Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G4Z8 |
| ProteomeId | EsuBft1510_6 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 207 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.42e-94 |
| EggNOG OGs | 2CZK4@1|root,2SARG@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1510_6a-0001 ID=EsuBft1510_6a-0001|Name=EsuBft1510_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2070bp|location=Sequence derived from alignment at Scaffold_350:74174..77670- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATCGTTGAGATGTACAACGCCACACTGAAGGTTGTCAACAAGGACTT
GCAGCGACAGCTTGCCCTTGCGATCATCCCGATCTTGTACGCGAACTGTG
ACATTTGGACAACCAAAGTGTCCGGAGAGAAGTTTATCGATTTGTGTTGC
AACTACTTCGCACGTTTCAACGGCGCTCAAACCACCCTTCCCGCGCCAAA
TCTCCCTATGATGGTGCTGAATTTCGTGTCAACTCTCGACGCAGCTGTGC
GCATCTTCTACATCGACTCGAGCGGGTTTCTGAGGACACACTTGTTGGCG
GTGAAGCTTTTCCGGCCGGCTCCGTCGCTCGGGAAGGTCACTGGCAAGGT
GGTGCTGAAGTGGTTCCTGCAGGTGCTGGGCCAGCACGGGATACCGATCG
AGCGCTTGGCCGGCGCCGTGACGGACGGCGGGGGTGACGTCCGGACCGGA
ATCGGCCAGGTAGCTACGCGGGCGTGGTGTGGGCCGCACATGCTCAACCG
CGTCATCATCGACGGCACCGGCATGGCCAACACAGCAAACCAGTCCAAGA
ATCTGTCGTGCCGCGGCTTGATGGAGATCTGCAAGAAGGTCGTCCAACAT
GTCAACAGATCTCAGGGGTTCAAGATCGAACTCGAGGACACGCTCGAGAA
GGCGTCCGACGGCAAGCGTTGGAAGGCGAAGCTCTCACAAGCGGTGTCCC
AGCGCTGGATCAGCCTGTGCAAGATGTTGCTCCGCATCCTAGAGCAATGG
GTCGCCATCGACAAGGTCTACGCCAGCAACCGCGAGAAATTCCCTTTGGG
AGATCTGCGCCGTGAGATGGAGGAAGTTTACAGCATGCTGAGCGAGTTCA
AGGCCGTTATCGAGTACTCCCAGACGACGCACGAGGCCACTGCGCAGAAG
GCGCTGGAGATGACTGTGGATCTTCTCACCTACACCCTCGACCCCGCGGA
GCGTCTCCGAGTGTACCACGTCGTTTCTATCGGAGCGGAGGGCGACACCA
CCAAGTACGACGACATCGAGCACGAAGACCTCACGCCGATTGGCCGCAAC
ACACGTGTCGCGTTGAGGAAAGCACTTGTGGCACGGTTTTTGCCGCGCTA
CGGCCGCGAGCTTGACGCTGGCGGCCACCTCTTTGACCGCACGATGCTTC
TCAGTCCAAACCAGAGGAAGCTGAGGTACGTGGACGCTCTGCGCTCTTCA
GCTGCCAAGGAGGGCGACATGCGGTCCTCTAGCGCCATCAAGGCGAAGAT
CAAGGAGGAGGTGACCGACCTCCTTGTCGCGGCCATCGAAGCGATTAGAG
CAACGGCACCATCGGACGGGGGGGTGGAGAGCAGTGCGGGAGGGGGGCAA
CCGCAGGCCAAGCGGGCTAAAACCACCTCTACCGCAGCGTCCAGCGCCTC
