Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 400682.PAC_15700370 |
| ProteomeId | EsuBft151_19 |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | PTHR19303 |
| Protein domains | IPR007889 |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | IPR009057 |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SignalP-noTM |
| Protein domains | Coil |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | IPR004875 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 33208|Metazoa |
| Length | 286 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 1.55e-40 |
| EggNOG OGs | KOG3105@1|root,KOG3105@2759|Eukaryota,38DQS@33154|Opisthokonta,3BGR7@33208|Metazoa |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Tigger transposable element-derived protein 6-like |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_19a-0001 ID=EsuBft151_19a-0001|Name=EsuBft151_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2867bp|location=Sequence derived from alignment at Scaffold_392:293170..296712+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTTCCGTTAGCTTTCGTTTGAGCACCTCCGCGTGTCGATCGGGTCAAGCA
CTCCCGAGATACAGCACAGCCCTCACCCACACCCCTTATGTGGGGCATCT
TTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACGTAAGAGAGTAGAC
CCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCAGCGGTGAGATGTC
GCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTAGCCTCGCTGCACG
ACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGTTGGTCCCGGGACT
GTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACGTCTTGATCTACGC
CTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTGAGAGACGCTGTGC
GCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGACCCAGACAAGGGC
CCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGACACCCGGGTTTGTC
GGAGCGAGCCACCCACATCTACGAAGCAAACCGGATTAACGAAGACGGCG
AGCCTCGCCTTCAAGCTTTCTACAAAGCATGGGCGGAGTACCTGGAGGAG
ACCAAGCTCCCGCCGGAACGCATCCTCAACACGGATGAGACAAGTTCGAC
CCCTCAAGGTACAAAGTCGGGGAAGGCAATCGTCGCAAGAGGCACCAAGG
TACCCGGCGCGAGGCGTTCCAATTCGCGAGAAAATACGACGGTGGTCGCC
ACCATCGGTGCCGACGGCCACACGTTCCACCCTACCATCATCTTCAAAGG
CCAGCGTATGCAACCCGCTTGGATCCAGGACAACAACGGCGTCCCCGATG
CGAAGTACACCGTCACGGAGTCATCCTTCATCCAGAGCCACGTCTTCCTG
GACTACCTTCGAGACCTCCGCAAGCAGCTCGATGCGCGCGGCTTGCTGGG
CAAAGCTGCCCTTGTGCTCGACGGCCACGCCTCACACACGACCTTCGACG
CCATCAGCTTGGGCATCTCCCTGGACATGGACCTATTCCAGCTTCCATCC
CACACATCGCACATCACCCAGCCCTTGGACGTCGGTACGTTCGGAACCTT
