Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1510_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 151 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1510_7a-0001 ID=EsuBft1510_7a-0001|Name=EsuBft1510_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1517bp|location=Sequence derived from alignment at Scaffold_350:59907..63951- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TACCCCACAGAGATTACCCTCTTGTTCTGTATACAATACCCCAACACTTC
TGTGAGTTCTGTGACGGTCATGCCACAAAACCCTACACTTCTGTGAGTTC
TGTAGCACATCCCGTACCCTACAGAGATTACCCTCCGGTTCTGTAACAGA
TCCAATACCCCACAGACATTACCCGTACCCTACAGAACCTAACCTTNTAC
CCTCTTGTTCTGTATACAATACCCCAACACTTCTGTGAGTTCTGTGACGG
TCATGCCACAAAACCCTACACTTCTAGCGAGATCTGTGCACCACGCGGAA
CACATGTTTATAAATCGGCACAGCCCGCATGCAGTTGCATAAGCATGAGA
GGTGGTGCCAATGGTCCAAGCCTAATCCTTCCGCTCAAGCAACGAGCCGT
GTGATAACAAGTCGGTGACAAAGAAGATGGTGACAGCTTGTCAATCCTGT
GCTTTGCCGTTCAGGTGAAACTGGCCGGCACGGTGGGCGTGCGGGTGGAG
GAGCTCACGCCCCACCGATCCGTCGTGAAAGTTGCCAACGTGCGACGAGT
GCAGAACCACCTCGGGAGCGTGCACGCGCGCGGCATGGCTCTCGCCTCGG
AATCAGCCACGGGAATCCTGGTCGGCATGAGCGTGGCCGACAGCCGGTTG
CGCCTGTGCAAGAGCATGGCGATCGATTTCACAAGGCTGTCGCAAGCGAA
GAGCAGCTCGCCGCCGTTCGAGACCAGGAAAAGGGGGAGGCGAATGTACA
GGTGACGGTTACAGATGAATTCGGGAAAGAGCCTATCCGAGCGGAATTCG
TGTGGGCCTGGGTCCCCAAGCGATGGAAAAAAAAATCAGTAGTAAAAAAG
AGCCAGAGGAACGGTTGTGAATAGAAATATGTAGAACAGTCGGTGGAAAC
GGCCACGCTGTGGATACTGAGGATAGCGAGAATGGTATATGGAAACAGCA
ATGAGATTCGTTCTGGGCGTTGCTTTGTTTGCCAGAGGGCGCCCGGGGGG
TGGGGGGTGGGGTGGGGTGGGGGGGTCCCCTTCCTCTGAGCCGCGTGAGG
CAATTGTTTGCTGGAAGTTGGGAACGTTCCTGAGACGGACGGCTTGGGCT
TCTTGTCGTACAGAGTGTCGTTGTTGTTGTTGTTGTTGTTGTCTTTTGGC
CAAAAAAAGCCACTCAGGGCTTACCTCATGTCCGTGCCGACCGGGTGGTC
CAACGTACGCGTGTAAAAGGTGAAGAAACCGGTGATCGTTGTGGCATACC
CTCGTGTTGCTCAAGTACCAGGCTACCGCATGCAGTAGTAGCGCAAACCT
TGCGCATATGGTTGTGTTGTTTTGGAAGTCGGCTGGTAGGTACGAATCAC
GTGTAGAGGTGGACGCCAACGCCGCGGCAGTTGTCATCGACGGCAAGCGT
CTGGGGCACACGGGGCGCAACCCTCGCTGCTACCGCCCTCGGCACCGTCC
CTGCCTTCGCCTCCACTCCTCCCTCTGCCCCCTTGTCTGCCTAGATCTAC
GAATTGGATACTGTCGT back to topprotein sequence of EsuBft1510_7a-0001 >EsuBft1510_7 ID=EsuBft1510_7|Name=EsuBft1510_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=29bp
MPQNPTLLARSVHHAEHMFINRHSPHAVA back to topmRNA from alignment at Scaffold_350:59907..63951- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1510_7a-0001 ID=EsuBft1510_7a-0001|Name=EsuBft1510_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4045bp|location=Sequence derived from alignment at Scaffold_350:59907..63951- (Ectocarpus subulatus male Bft15b)