CGGTGACGGAAACGATGACCACCGGCGCCGGCGGCGCCGATTTTTAGACG
ACGACGATGAAGGCAGCGACAGCGACATGGACGCGACTCCGGTGGAGGAA
GACCCCAGGAAGGAAGCGGAGGCCATGATGAAGGAGTGGCTCGCAGCTCA
GATTCCACCAGAAGAGCGGACGGAGAACGGAGCAGAATACTGGCGCCTTC
ACGGCAAGAAACACCCCTTCGCTCTCCGATTGGTCGCGCAGGCGGTGTAC
GGCGTCCCTGCCTCAGCGGGTGTGGTGGAGCGAGATTTTAGCATCGCGGA
CTTGTTCATGCCCCGCAAGCGTGCCTCGCTTGATCCAGCGTACTTGGAGA
TGCAGCTCTACCTGCGAGCGCACTTCGACAGCATCCCCATGGACATCCCC
AAGCTGGACGACGCTTCCGTGGCGGCCGCCATCCCGGACCGTTTCAGGGA
CCCACAGGCCGTCGAAGAGGTGCGGGTGTTGGACTTCACCGAGGAGGAGA
AGGAGGTGGGGGTTTTCGACTTCGTGCCGGATGAGGAGGGGGACTTCGTG
CCGGATGAGGAGGGGGAGGACGCCGAGGGCCCCGAGCCGAACGTGCCCGT
GCCCCCTGTCGGAGAAGTGGGGGGGGGGGTGGCTCCAGCGGCTGGAGACG
GGCAATCCACCACCAACTAG back to topprotein sequence of EsuBft1510_6a-0001 >EsuBft1510_6 ID=EsuBft1510_6|Name=EsuBft1510_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=689bp
MIVEMYNATLKVVNKDLQRQLALAIIPILYANCDIWTTKVSGEKFIDLCC
NYFARFNGAQTTLPAPNLPMMVLNFVSTLDAAVRIFYIDSSGFLRTHLLA
VKLFRPAPSLGKVTGKVVLKWFLQVLGQHGIPIERLAGAVTDGGGDVRTG
IGQVATRAWCGPHMLNRVIIDGTGMANTANQSKNLSCRGLMEICKKVVQH
VNRSQGFKIELEDTLEKASDGKRWKAKLSQAVSQRWISLCKMLLRILEQW
VAIDKVYASNREKFPLGDLRREMEEVYSMLSEFKAVIEYSQTTHEATAQK
ALEMTVDLLTYTLDPAERLRVYHVVSIGAEGDTTKYDDIEHEDLTPIGRN
TRVALRKALVARFLPRYGRELDAGGHLFDRTMLLSPNQRKLRYVDALRSS
AAKEGDMRSSSAIKAKIKEEVTDLLVAAIEAIRATAPSDGGVESSAGGGQ
PQAKRAKTTSTAASSASGDGNDDHRRRRRRFLDDDDEGSDSDMDATPVEE
DPRKEAEAMMKEWLAAQIPPEERTENGAEYWRLHGKKHPFALRLVAQAVY
GVPASAGVVERDFSIADLFMPRKRASLDPAYLEMQLYLRAHFDSIPMDIP
KLDDASVAAAIPDRFRDPQAVEEVRVLDFTEEEKEVGVFDFVPDEEGDFV
PDEEGEDAEGPEPNVPVPPVGEVGGGVAPAAGDGQSTTN back to topmRNA from alignment at Scaffold_350:74174..77670- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1510_6a-0001 ID=EsuBft1510_6a-0001|Name=EsuBft1510_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3497bp|location=Sequence derived from alignment at Scaffold_350:74174..77670- (Ectocarpus subulatus male Bft15b)
ATGATCGTTGAGATGTACAACGCCACACTGAAGGTTGTCAACAAGGACTT
GCAGCGACAGCTTGCCCTTGCGATCATCCCGATCTTGTACGCGAACTGTG