CAAGATGGAGATCACCAAGGTGCTCACGGCCTACCCGCTAAAGAACGGGG
GGAGGAGTCCGGTGAAGCGCGACATGGCTGGCGTGATTGCGGAGGCATGG
GCAGGGAGCTTCACGCCTGAGAACAACAAGGCGGCGTTCAAAGGGTCGGG
CTTGTGGCCGGTGAGCATGGAGAAAGCTATCAACAGACTACACAGCAAGA
GGAAGCAACGGGACCATGACCGCCCTATTCGTGAAGACCTCGCCGTGGTT
GCCTCTAAGGATCAACTCGAGCGAGACCTCGGCCGCGCTGCCCTCCTGGA
GCTGAAAAGACACGGGCTGATGATCGAGGGGCTCCGTGTCAACACCGTGT
TCCTTGGCGGGCTCACCCGCCTCACCAAGCGCACCAAGGCTTTCGCGACC
GTTCGGGCGGGGGGGGGGAAGCCCGAAGGTGGTCTGCTGTCCGCCGAAGA
ACATCTTGCTCAGGCCAAGAAGGACCAAGAAGCGAAGCAGGCAGCTGAGG
AAGCAAAGGCGGCACGCGCGGAGGCAAGGGCAACGAAGGAGGCCAACCAA
CAATCTGGAGCAGTTGGTGGGCGGGGCGGCGGGCAGGGCGGCGGGCGGGG
CGGCGGGCGGGGCGGCGGGCGGGGCGGCGGGCGAGAGGGGGGGAGAGGTG
GAGGGCGCGAGGGTGGGAGAGGTGGAGGGCGGAGCGGGGGGCGTGGCGAA
GGACGGGGCGGGGAACAGGACGGAGGGCGGGGAGAGAGGAGCGTGAGGGT
TGAGCTAAGCGGGACGCGGACGGCGATCAGGGGGCGCGGTGGCGGTGGGC
GAGAGGGGCGTGGCAGAGGACAGGGTGGCCAGGACCGCACCACTGGTGCT
CGTGGAGAGCAAATGGGGGCGGGAGGGCGGGGGGGGGACGAGGGGAGAGG
TGCTCCCGTCCAAGGAGGAGCGGGACGGCCGAGAGGGGCGGCGGTTCCCT
TGGTTCACCCGCCGCCGTCGGCGGCTCCCATTTCTTCCCGAGGACGGCAG
CGGATCCCGACACCAATCGTTGATGTTTAGACCAGGGCAGATGCTTTGCG
GTTGTTGTTGTTTTTCTGGGCTACTATTGTCTAGGCGGTGGATGAATTAG
ACTATACGAGTAAAGCAGAAGATTAGGTGGTTTGTGGGGGCATGTGGAGA
TGGTTAGGGTGCACCCCAGCAGCGCGGGGGGGGCGGGGGGGTTGATACCG
GGAAACCCGGGGATATGGTAATTTTGTCCCCGGGCATGCATGATTTTTTT
TTTTTTTTTCAACAGCGTTTCTTGTGATAAAACAAACCTACACACCAAAG
GGCGTCTTGTGGGAATGTAAGATGACTGTGAAAAAAGGGAAATGGCCTTG
GGGTTCTTGCGGAGAATTATAGCGGTAGCGGCCGGGTCAAGGGGTGCCTG
TTTGAACGGGCATTACATCACATGCGCGAAGTTTTTCGTCCTAATTTTTT
TTCTTTGAGTCTGTATATGATCAGATTAGACCCACTGTGCAATAATCTCT
TAGTTTTGGCTCTTTTCATGTGTGCAGCACCGCCGTACGGTCAAAAATGG
GGTAAAATCCGTCCCCGATTTCAGGCGGAAAACCCGGGGATGTGAGGATT
TTGTCCCCGGGCGTGGATCGATTGCATTTTTTTTTTCCTAAACGGATATA
TGTTGCGACAGACGTATCTCCACAAAAAATCAGATCATGAAACGCTTCAG
AACGCACGAAAGCAGCTACAAAGCTAAAGTGTTCGTTAATTGGGGGGGGG
GGGTGTTTTCCTGCATT back to topprotein sequence of EsuBft151_19a-0001 >EsuBft151_19 ID=EsuBft151_19|Name=EsuBft151_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=680bp
MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPL
ASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRREL
RDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRI
NEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTKSGKAIVA
RGTKVPGARRSNSRENTTVVATIGADGHTFHPTIIFKGQRMQPAWIQDNN
GVPDAKYTVTESSFIQSHVFLDYLRDLRKQLDARGLLGKAALVLDGHASH
TTFDAISLGISLDMDLFQLPSHTSHITQPLDVGTFGTFKMEITKVLTAYP