TACCCCACAGAGATTACCCTCTTGTTCTGTATACAATACCCCAACACTTC
TGTGAGTTCTGTGACGGTCATGCCACAAAACCCTACACTTCTGTGAGTTC
TGTAGCACATCCCGTACCCTACAGAGATTACCCTCCGGTTCTGTAACAGA
TCCAATACCCCACAGACATTACCCGTACCCTACAGAACCTAACCTTNTAC
CCTCTTGTTCTGTATACAATACCCCAACACTTCTGTGAGTTCTGTGACGG
TCATGCCACAAAACCCTACACTTCTGTGAGTTCTGTAGCACATCCCGTAC
CCTACAGAGATTACCCTCCGGTTCTGTAACAGATCCAATACCCCACAGAC
ATTACCCGTACCCTACAGAACCTCACCTTCACTTCATGTTCTCACCTCGT
CATGATCATGATCATGTTTGGTATTGTTGTCTTGAACACAGAGCGAGATC
TGTGCACCACGCGGAACACATGTTTATAAATCGGCACAGCCCGCATGCAG
TTGCATAAGCATGAGAGGTGGTGCCAATGGTCCAAGCCTAATCCTTCCGC
TCAAGCAACGAGCCGTGTGATAACAAGTCGGTGACAAAGAAGATGGTGAC
AGCTTGTCAATCCTGTGCTTTGCCGTTCAGGTGAAACTGGCCGGCACGGT
GGGCGTGCGGGTGGAGGAGCTCACGCCCCACCGATCCGTCGTGAAAGTTG
CCAACGTGCGACGAGTGAGTGGGGCTGAAGTATAGCATTTGTCGTGGAGT
AAATTAAGTAGAGGTCCTTGTGTAGTGCCCGGTATGTGCGCAGAAAAATC
ACCGGCACTACACCGGGCCGGCACTACAGACAGTGTTTAAAATACTCGCA
ATGGGATGGAAATTCAGCGTTTGCCCGCCGAAAACAGCGGCACCTCTTCA
ACCGGCACTGAACACCAACCAGGGATCTCTATGCATAGACAGTACTTCTG
TAGCAGTAGTCTAGTAGTGGGTAGTAGTACAATAGTTGCCGCTGCTGTTG
GTGGGAGTGATAAGTGTAGGTGGTAATGGTCGTGACGTTGCTGCCATGGC
CTGTTGTCGTTGTTGTTGCTGTAGTTGTTGCTGAGGCTTGGTGTGTCACG
CCGGTTCTGCTCGCTGTTGGGAGTGGCCTGTTCTTGCTTGCTGCCACTTC
TGTTGCTCTTCCGAACGAAGCGCATCCATCTCCACATCTATCTATGCTGT
CCAGTCATGGCAACTAACCAGCCATGTCATTAAGCACACTCTCGCGCGTG
AAATACGAGTTTGTTTCCAACCACGATAAAACCCATCGTCTGGCACCAAC
AATGTGTATGTAACTTAATAGTCTAGTCTAGTGATCGCGGTGTTCACAAC
GACGGAATTGTGTTTGGCAATCCCAGACGCAGAACCGCTTCGGGGCTGTC
CAGTCATGGCAACTGAACAGCAATGCACACTCTCGCATGAAATTCGAGTT
ATTAACCACGACAACTAATACAGTTAGCGCCGCCATTTAAGAACCTCTTA
TTTAGGCCGAGGTTCGTTTCTTGCCTTCTCTGGTCTATGGGGTACCCCAA
CGGCGACTACAATATCTAGGTTTTTGCGTGGGCTTTATGACCGAGCCCTG
TTCTTTTGACCAAGTTCTTCAAGTTTTCGTTTCTTGAGCCGCAATTTCGT
AGCTCCCAGGTTCTTATGTGCGGGCGCTATATGTAACTGTATGGCACCAA
CGATCGCGGTGTTCACACCGACGGATGTTTTTTCGTCGATCCCAGATGCA
GAACCGCTTCGGGGCTGTCCAGTCACGGCAACCGAAGAACGACAGCATGA
AGCACACGCATCCTACTCGTGACTAAAATCCATGTGATATGTGATCGTGG
TGATAACTATGTCGGAATCGATTTTGTCGATACCAGCTGCACAACCGCAT
CTGAGCTGTCCTGTCATGTCGATTGAGCAGCTACGACACCCACACGGTCT
CGCGCCAAGAAGATCCAATCTTATCCACTACAAATAATACTCATGAACCA
ACAGGTAGAGCCAACCAAAACAGGGGACCACGAGAGCGAGCGGTGTCTTC
ACCCTCGGAATGTTTTGTTTGTCGATCCCCCAGTAGGCGCAAAACCACAT
CCTTGAGTAGCCCAGTGATGGCAACTGACGAGCGACGACACGTGCTGCCA
TAAAAATATACCAAGTACGACGCAATTTATGCTTTTACTGTACCAACAAA
