Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft144_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 118 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_5a-0001 ID=EsuBft144_5a-0001|Name=EsuBft144_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1182bp|location=Sequence derived from alignment at Scaffold_228:559625..561128+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCTCTACCGCAGATGATGATCGGACTGGTACGAGCGGGGATCAGAC
CAGCATGCCCGGGCAGGAGGGTAGTGATGCGGAGTTTGCACGTTCGCAAC
AGCAGGTTTCGCGATTGGGGACCCTGGTGGAGGAGGCGATGGAGAAGAAA
GGGCCTGGTAACGTCGTGGTGGACGAAGCCAGTAGGGGCGGCTGGGCTGC
CGCCCCCGCAGACCAAGATGAGCCCCTACAGCCGCACGGCGGAGGTGGAG
CGGTTCTTCAGCAAGGAGCGACGAGTGGACAAGGACCACGTCAACTGTTA
GAAGGCAGCTGGGCCAGCAGATCGGGAGCGAATCCTGCGGGACCAGACGG
AGTCGGCCCAGGCGTAAGACCAGACCGCGAGGACGCGATGGGGTTCAACT
TCCCAGACAAGGCGACTGTGAACAAGTGCATGATCGTCAAGGAGATCCTC
TCCGAGCTAGAAAAGATCTACGACCCGGGGTCGCAAGGCTCGAAACATGC
CCTGATGAACAAGATGTTCCGCTTTACGATCCCTGCACACAGCAACAGCA
ACCCCATCGAGGATCTTTACACGCTCGAGCTGCTGTACTCACGCCTGCGT
GAGAAAGGACTCAACGCTGATGGACCCTTCTTCCTCCCGCACTTCGTTGC
TGTCTTCCCACCCGAGTACCAACAAGTGAAGTTTGTGTTGGAGACGGCAA
CGACGATGAACAGGGACGAGATCGTCAGGATCGCGAGCATGGCGCACTCG
AACCTCCCGGAGGAAAGGAAGGCCTCGAAGGGCAAGCGGAAAACAGAGCA
TGCCTTCCTCGCGAGCGACGGTAGCAGCGGAGGAGGAGCGCCAGGCCGCG
GCAACAGGGGCCGTCGCAAGGGTAGCGGCGGCGGCCGCGGCGGCAGCAAC
CAGAAGGGGAGAGGAGGTGGTGCAAAGGCTGGTGGTGGCAAGAGCGGTGG
AGGCGGTGGCGGCGGTGCAGGCAGCATGCGCGGTCGCTGCTTCCGGTGCG
GAGAGTTGTGTCTGCCTGCAAGAAGAGCGAGTCTGTGCGATGTGAGAAGC
GCATGGGCTACGGACACTACAAGGCAAGTGCGGGTCCGAGGAGGCGGTGC
TCGTGGTGCACTTGCCGGTGGAGGGGGCGTCTGCGGACACTACGGCACTG
GACGTGGCGGAAGAGGCGCTGGCGGTGGGTGA back to topprotein sequence of EsuBft144_5a-0001 >EsuBft144_5 ID=EsuBft144_5|Name=EsuBft144_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=393bp
MSSTADDDRTGTSGDQTSMPGQEGSDAEFARSQQQVSRLGTLVEEAMEKK
GPGNVVVDEASRGGWAAAPADQDEPLQPHGGGGAVLQQGATSGQGPRQLL
EGSWASRSGANPAGPDGVGPGVRPDREDAMGFNFPDKATVNKCMIVKEIL
SELEKIYDPGSQGSKHALMNKMFRFTIPAHSNSNPIEDLYTLELLYSRLR
EKGLNADGPFFLPHFVAVFPPEYQQVKFVLETATTMNRDEIVRIASMAHS
NLPEERKASKGKRKTEHAFLASDGSSGGGAPGRGNRGRRKGSGGGRGGSN
QKGRGGGAKAGGGKSGGGGGGGAGSMRGRCFRCGELCLPARRASLCDVRS
AWATDTTRQVRVRGGGARGALAGGGGVCGHYGTGRGGRGAGGG back to topmRNA from alignment at Scaffold_228:559625..561128+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_5a-0001 ID=EsuBft144_5a-0001|Name=EsuBft144_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1504bp|location=Sequence derived from alignment at Scaffold_228:559625..561128+ (Ectocarpus subulatus male Bft15b)
ATGAGCTCTACCGCAGATGATGATCGGACTGGTACGAGCGGGGATCAGAC
CAGCATGCCCGGGCAGGAGGGTAGTGATGCGGAGTTTGCACGTTCGCAAC
AGCAGGTTTCGCGATTGGGGACCCTGGTGGAGGAGGCGATGGAGAAGAAA
GGGCCTGGTAACGTCGTGGTGGACGAAGCCAGTAGGGGCGGCTGGGCTGC
CGCCCCCGCAGACCAAGATGAGCCCCTACAGCCGCACGGCGGAGGTGGAG
CGGTTCTTCAGCAAGGAGCGACGAGTGGACAAGGACCACGTCAACTGTTA
