTTGCTGCCACCCCGCCTAGCTCCAAACGCAA
AACAGCCGAAGTGCTCGGGAAGTGTGCGCGGTGTGACAACGCCGAAGTCA
CGCGCTGCTCCGCGACTTTCGGCGGCTGCGAAAACTACAACTCCTCCGGC
TGCAGGTACAAGATCAGCATCCTCTCGGCTGCAGCGCGCTGCGTTACCTG
CCTCGCGGACGTCAACCCCGGCGTCCTTTGCTTGGGCGTGCCCAATCTCA
AGGGGACGAAGAACACCCGCGGCAAGACGGCGTACGTCAACACACACCTA
CGCTGGGAGGACTGTCTCGGGCAGAAGGTGAAACTAGGCAAGGAGGGAAA
GTCCGCCTTCAAGTTCATCGAGCGGGTCGATCAAGAGGACAGCAGGATCG
GGGTCCCGTGCGCCCGCTGCACGGACGAGATCGTCGAGGGAGACTTCGTC
ATCTCCACGTACCAGCCCGACGCTGAGAACCCTCTCCCGGCGAACAACCC
CCTCCACGCCAAGGGCTGCGCGCGTGCCGTCTTCGACGACAACCACGAGC
AGTTCGTGGACAACATGATGCTGGAGGGTATCTCCTCCGACAAGGTCGTC
AGCGCGGACAGCATCGACTTCGACTTCTGAAGTGAGTGCTGTGAGGTCTA
AATTTGGGCTTCTGTTCGGCACATGCCTCGGTCGGCTTTTGCGCCGCCAA
ATCATTCGGCTTTCACGCCACGTTCGGCAATTCTGCCACAAAATCATTCG
GCTATTCTGCCAACCATTCAAGAAATTCGTGTCGAGGCAAAGTCCTTGCC
GTTCAGTGACCTCAGGTCTCGTGTTGAGGATATTCGTGGCCGTGTTCAGG
AATCTCCTGCTGTCACTAGCGCAGATGCTGTGATTATGCACGTCTATCAT
ACGCGGACCGCCAAATGTCTGCGTGGGCGTTGCAATTTTCTTTCGTTTCG
AGGCGCTACAAATTCATGCACAAAACATTCGGAGTTGTGCGCGTGTCGGA
GTAGTCTCTGATGTACAGTCCAAGGTCATGCGGACATATCACATTCTGAA
ATTGCGTCGTGTACGGTTGAAAGCAGCGGTAAACCAGGAAACTGCAAAGG
TGACTAGACCGAACTCGCGCAGCGGGAAACTAGCGAGCAAAGCAGACGAT
TCGAGCCGGGCTCAACCTAAATCGAGCACCCGTGAAACAAGAAGCACTCG
GGCCCAACCTAAACCAAGCACCCGTCGGTGTAGCAAAAAAGCGAAAACTG
TTGACGAACTCAAGGCAGAGATAGTACCGCGGACGACCAGGCCAAGGGCC
GCTGCTGCGGCCAGACAAACAGACGCGAAACCCAATAGCGATCCTTCGGC
TCAGTCAAAAACACGCAGACGTGTCGGGGATGCCGAAAAGGAAGATCATA
CTAAGCAGCAGGGTAACGACGATGGAAGTAATAGTCATCAGGATGAACCG
CGGCCAATTATAGGTGCCGATCAAGTAGCGC back to topprotein sequence of EsuBft151_23a-0001 >EsuBft151_23 ID=EsuBft151_23|Name=EsuBft151_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=209bp
MASRNIFAATPPSSKRKTAEVLGKCARCDNAEVTRCSATFGGCENYNSSG
CRYKISILSAAARCVTCLADVNPGVLCLGVPNLKGTKNTRGKTAYVNTHL
RWEDCLGQKVKLGKEGKSAFKFIERVDQEDSRIGVPCARCTDEIVEGDFV
ISTYQPDAENPLPANNPLHAKGCARAVFDDNHEQFVDNMMLEGISSDKVV
SADSIDFDF back to topmRNA from alignment at Scaffold_392:332752..334819+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_23a-0001 ID=EsuBft151_23a-0001|Name=EsuBft151_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2068bp|location=Sequence derived from alignment at Scaffold_392:332752..334819+ (Ectocarpus subulatus male Bft15b)
ATGGCTTCTCGCAACATTTTTGCTGCCACCCCGCCTAGCTCCAAACGCAA
AACAGCCGAAGTGCTCGGGAAGTGTGCGCGGTGTGACAACGCCGAAGTCA
CGCGCTGCTCCGCGACTTTCGGCGGCTGCGAAAACTACAACTCCTCCGGC
TGCAGGTACAAGATCAGCATCCTCTCGGCTGCAGCGCGCTGCGTTACCTG
CCTCGCGGACGTCAACCCCGGCGTCCTTTGCTTGGGCGTGCCCAATCTCA
AGGGGACGAAGAACACCCGCGGCAAGACGGGTAGGTCGCATCTCTGTTTT
GGTCTGTTAAGCTTTTTTGCACGTTTTCGTTTTCTCTGTGTTGCATTGCC
TTTGTCTCCTCCGGCCATGTCTGCGATCCTCGATCTATCTATGTAGATCC
ACCTCCTGCACATGCAGTTCTTCCCGCTCCGTGTCATATCTGTGATTGAT