ACATTTGGACAACCAAAGTGTCCGGAGAGAAGTTTATCGGTGAGATATTT
ACAATGTGTTTAGCATGATGTTCTCCGAATGGTTGGTGCTGCCCTGGTAC
ATGGGAAGGATAAAAGCTGCATTTTTTTCACGATTTTTTCAAGACCAACT
AGCTGCAGCGACGTTGTTCTGTAGGACGTGCTGAGTGTGGAATTCATCTG
TATCGAATCACTTACCCCCGCGTTCGGTAGGCGTGTTAGGCAGGATGGGG
GAATTTGTGCCTTCCCTAAATATTTCTTCTAGTCGCCTTTCGGCACGAGG
TGTGTACACAAACCGGACAGAGTCTGCAATAGATTTGTGTTGCAACTACT
TCGCACGTTTCAACGGCGCTCAAACCACCCTTCCCGCGCCAAATCTCCCT
ATGATGGTGCTGAATTTCGTGTCAACTCTCGACGCAGCTGTGCGCATCTT
CTACATCGACTCGAGCGGGTTTCTGAGGACACACTTGTTGGCGGTGAAGC
TTTTCCGGCCGGCTCCGTCGCTCGGGAAGGTCACTGGCAAGGTGGTGCTG
AAGTGGTTCCTGCAGGTGCTGGGCCAGCACGGGATACCGATCGAGCGCTT
GGCCGGCGCCGTGACGGACGGCGGGGGTGACGTCCGGACCGGAATCGGCC
AGGTAGCTACGCGGGCGTGGTGTGGGCCGCACATGCTCAACCGCGTCATC
ATCGACGGCACCGGCATGGCCAACACAGCAAACCAGTCCAAGAATCTGTC
GTGCCGCGGCTTGATGGAGATCTGCAAGAAGGTCGTCCAACATGTCAACA
GATCTCAGGGGTTCAAGGTGAAGCGACTCTCTATTTGTCGGGTTGCACAA
CTCTGCTTGTACTGCTTCAGGGTTATGACTCAGGGTTAGGTAGAAGCCTT
GCGATATTCTTCACTTTCCCTATTCTCATCGGTTCCCTTTCAACCCGCCA
TGCCGAAATACCGATGTGCGTTGTTGGCGATGCCCCGCTTTGAATGGCAG
ATCGAACTCGAGGACACGCTCGAGAAGGCGTCCGACGGCAAGCGTTGGAA
GGCGAAGCTCTCACAAGCGGTGTCCCAGCGCTGGATCAGCCTGTGCAAGA
TGTTGCTCCGCATCCTAGAGCAATGGGTCGCCATCGACAAGGTCTACGCC
AGCAACCGCGAGAAATTCCCTTTGGGAGATCTGCGCCGTGAGGTCAGCAG
GGTCCATGTGTTCGGAGGCTTGGAATTTTTGTTTTTTCTCGTATTGTTTT
TCGGGAAAAGGTGGCCCGGGCTCTTGCTGTGTCCGCTAGAAACCAAGTAC
ACCAGCTTATGTAGGAGGAGATGACTTCGTATCACGCATCAAAGTGTGTT
GCTTTCGAGGTCAATGACTCCCACGTTCCCGCTCACGTGGTATTCAAGCT
GTGTGGTGTGTATGTTGCCCTTTTGGGTTTTGGTAGGCGCGGTGGGGGAG
CGCCCCCGGGAAAAATTATGCTGAAGACGAACGCGAGGCACATGATTCCA
TACCGCTGAAGAATATGCTGTTGCCCTCCTCGTTGCACGGTACGTGCCGC
GTCGCATTTAAAAAGCCACTTTCTCCCCCCGTCTCTATATTTTATCCCTT
CTCAGATGGAGGAAGTTTACAGCATGCTGAGCGAGTTCAAGGCCGTTATC
GAGTACTCCCAGACGACGCACGAGGCCACTGCGCAGAAGGCGCTGGAGAT
GACTGTGGATCTTCTCACCTACACCCTCGACCCCGCGGAGCGTCTCCGAG
TGTACCACGTCGTTTCTATCGGAGCGGAGGGCGACACCACCAAGTACGAC
GACATCGAGCACGAAGACCTCACGCCGATTGGCCGCAACACACGTGTCGC
GTTGAGGAAAGCACTTGTGGCACGGTTTTTGCCGCGCTACGGCCGCGAGC
TTGACGCTGGCGGCCACCTCTTTGACCGCACGATGCTTCTCAGTCCAAAC
