Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft151_18 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 78 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-12_004740.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_18a-0001 ID=EsuBft151_18a-0001|Name=EsuBft151_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=786bp|location=Sequence derived from alignment at Scaffold_392:290701..291527+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGCAAGCAGAGGAGAAGATCGAAAATAGCTGCAATGGTGAGGATGG
CCCGCGAGACAGTTACAGCAGCCAACAAAGCGGGGCTCAACAGGGTGGCG
ACGAGTTAGGCCATCAGCTCGCCGGATCGGCTTCCTCGTGGAGGGGTTCG
GACGAGGAGATCATCGGTGGAAAATCGAGCGAGAACATCGAAGCAGCAGC
AGCAACTAACGCGGAAAGGGAAGGGATCGTGAGGGCAGGAACATCCTCAA
ACAGTTCTGATGCTGGACGATGGTCTGATGCCGTTGAGACCACGAGCGGT
GATAATGGTGCAACGAAAGCTAGCATCACCGTCGGTCACAACAGCAGCAG
TGGCATCAGCATAGGAGAGGAGGAAGAACTGGAACAAGAACAAGAAGAGC
AAGTGATTGCTAGAAAAGCAGACGTTGAGCTGTCCCCAGCCGCATCGAAC
AGCGGCAGGAGTGGCGACCCTCGCAGTGATGGGGTAGAACCAGGAGCAGA
GGTTCCCCGTAGCAGCATTGACGGAAGGGCAACGGCGCCTCCACTACAAG
TGGATGGGGACATCACCAACAACAACAACACCAGCGATACTTACTCTTCT
TCCTCTCAAGCCATCATCGAAGATGGCCTCGATCGGGGTGAATCAGCTGG
CGAGGCAGACACAGATAGGCTTCTTTTCGATGGAGACGGGGAGGAGGAGA
ACGAGAAGCTGGGAGGTGAAAATGACGCTGCACCTAGCGAGTACGGAGAT
GACTTCGACGACGATTTCGACGACGAGGAAGGTTAA back to topprotein sequence of EsuBft151_18a-0001 >EsuBft151_18 ID=EsuBft151_18|Name=EsuBft151_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=261bp
MKQAEEKIENSCNGEDGPRDSYSSQQSGAQQGGDELGHQLAGSASSWRGS
DEEIIGGKSSENIEAAAATNAEREGIVRAGTSSNSSDAGRWSDAVETTSG
DNGATKASITVGHNSSSGISIGEEEELEQEQEEQVIARKADVELSPAASN
SGRSGDPRSDGVEPGAEVPRSSIDGRATAPPLQVDGDITNNNNTSDTYSS
SSQAIIEDGLDRGESAGEADTDRLLFDGDGEEENEKLGGENDAAPSEYGD
DFDDDFDDEEG back to topmRNA from alignment at Scaffold_392:290701..291527+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_18a-0001 ID=EsuBft151_18a-0001|Name=EsuBft151_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=827bp|location=Sequence derived from alignment at Scaffold_392:290701..291527+ (Ectocarpus subulatus male Bft15b)
ATGAAGGTGAAGACGACACCAGCCTAACCACAAAACGTCATCATCAGCAA
GCAGAGGAGAAGATCGAAAATAGCTGCAATGGTGAGGATGGCCCGCGAGA
CAGTTACAGCAGCCAACAAAGCGGGGCTCAACAGGGTGGCGACGAGTTAG
GCCATCAGCTCGCCGGATCGGCTTCCTCGTGGAGGGGTTCGGACGAGGAG
ATCATCGGTGGAAAATCGAGCGAGAACATCGAAGCAGCAGCAGCAACTAA
CGCGGAAAGGGAAGGGATCGTGAGGGCAGGAACATCCTCAAACAGTTCTG
ATGCTGGACGATGGTCTGATGCCGTTGAGACCACGAGCGGTGATAATGGT
GCAACGAAAGCTAGCATCACCGTCGGTCACAACAGCAGCAGTGGCATCAG
CATAGGAGAGGAGGAAGAACTGGAACAAGAACAAGAAGAGCAAGTGATTG
CTAGAAAAGCAGACGTTGAGCTGTCCCCAGCCGCATCGAACAGCGGCAGG
AGTGGCGACCCTCGCAGTGATGGGGTAGAACCAGGAGCAGAGGTTCCCCG
TAGCAGCATTGACGGAAGGGCAACGGCGCCTCCACTACAAGTGGATGGGG
ACATCACCAACAACAACAACACCAGCGATACTTACTCTTCTTCCTCTCAA
GCCATCATCGAAGATGGCCTCGATCGGGGTGAATCAGCTGGCGAGGCAGA
CACAGATAGGCTTCTTTTCGATGGAGACGGGGAGGAGGAGAACGAGAAGC
TGGGAGGTGAAAATGACGCTGCACCTAGCGAGTACGGAGATGACTTCGAC
GACGATTTCGACGACGAGGAAGGTTAA back to topCoding sequence (CDS) from alignment at Scaffold_392:290701..291527+ >EsuBft151_18a-0001 ID=EsuBft151_18a-0001|Name=EsuBft151_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=786bp|location=Sequence derived from alignment at Scaffold_392:290701..291527+ (Ectocarpus subulatus male Bft15b)
ATGAAGCAAGCAGAGGAGAAGATCGAAAATAGCTGCAATGGTGAGGATGG
CCCGCGAGACAGTTACAGCAGCCAACAAAGCGGGGCTCAACAGGGTGGCG
ACGAGTTAGGCCATCAGCTCGCCGGATCGGCTTCCTCGTGGAGGGGTTCG
GACGAGGAGATCATCGGTGGAAAATCGAGCGAGAACATCGAAGCAGCAGC
AGCAACTAACGCGGAAAGGGAAGGGATCGTGAGGGCAGGAACATCCTCAA
ACAGTTCTGATGCTGGACGATGGTCTGATGCCGTTGAGACCACGAGCGGT
GATAATGGTGCAACGAAAGCTAGCATCACCGTCGGTCACAACAGCAGCAG
TGGCATCAGCATAGGAGAGGAGGAAGAACTGGAACAAGAACAAGAAGAGC
AAGTGATTGCTAGAAAAGCAGACGTTGAGCTGTCCCCAGCCGCATCGAAC
AGCGGCAGGAGTGGCGACCCTCGCAGTGATGGGGTAGAACCAGGAGCAGA
GGTTCCCCGTAGCAGCATTGACGGAAGGGCAACGGCGCCTCCACTACAAG
TGGATGGGGACATCACCAACAACAACAACACCAGCGATACTTACTCTTCT
TCCTCTCAAGCCATCATCGAAGATGGCCTCGATCGGGGTGAATCAGCTGG
CGAGGCAGACACAGATAGGCTTCTTTTCGATGGAGACGGGGAGGAGGAGA
ACGAGAAGCTGGGAGGTGAAAATGACGCTGCACCTAGCGAGTACGGAGAT
GACTTCGACGACGATTTCGACGACGAGGAAGGTTAA back to top
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