GTACGGATTACAAGCGCGGTGTCTTGATGTTATCGATCCTGCCCGATAGG
TGCAGAACCACCTCGGGAGCGTGCACGCGCGCGGCATGGCTCTCGCCTCG
GAATCAGCCACGGGAATCCTGGTCGGCATGAGCGTGGCCGACAGCCGGTT
GCGCCTGTGCAAGAGCATGGCGATCGATTTCACAAGGCTGTCGCAAGGTT
TTGTAGACTATGTTTATTATATATGATAGGAAAGGCCGCGCCTTCTTCGG
CGATGTCCTCTATGATGTTGATGCGGTCGAGTTCACAAGGCTGCCGCAAA
TTCGGCTTTTTTTTTAGCAGTGCCATTATCTTCTTTGGGTGTCCTCGTTG
TCGGTGATGCGATCAACTCCACGAGGCTTGCGCACAGCGCGTGTTCTAAT
TAGGCCACCTCTTGCTTGCGATGTCATCTATAACGAAATGTAACACACGT
TTTTGCTACCGGCACCGGGCGACGTAACGGCCGTGGCGGAGCTAAGCGAA
GAGCAGCTCGCCGCCGTTCGAGACCAGGAAAAGGGGGAGGCGAATGTACA
GGTACCGTAGGTTGCGTGGCGTGAGATACCGCACCCTCTGGACTGGCGTT
CCCTTTTTTTTAAGACTGTATGCAGATTTGTGATTTCGTCTCTTTTGGTT
CGATGAGGCTCGCTGAGCTCTTCGAGTCGAAACACGTCAGCTGTGTGACC
TCTTTGAGCTTGGAAACAAACGTCACTGGTGGCAGCTGGCAGGTGATTCA
CACAAACACACGCTTCACCTTCACGCCTTTTATGACACTACACCACCACA
AGTACACTCTGATGACCCCGTTCCGGAGGCACACCTTGAAGGAAATGTTC
AAACGCATAAAACCAAACAAATACTCGAAGAGAGACTGCCCGGTCGAGAT
AAAACCACAGAGATCAAAGGGGGTGGTTTGAAGTATTTTGCAGTGACTGG
GAGAAAAACCGACTGGATACTGGGCTTACATTAAGCCTATTGTTAGCCTC
GCGCTGATTGTTTTGACAGTGATGCCAGCTGGTGCTAAGCGATCAGGCAT
ATTTTGTTCCGTTTTTTGCTCTTTTCCAGGTGACGGTTACAGATGAATTC
GGGAAAGAGCCTATCCGAGCGGAATTCGTGTGGGCCTGGGTCCCCAAGCG
ATGGAAAAAAAAATCAGTAGTAAAAAAGAGCCAGAGGAACGGTTGTGAAT
AGAAATATGTAGAACAGTCGGTGGAAACGGCCACGCTGTGGATACTGAGG
ATAGCGAGAATGGTATATGGAAACAGCAATGAGATTCGTTCTGGGCGTTG
CTTTGTTTGCCAGAGGGCGCCCGGGGGGTGGGGGGTGGGGTGGGGTGGGG
GGGTCCCCTTCCTCTGAGCCGCGTGAGGCAATTGTTTGCTGGAAGTTGGG
AACGTTCCTGAGACGGACGGCTTGGGCTTCTTGTCGTACAGAGTGTCGTT
GTTGTTGTTGTTGTTGTTGTCTTTTGGCCAAAAAAAGCCACTCAGGGCTT
ACCTCATGTCCGTGCCGACCGGGTGGTCCAACGTACGCGTGTAAAAGGTG
AAGAAACCGGTGATCGTTGTGGCATACCCTCGTGTTGCTCAAGTACCAGG
CTACCGCATGCAGTAGTAGCGCAAACCTTGCGCATATGGTTGTGTTGTTT
TGGAAGTCGGCTGGTAGGTACGAATCACGTGTAGAGGTGGACGCCAACGC
CGCGGCAGTTGTCATCGACGGCAAGCGTCTGGGGCACACGGGGCGCAACC
CTCGCTGCTACCGCCCTCGGCACCGTCCCTGCCTTCGCCTCCACTCCTCC
CTCTGCCCCCTTGTCTGCCTAGATCTACGAATTGGATACTGTCGT back to topCoding sequence (CDS) from alignment at Scaffold_350:59907..63951- >EsuBft1510_7a-0001 ID=EsuBft1510_7a-0001|Name=EsuBft1510_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=90bp|location=Sequence derived from alignment at Scaffold_350:59907..63951- (Ectocarpus subulatus male Bft15b)
ATGCCACAAAACCCTACACTTCTAGCGAGATCTGTGCACCACGCGGAACA
CATGTTTATAAATCGGCACAGCCCGCATGCAGTTGCATAA back to top
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