LKNGGRSPVKRDMAGVIAEAWAGSFTPENNKAAFKGSGLWPVSMEKAINR
LHSKRKQRDHDRPIREDLAVVASKDQLERDLGRAALLELKRHGLMIEGLR
VNTVFLGGLTRLTKRTKAFATVRAGGGKPEGGLLSAEEHLAQAKKDQEAK
QAAEEAKAARAEARATKEANQQSGAVGGRGGGQGGGRGGGRGGGRGGGRE
GGRGGGREGGRGGGRSGGRGEGRGGEQDGGRGERSVRVELSGTRTAIRGR
GGGGREGRGRGQGGQDRTTGARGEQMGAGGRGGDEGRGAPVQGGAGRPRG
AAVPLVHPPPSAAPISSRGRQRIPTPIVDV back to topmRNA from alignment at Scaffold_392:293170..296712+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_19a-0001 ID=EsuBft151_19a-0001|Name=EsuBft151_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3543bp|location=Sequence derived from alignment at Scaffold_392:293170..296712+ (Ectocarpus subulatus male Bft15b)
TTTCCGTTAGCTTTCGTTTGAGCACCTCCGCGTGTCGATCGGGTCAAGCA
CTCCCGAGATACAGCACAGCCCTCACCCACACCCCTTATGTGGGGCATCT
TTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACGTAAGAGAGTAGAC
CCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCAGCGGTGAGATGTC
GCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTAGCCTCGCTGCACG
ACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGTTGGTCCCGGGACT
GTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACGTCTTGATCTACGC
CTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTGAGAGACGCTGTGC
GCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGACCCAGACAAGGGC
CCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGACACCCGGGTTTGTC
GGAGCGAGCCACCCACATCTACGAAGCAAACCGGATTAACGAAGACGGCG
AGCCTCGCCTTCAAGCTTTCTACAAAGCATGGGCGGAGTACCTGGAGGAG
ACCAAGCTCCCGCCGGAACGCATCCTCAACACGGATGAGACAAGTGAGTT
AGGGCAAGGGTTGAGGTGTCAGTAGGTGTCATTGGGTGTCAGCGGTGTCA
GTATCGACTGCTGTGGGTTCGTAGGCGAAGTACCAGCAGCACTGCGATGT
GTCACAACAACGCGGAGTTCTGCTGCTGCAAAAAAAAAAGATCCAGCAGT
TGTCCCGCATATCTTCCGAGCCGTTGCTGCTTGTCATGCGCGTAGCACAC
AACACGCCCGCATGTTTGCTGCTGGAGTCGGCTGAGGTTAGCATGTAACA
GTCCCTGTGGTCATCTCAGTTGCACTCTGCCGCATGATTGCATGTGTACA
TCGTTTTCTGTTGTGATGCTACCGGCAACAGCGGGCGTGTGTTCTTGGTC
TGCAAAATGCATGTGTGTTGCTGAACGACGCGCGAAGTGCAGACTAGTCT
AGTCACGTCGAGACTTCAGTAGAACGCTTTGTTTTTGTAAACCCACCTAC
GTTTGGAGCTCAATGCAAACTGCCATGGGTGTGGGGTTATTGTTTCGCAC
CCAAAGTTTAAACGAATCCGACACTTGCCGCACAAAAAATGGCCTTCACC
ACTGCTGTGTGCCACCACCCGGAGCGAGCAGCACCCATGTGTGTTTGTAC
GCGCGTTTTTTGTGTGTCTAGTTTACTGATTGTTCAACTGTCTTTACCCC
CGATGCGCGCGTGTTGTAGGTTCGACCCCTCAAGGTACAAAGTCGGGGAA
GGCAATCGTCGCAAGAGGCACCAAGGTACCCGGCGCGAGGCGTTCCAATT
CGCGAGAAAATACGACGGTGGTCGCCACCATCGGTGCCGACGGCCACACG
TTCCACCCTACCATCATCTTCAAAGGCCAGCGTATGCAACCCGCTTGGAT