CAGAGGAAGCTGAGGTACGTGGACGCTCTGCGCTCTTCAGCTGCCAAGGA
GGGCGACATGCGGTCCTCTAGCGCCATCAAGGCGAAGATCAAGGAGGAGG
TGACCGACCTCCTTGTCGCGGCCATCGAAGCGATTAGAGCAACGGCACCA
TCGGACGGGGGGGTGGAGAGCAGTGCGGGAGGGGGGCAACCGCAGGCCAA
GCGGGCTAAAACCACCTCTACCGCAGCGTCCAGCGCCTCCGGTGACGGAA
ACGATGACCACCGGCGCCGGCGGCGCCGATTTTTAGACGACGACGATGAA
GGCAGCGACAGCGACATGGACGCGACTCCGGTGGAGGAAGACCCCAGGAA
GGAAGCGGAGGCCATGATGAAGGAGTGGCTCGCAGCTCAGGTGACAATTG
CATTTGCGCGTGGGTTGTGGTTGTGCGGTCCGCCTCGGCGACACAGCTTG
TATGCGGAACTACGGTGCCCCAGGTGGCAGTTGTGTGAGGAGTTGGTGAT
AATGATTGAAGCAAGTTCAGACCAGCCCCTCTCACCCACCCGTACGTGGT
GGTGCCCATCGGCTTCATGTAAACACAAACGAAAACAAGCTTTCCACATA
CATGTTCAACAGGCGCGGCCGTGAAACCTTCTGTCTCGGTGCTTCAAAAG
CACTGCTCTCTACGTGTTTTCCATCTTGTGGCTCGGTGAAATAGAAATCA
TATGGTTTGACTTGCACTCAAATACCCGAGTTGAGTGCCTATTTGTTTGT
AAGAAATTCCATCTCTATTTCTCAGGAGGGCATCGACCCTGGTTTGTTCA
ACAGACGTCTCGATAGTATTTTTCTGTTGCGATCAATCCACGGGTTTGAC
TTGAAGCGCGACGGCCGTCTCCGCACTTTTATGCCCCAAGATTCAACGCT
CACGATCAATGTTTTCGCACCCATGCAGATTCCACCAGAAGAGCGGACGG
AGAACGGAGCAGAATACTGGCGCCTTCACGGCAAGAAACACCCCTTCGCT
CTCCGATTGGTCGCGCAGGCGGTGTACGGCGTCCCTGCCTCAGCGGGTGT
GGTGGAGCGAGATTTTAGCATCGCGGACTTGTTCATGCCCCGCAAGCGTG
CCTCGCTTGATCCAGCGTACTTGGAGATGCAGCTCTACCTGCGAGCGCAC
TTCGACAGCATCCCCATGGACATCCCCAAGCTGGACGACGCTTCCGTGGC
GGCCGCCATCCCGGACCGTTTCAGGGACCCACAGGCCGTCGAAGAGGTGC
GGGTGTTGGACTTCACCGAGGAGGAGAAGGAGGTGGGGGTTTTCGACTTC
GTGCCGGATGAGGAGGGGGACTTCGTGCCGGATGAGGAGGGGGAGGACGC
CGAGGGCCCCGAGCCGAACGTGCCCGTGCCCCCTGTCGGAGAAGTGGGGG
GGGGGGTGGCTCCAGCGGCTGGAGACGGGCAATCCACCACCAACTAG back to topCoding sequence (CDS) from alignment at Scaffold_350:74174..77670- >EsuBft1510_6a-0001 ID=EsuBft1510_6a-0001|Name=EsuBft1510_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2070bp|location=Sequence derived from alignment at Scaffold_350:74174..77670- (Ectocarpus subulatus male Bft15b)
ATGATCGTTGAGATGTACAACGCCACACTGAAGGTTGTCAACAAGGACTT
GCAGCGACAGCTTGCCCTTGCGATCATCCCGATCTTGTACGCGAACTGTG
ACATTTGGACAACCAAAGTGTCCGGAGAGAAGTTTATCGATTTGTGTTGC
AACTACTTCGCACGTTTCAACGGCGCTCAAACCACCCTTCCCGCGCCAAA