TGCTCGTGTCGTTCCCTGTCATTTCTGTGATTGCTCGTGTCGCTCATTTT
TTCTCTCATTCGGGTCTCCTCGAATATTATCGTTTGTGCGTCCATCGTTA
TCTCAGCGTACGTCAACACGCATTTTTTCTCTCATTCGGGTCTCCTCGAA
TGTTATCGTTGTGCGTGCGCCATCGTTATCTCAGCGTACGTCAACACACA
CCTACGCTGGGAGGACTGTCTCGGGCAGAAGGTGAAACTAGGCAAGGAGG
GAAAGTCCGCCTTCAAGTTCATCGAGCGGGTCGATCAAGAGGACAGCAGG
ATCGGGGTGAGTCCCGGGTGTTCCGTGTCGTATGTTTTCGTGGTCAGCGC
TGCTTCTCACTTTGTGGCCACAGCTTTGGCCGGAAGAACATTTGCGCACC
ACCTGCATTTTTTTCTCGATTTGTGGCGCTGCTGTGTCCGACTACGTTCC
ATTCTTATTCTTCATTAATTTTCTTTGTGGACGCAAGCAGAGTAATACGT
TTTCTTTTAATTACTTTATTCCGGTGTGGACGGAAGCAGGTCCCGTGCGC
CCGCTGCACGGACGAGATCGTCGAGGGAGACTTCGTCATCTCCACGTACC
AGCCCGACGCTGAGAACCCTCTCCCGGCGAACAACCCCCTCCACGCCAAG
GGCTGCGCGCGTGCCGTCTTCGACGACAACCACGAGCAGTTCGTGGACAA
CATGATGCTGGAGGGTATCTCCTCCGACAAGGTCGTCAGCGCGGACAGCA
TCGACTTCGACTTCTGAAGTGAGTGCTGTGAGGTCTAAATTTGGGCTTCT
GTTCGGCACATGCCTCGGTCGGCTTTTGCGCCGCCAAATCATTCGGCTTT
CACGCCACGTTCGGCAATTCTGCCACAAAATCATTCGGCTATTCTGCCAA
CCATTCAAGAAATTCGTGTCGAGGCAAAGTCCTTGCCGTTCAGTGACCTC
AGGTCTCGTGTTGAGGATATTCGTGGCCGTGTTCAGGAATCTCCTGCTGT
CACTAGCGCAGATGCTGTGATTATGCACGTCTATCATACGCGGACCGCCA
AATGTCTGCGTGGGCGTTGCAATTTTCTTTCGTTTCGAGGCGCTACAAAT
TCATGCACAAAACATTCGGAGTTGTGCGCGTGTCGGAGTAGTCTCTGATG
TACAGTCCAAGGTCATGCGGACATATCACATTCTGAAATTGCGTCGTGTA
CGGTTGAAAGCAGCGGTAAACCAGGAAACTGCAAAGGTGACTAGACCGAA
CTCGCGCAGCGGGAAACTAGCGAGCAAAGCAGACGATTCGAGCCGGGCTC
AACCTAAATCGAGCACCCGTGAAACAAGAAGCACTCGGGCCCAACCTAAA
CCAAGCACCCGTCGGTGTAGCAAAAAAGCGAAAACTGTTGACGAACTCAA
GGCAGAGATAGTACCGCGGACGACCAGGCCAAGGGCCGCTGCTGCGGCCA
GACAAACAGACGCGAAACCCAATAGCGATCCTTCGGCTCAGTCAAAAACA
CGCAGACGTGTCGGGGATGCCGAAAAGGAAGATCATACTAAGCAGCAGGG
TAACGACGATGGAAGTAATAGTCATCAGGATGAACCGCGGCCAATTATAG
GTGCCGATCAAGTAGCGC back to topCoding sequence (CDS) from alignment at Scaffold_392:332752..334819+ >EsuBft151_23a-0001 ID=EsuBft151_23a-0001|Name=EsuBft151_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=630bp|location=Sequence derived from alignment at Scaffold_392:332752..334819+ (Ectocarpus subulatus male Bft15b)
ATGGCTTCTCGCAACATTTTTGCTGCCACCCCGCCTAGCTCCAAACGCAA
AACAGCCGAAGTGCTCGGGAAGTGTGCGCGGTGTGACAACGCCGAAGTCA
CGCGCTGCTCCGCGACTTTCGGCGGCTGCGAAAACTACAACTCCTCCGGC
TGCAGGTACAAGATCAGCATCCTCTCGGCTGCAGCGCGCTGCGTTACCTG
CCTCGCGGACGTCAACCCCGGCGTCCTTTGCTTGGGCGTGCCCAATCTCA
AGGGGACGAAGAACACCCGCGGCAAGACGGCGTACGTCAACACACACCTA
CGCTGGGAGGACTGTCTCGGGCAGAAGGTGAAACTAGGCAAGGAGGGAAA
GTCCGCCTTCAAGTTCATCGAGCGGGTCGATCAAGAGGACAGCAGGATCG
GGGTCCCGTGCGCCCGCTGCACGGACGAGATCGTCGAGGGAGACTTCGTC
ATCTCCACGTACCAGCCCGACGCTGAGAACCCTCTCCCGGCGAACAACCC
CCTCCACGCCAAGGGCTGCGCGCGTGCCGTCTTCGACGACAACCACGAGC
AGTTCGTGGACAACATGATGCTGGAGGGTATCTCCTCCGACAAGGTCGTC
AGCGCGGACAGCATCGACTTCGACTTCTGA back to top
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