GAAGGCAGCTGGGCCAGCAGATCGGGAGCGAATCCTGCGGGACCAGACGG
AGTCGGCCCAGGCGTAAGACCAGACCGCGAGGACGCGATGGGGTTCAACT
TCCCAGGTGAGCAAACCACTATCCGTGGGGCCGGAGCTTTTTTGGGTGGA
TACAGCAGTGGCCACCAAAACACGTCACGGTTACGGCGCCGCGGTTTCAA
GGAGAGAGTCTCGGCCACGGGTTTGACTCGAGGAGAAAGGGGCTCGTTCA
AGCCTCCGAAACTGTAGGCTTGGACGGACAATTGATCACAACGCCGAGAG
ACATGCACCCGTCGGCGACCCATACATACCAAGCTCGGAGCTGTATAGTC
TGGGGTACACGAGCGACGAGGTCCACAGGGGCCTCCAAGCTTTCCATTTC
GTGTCCACGGCAATTGCCAGAGAAGCAGACAAGGCGACTGTGAACAAGTG
CATGATCGTCAAGGAGATCCTCTCCGAGCTAGAAAAGATCTACGACCCGG
GGTCGCAAGGCTCGAAACATGCCCTGATGAACAAGATGTTCCGCTTTACG
ATCCCTGCACACAGCAACAGCAACCCCATCGAGGATCTTTACACGCTCGA
GCTGCTGTACTCACGCCTGCGTGAGAAAGGACTCAACGCTGATGGACCCT
TCTTCCTCCCGCACTTCGTTGCTGTCTTCCCACCCGAGTACCAACAAGTG
AAGTTTGTGTTGGAGACGGCAACGACGATGAACAGGGACGAGATCGTCAG
GATCGCGAGCATGGCGCACTCGAACCTCCCGGAGGAAAGGAAGGCCTCGA
AGGGCAAGCGGAAAACAGAGCATGCCTTCCTCGCGAGCGACGGTAGCAGC
GGAGGAGGAGCGCCAGGCCGCGGCAACAGGGGCCGTCGCAAGGGTAGCGG
CGGCGGCCGCGGCGGCAGCAACCAGAAGGGGAGAGGAGGTGGTGCAAAGG
CTGGTGGTGGCAAGAGCGGTGGAGGCGGTGGCGGCGGTGCAGGCAGCATG
CGCGGTCGCTGCTTCCGGTGCGGAGAGTTGTGTCTGCCTGCAAGAAGAGC
GAGTCTGTGCGATGTGAGAAGCGCATGGGCTACGGACACTACAAGGCAAG
TGCGGGTCCGAGGAGGCGGTGCTCGTGGTGCACTTGCCGGTGGAGGGGGC
GTCTGCGGACACTACGGCACTGGACGTGGCGGAAGAGGCGCTGGCGGTGG
GTGA back to topCoding sequence (CDS) from alignment at Scaffold_228:559625..561128+ >EsuBft144_5a-0001 ID=EsuBft144_5a-0001|Name=EsuBft144_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1182bp|location=Sequence derived from alignment at Scaffold_228:559625..561128+ (Ectocarpus subulatus male Bft15b)
ATGAGCTCTACCGCAGATGATGATCGGACTGGTACGAGCGGGGATCAGAC
CAGCATGCCCGGGCAGGAGGGTAGTGATGCGGAGTTTGCACGTTCGCAAC
AGCAGGTTTCGCGATTGGGGACCCTGGTGGAGGAGGCGATGGAGAAGAAA
GGGCCTGGTAACGTCGTGGTGGACGAAGCCAGTAGGGGCGGCTGGGCTGC
CGCCCCCGCAGACCAAGATGAGCCCCTACAGCCGCACGGCGGAGGTGGAG
CGGTTCTTCAGCAAGGAGCGACGAGTGGACAAGGACCACGTCAACTGTTA
GAAGGCAGCTGGGCCAGCAGATCGGGAGCGAATCCTGCGGGACCAGACGG
AGTCGGCCCAGGCGTAAGACCAGACCGCGAGGACGCGATGGGGTTCAACT
TCCCAGACAAGGCGACTGTGAACAAGTGCATGATCGTCAAGGAGATCCTC
TCCGAGCTAGAAAAGATCTACGACCCGGGGTCGCAAGGCTCGAAACATGC
CCTGATGAACAAGATGTTCCGCTTTACGATCCCTGCACACAGCAACAGCA
ACCCCATCGAGGATCTTTACACGCTCGAGCTGCTGTACTCACGCCTGCGT
GAGAAAGGACTCAACGCTGATGGACCCTTCTTCCTCCCGCACTTCGTTGC
TGTCTTCCCACCCGAGTACCAACAAGTGAAGTTTGTGTTGGAGACGGCAA
CGACGATGAACAGGGACGAGATCGTCAGGATCGCGAGCATGGCGCACTCG
AACCTCCCGGAGGAAAGGAAGGCCTCGAAGGGCAAGCGGAAAACAGAGCA
TGCCTTCCTCGCGAGCGACGGTAGCAGCGGAGGAGGAGCGCCAGGCCGCG
GCAACAGGGGCCGTCGCAAGGGTAGCGGCGGCGGCCGCGGCGGCAGCAAC
CAGAAGGGGAGAGGAGGTGGTGCAAAGGCTGGTGGTGGCAAGAGCGGTGG
AGGCGGTGGCGGCGGTGCAGGCAGCATGCGCGGTCGCTGCTTCCGGTGCG
GAGAGTTGTGTCTGCCTGCAAGAAGAGCGAGTCTGTGCGATGTGAGAAGC
GCATGGGCTACGGACACTACAAGGCAAGTGCGGGTCCGAGGAGGCGGTGC
TCGTGGTGCACTTGCCGGTGGAGGGGGCGTCTGCGGACACTACGGCACTG
GACGTGGCGGAAGAGGCGCTGGCGGTGGGTGA back to top
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