TCTCCCTATGATGGTGCTGAATTTCGTGTCAACTCTCGACGCAGCTGTGC
GCATCTTCTACATCGACTCGAGCGGGTTTCTGAGGACACACTTGTTGGCG
GTGAAGCTTTTCCGGCCGGCTCCGTCGCTCGGGAAGGTCACTGGCAAGGT
GGTGCTGAAGTGGTTCCTGCAGGTGCTGGGCCAGCACGGGATACCGATCG
AGCGCTTGGCCGGCGCCGTGACGGACGGCGGGGGTGACGTCCGGACCGGA
ATCGGCCAGGTAGCTACGCGGGCGTGGTGTGGGCCGCACATGCTCAACCG
CGTCATCATCGACGGCACCGGCATGGCCAACACAGCAAACCAGTCCAAGA
ATCTGTCGTGCCGCGGCTTGATGGAGATCTGCAAGAAGGTCGTCCAACAT
GTCAACAGATCTCAGGGGTTCAAGATCGAACTCGAGGACACGCTCGAGAA
GGCGTCCGACGGCAAGCGTTGGAAGGCGAAGCTCTCACAAGCGGTGTCCC
AGCGCTGGATCAGCCTGTGCAAGATGTTGCTCCGCATCCTAGAGCAATGG
GTCGCCATCGACAAGGTCTACGCCAGCAACCGCGAGAAATTCCCTTTGGG
AGATCTGCGCCGTGAGATGGAGGAAGTTTACAGCATGCTGAGCGAGTTCA
AGGCCGTTATCGAGTACTCCCAGACGACGCACGAGGCCACTGCGCAGAAG
GCGCTGGAGATGACTGTGGATCTTCTCACCTACACCCTCGACCCCGCGGA
GCGTCTCCGAGTGTACCACGTCGTTTCTATCGGAGCGGAGGGCGACACCA
CCAAGTACGACGACATCGAGCACGAAGACCTCACGCCGATTGGCCGCAAC
ACACGTGTCGCGTTGAGGAAAGCACTTGTGGCACGGTTTTTGCCGCGCTA
CGGCCGCGAGCTTGACGCTGGCGGCCACCTCTTTGACCGCACGATGCTTC
TCAGTCCAAACCAGAGGAAGCTGAGGTACGTGGACGCTCTGCGCTCTTCA
GCTGCCAAGGAGGGCGACATGCGGTCCTCTAGCGCCATCAAGGCGAAGAT
CAAGGAGGAGGTGACCGACCTCCTTGTCGCGGCCATCGAAGCGATTAGAG
CAACGGCACCATCGGACGGGGGGGTGGAGAGCAGTGCGGGAGGGGGGCAA
CCGCAGGCCAAGCGGGCTAAAACCACCTCTACCGCAGCGTCCAGCGCCTC
CGGTGACGGAAACGATGACCACCGGCGCCGGCGGCGCCGATTTTTAGACG
ACGACGATGAAGGCAGCGACAGCGACATGGACGCGACTCCGGTGGAGGAA
GACCCCAGGAAGGAAGCGGAGGCCATGATGAAGGAGTGGCTCGCAGCTCA
GATTCCACCAGAAGAGCGGACGGAGAACGGAGCAGAATACTGGCGCCTTC
ACGGCAAGAAACACCCCTTCGCTCTCCGATTGGTCGCGCAGGCGGTGTAC
GGCGTCCCTGCCTCAGCGGGTGTGGTGGAGCGAGATTTTAGCATCGCGGA
CTTGTTCATGCCCCGCAAGCGTGCCTCGCTTGATCCAGCGTACTTGGAGA
TGCAGCTCTACCTGCGAGCGCACTTCGACAGCATCCCCATGGACATCCCC
AAGCTGGACGACGCTTCCGTGGCGGCCGCCATCCCGGACCGTTTCAGGGA
CCCACAGGCCGTCGAAGAGGTGCGGGTGTTGGACTTCACCGAGGAGGAGA
AGGAGGTGGGGGTTTTCGACTTCGTGCCGGATGAGGAGGGGGACTTCGTG
CCGGATGAGGAGGGGGAGGACGCCGAGGGCCCCGAGCCGAACGTGCCCGT
GCCCCCTGTCGGAGAAGTGGGGGGGGGGGTGGCTCCAGCGGCTGGAGACG
GGCAATCCACCACCAACTAG back to top
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