CCAGGACAACAACGGCGTCCCCGATGCGAAGTACACCGTCACGGAGTCAT
CCTTCATCCAGAGCCACGTCTTCCTGGACTACCTTCGAGACCTCCGCAAG
CAGCTCGATGCGCGCGGCTTGCTGGGCAAAGCTGCCCTTGTGCTCGACGG
CCACGCCTCACACACGACCTTCGACGCCATCAGCTTGGGCATCTCCCTGG
ACATGGACCTATTCCAGCTTCCATCCCACACATCGCACATCACCCAGCCC
TTGGACGTCGGTACGTTCGGAACCTTCAAGATGGAGATCACCAAGGTGCT
CACGGCCTACCCGCTAAAGAACGGGGGGAGGAGTCCGGTGAAGCGCGACA
TGGCTGGCGTGATTGCGGAGGCATGGGCAGGGAGCTTCACGCCTGAGAAC
AACAAGGCGGCGTTCAAAGGGTCGGGCTTGTGGCCGGTGAGCATGGAGAA
AGCTATCAACAGACTACACAGCAAGAGGAAGCAACGGGACCATGACCGCC
CTATTCGTGAAGACCTCGCCGTGGTTGCCTCTAAGGATCAACTCGAGCGA
GACCTCGGCCGCGCTGCCCTCCTGGAGCTGAAAAGACACGGGCTGATGAT
CGAGGGGCTCCGTGTCAACACCGTGTTCCTTGGCGGGCTCACCCGCCTCA
CCAAGCGCACCAAGGCTTTCGCGACCGTTCGGGCGGGGGGGGGGAAGCCC
GAAGGTGGTCTGCTGTCCGCCGAAGAACATCTTGCTCAGGCCAAGAAGGA
CCAAGAAGCGAAGCAGGCAGCTGAGGAAGCAAAGGCGGCACGCGCGGAGG
CAAGGGCAACGAAGGAGGCCAACCAACAATCTGGAGCAGTTGGTGGGCGG
GGCGGCGGGCAGGGCGGCGGGCGGGGCGGCGGGCGGGGCGGCGGGCGGGG
CGGCGGGCGAGAGGGGGGGAGAGGTGGAGGGCGCGAGGGTGGGAGAGGTG
GAGGGCGGAGCGGGGGGCGTGGCGAAGGACGGGGCGGGGAACAGGACGGA
GGGCGGGGAGAGAGGAGCGTGAGGGTTGAGCTAAGCGGGACGCGGACGGC
GATCAGGGGGCGCGGTGGCGGTGGGCGAGAGGGGCGTGGCAGAGGACAGG
GTGGCCAGGACCGCACCACTGGTGCTCGTGGAGAGCAAATGGGGGCGGGA
GGGCGGGGGGGGGACGAGGGGAGAGGTGCTCCCGTCCAAGGAGGAGCGGG
ACGGCCGAGAGGGGCGGCGGTTCCCTTGGTTCACCCGCCGCCGTCGGCGG
CTCCCATTTCTTCCCGAGGACGGCAGCGGATCCCGACACCAATCGTTGAT
GTTTAGACCAGGGCAGATGCTTTGCGGTTGTTGTTGTTTTTCTGGGCTAC
TATTGTCTAGGCGGTGGATGAATTAGACTATACGAGTAAAGCAGAAGATT
AGGTGGTTTGTGGGGGCATGTGGAGATGGTTAGGGTGCACCCCAGCAGCG
CGGGGGGGGCGGGGGGGTTGATACCGGGAAACCCGGGGATATGGTAATTT
TGTCCCCGGGCATGCATGATTTTTTTTTTTTTTTTCAACAGCGTTTCTTG
TGATAAAACAAACCTACACACCAAAGGGCGTCTTGTGGGAATGTAAGATG
ACTGTGAAAAAAGGGAAATGGCCTTGGGGTTCTTGCGGAGAATTATAGCG
GTAGCGGCCGGGTCAAGGGGTGCCTGTTTGAACGGGCATTACATCACATG
CGCGAAGTTTTTCGTCCTAATTTTTTTTCTTTGAGTCTGTATATGATCAG
ATTAGACCCACTGTGCAATAATCTCTTAGTTTTGGCTCTTTTCATGTGTG
CAGCACCGCCGTACGGTCAAAAATGGGGTAAAATCCGTCCCCGATTTCAG
GCGGAAAACCCGGGGATGTGAGGATTTTGTCCCCGGGCGTGGATCGATTG
CATTTTTTTTTTCCTAAACGGATATATGTTGCGACAGACGTATCTCCACA
AAAAATCAGATCATGAAACGCTTCAGAACGCACGAAAGCAGCTACAAAGC
TAAAGTGTTCGTTAATTGGGGGGGGGGGGTGTTTTCCTGCATT back to topCoding sequence (CDS) from alignment at Scaffold_392:293170..296712+ >EsuBft151_19a-0001 ID=EsuBft151_19a-0001|Name=EsuBft151_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2043bp|location=Sequence derived from alignment at Scaffold_392:293170..296712+ (Ectocarpus subulatus male Bft15b)
ATGTGGGGCATCTTTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACG
TAAGAGAGTAGACCCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCA
GCGGTGAGATGTCGCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTA
GCCTCGCTGCACGACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGT
TGGTCCCGGGACTGTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACG
TCTTGATCTACGCCTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTG
AGAGACGCTGTGCGCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGA
CCCAGACAAGGGCCCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGAC
ACCCGGGTTTGTCGGAGCGAGCCACCCACATCTACGAAGCAAACCGGATT
AACGAAGACGGCGAGCCTCGCCTTCAAGCTTTCTACAAAGCATGGGCGGA
GTACCTGGAGGAGACCAAGCTCCCGCCGGAACGCATCCTCAACACGGATG
AGACAAGTTCGACCCCTCAAGGTACAAAGTCGGGGAAGGCAATCGTCGCA
AGAGGCACCAAGGTACCCGGCGCGAGGCGTTCCAATTCGCGAGAAAATAC
GACGGTGGTCGCCACCATCGGTGCCGACGGCCACACGTTCCACCCTACCA
TCATCTTCAAAGGCCAGCGTATGCAACCCGCTTGGATCCAGGACAACAAC
GGCGTCCCCGATGCGAAGTACACCGTCACGGAGTCATCCTTCATCCAGAG
CCACGTCTTCCTGGACTACCTTCGAGACCTCCGCAAGCAGCTCGATGCGC
GCGGCTTGCTGGGCAAAGCTGCCCTTGTGCTCGACGGCCACGCCTCACAC
ACGACCTTCGACGCCATCAGCTTGGGCATCTCCCTGGACATGGACCTATT
CCAGCTTCCATCCCACACATCGCACATCACCCAGCCCTTGGACGTCGGTA
CGTTCGGAACCTTCAAGATGGAGATCACCAAGGTGCTCACGGCCTACCCG
CTAAAGAACGGGGGGAGGAGTCCGGTGAAGCGCGACATGGCTGGCGTGAT
TGCGGAGGCATGGGCAGGGAGCTTCACGCCTGAGAACAACAAGGCGGCGT
TCAAAGGGTCGGGCTTGTGGCCGGTGAGCATGGAGAAAGCTATCAACAGA
CTACACAGCAAGAGGAAGCAACGGGACCATGACCGCCCTATTCGTGAAGA
CCTCGCCGTGGTTGCCTCTAAGGATCAACTCGAGCGAGACCTCGGCCGCG
CTGCCCTCCTGGAGCTGAAAAGACACGGGCTGATGATCGAGGGGCTCCGT
GTCAACACCGTGTTCCTTGGCGGGCTCACCCGCCTCACCAAGCGCACCAA
GGCTTTCGCGACCGTTCGGGCGGGGGGGGGGAAGCCCGAAGGTGGTCTGC
TGTCCGCCGAAGAACATCTTGCTCAGGCCAAGAAGGACCAAGAAGCGAAG
CAGGCAGCTGAGGAAGCAAAGGCGGCACGCGCGGAGGCAAGGGCAACGAA
GGAGGCCAACCAACAATCTGGAGCAGTTGGTGGGCGGGGCGGCGGGCAGG
GCGGCGGGCGGGGCGGCGGGCGGGGCGGCGGGCGGGGCGGCGGGCGAGAG
GGGGGGAGAGGTGGAGGGCGCGAGGGTGGGAGAGGTGGAGGGCGGAGCGG
GGGGCGTGGCGAAGGACGGGGCGGGGAACAGGACGGAGGGCGGGGAGAGA
GGAGCGTGAGGGTTGAGCTAAGCGGGACGCGGACGGCGATCAGGGGGCGC
GGTGGCGGTGGGCGAGAGGGGCGTGGCAGAGGACAGGGTGGCCAGGACCG
CACCACTGGTGCTCGTGGAGAGCAAATGGGGGCGGGAGGGCGGGGGGGGG
ACGAGGGGAGAGGTGCTCCCGTCCAAGGAGGAGCGGGACGGCCGAGAGGG
GCGGCGGTTCCCTTGGTTCACCCGCCGCCGTCGGCGGCTCCCATTTCTTC
CCGAGGACGGCAGCGGATCCCGACACCAATCGTTGATGTTTAG back to top
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