Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft144_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 375 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_4a-0001 ID=EsuBft144_4a-0001|Name=EsuBft144_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3757bp|location=Sequence derived from alignment at Scaffold_228:583848..588176+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGCGGGCGGGGGGGCGAGTGCGCTCGCGAGGTCCAACGCCAAAGAGGAGG
CGAGGAGGGAGGCCACCATTTGGCAGGCCAAATATTATCAGACACTCTAG
GTACTTCGGGGGCAGCGGGGGCCGGAGCCCGGGCCACAGAAGGAGGACCT
GCAGGGTGTAATGGGCGATATCGTCCACGTCACGGGCAACGTCCTCGCTC
AGATGCGTGCGTTGTTGTCTTTCGACGTCAAGAGCTTCCGGCCCGTGGGG
GTTGCCCGCACGTTGTCTATTGCAGACAACTTCGACGTAATGATTGCGGT
GATGCGGCTGTTGAAGTTTGGTCTAGATTCGTCCACGACCGCGGGTGTGC
AATCGTTGCGGCGGTTGGAACCCATAGCCACAGTCATGGCGGACGCGCGC
TCCAGGTTTCGGACTACTCTCGTGCGGAATAGTGATGTGTTTCCGGACGA
GTACCAGCGGGCGGCACTGCCAAGGTTGCTGAACGAGGACTTCAAATTGT
CGACAACGGCGATCATCACCTGGATGTACCCCTTCACGAAGATGCATTAT
CCGCCGGATGCGTTCGACGGCCACACCTTGCCGCCGGTGCCCGAGTTCCC
CAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGC
AAACGGGCCACTACTTTCGATATGATCTGTCTGTGGAAGAGCAAGCTTGC
TTTGTGGGGTTGCGCAAATCGGTCCAGGGGGTTAATGATGTCAGCATCAA
CGTGTTAGAGCTCCTTGGCATGGTCATCGGGGCGTGGGTGTTGGTATTGG
ATCGAAGTCACCAGCCTGTGGAGGCGGGTGATTGTGTGCGACTTCGAGAA
GACAACGAAGCAGCGACGGCGTGGATTGAGCATTGTCGGGGGGGCCTTGA
GCCTCGATCGGGGGCGCTGGTGCGCCTACTGGGGGCGCTGGAGGTAGCCA
GCGGGTGGCATTTCCACGCGACCCATGTTCCCGGCATACTCAACTCGCTT
GCTGATGGTATCTCACGTTGGAATACTAACGATGTTCATGATAACCTGTG
CGCTGCCTCCCCTCATGTGGCGTGGCAGATCGTGGAGTTAGGCCCGACGG
AGCGCGAGTTGTGCTCCACCGTGCTGGCTTCGAGCTCGTCCGGCACGCAC
TTGCGCCGTCGTCTGAACGAACTTTCCTGGGATTTATTGGAGCGTGGGTG
AAGTTTCGAGAGAACGTTGTGGGGAGACCGGCGTTTATGGTGCCGTCGTC
TCCATCGCCGGACATTGTTTCGCAATTGTTGGAGTACGTGGCATACGCGT
TCACAGTGTTGGGCTTGAGGCAGACGACGATAGCTGGTCATGTCTGCTGT
AATTTTTTTTCACCGCTTGTCGTATGCGATGGAAGTTGATATATGTCATT
CTTTCATCAAGCAGGCGCCTAAAGGCGTGGCGCGAGGGCATGCGGGTGTT
GGTGCGCAGCAACGGGTGCGACGTCCGGTGTCGTGGTCGATGCTGAAGGA
AAGGGGGCGTCTGGTGCCACAGTGGGGCACGGGTGGGCGCGTGTTGTTTC
TGGCGTTGAGAGCGTCATTTTTTTCTTGATGCGGGCATGCGAAATGTTCG
CTGGGCCCTCGGTTGGCCATGGATTCTTGTCATGGGTTGCGTCGGGGGGA
CTTGGCGTTTTTTTTTGGGTTCTCGCCAGTTGTCTCCTGAACGGAGGGGA
GAGGCCGACAGAGTCGAGGTGCGGTTTCGGTCGTCGAAAGGCGACCAGTT
TCGGAAGGGTGCCGTGTGTACGCAGGCGAGGCCGGGGGCTCCCCAGTCTG
TGGAGTGTGGGGAGGGTGAGGTCGATGTGATGATTGAACTCCTGTCATGC
TACCCTGTTCTCCCTTCGTCTGCTCCGTTAGTCGCGTTCGGAACCGGGGA
GGGGCGATAGTCCGTGTGGACTCGTCGTCACGCGACGGAATCGCTGCGGC
AAGTCGGGTCGTTAGCGGGTCTGCCGTCGTCAGAGTACGCGTTGCATTCC
CTTCGGATTGGGGGCGCCACGTACTTGGCAGCGCGGGGAGCGTCGCCAGA
AGTTCTGAGACGAGAGGGGAGATGGACTGGGGAATCGGGGAATCGGCCGT
ACGTAGGGAACCATGGAAATGATGCAGAGTTGGTTTCTAGTACATTGGCG
TCGGAGGGTGATACAGAGAGGCAACCGGGACAGGGTACAGAGTGGGGTGA
CGCAGTCCCTGAGGCTGGTGAGGGCGAGCCGTAAAAGGAAGGGGTGGAGT
GTATGCGATCAGGGTTTATTGGTCGGTACAAGAGTGGGAACCACGGTAGG
GGGGAAGAGAGAGTACAGATCAGTATGGTAAACCAGTCCGCGGTTAGGTT
GGGGGCAGGCATGACTTTGAGAGTATGCCTGATGGTGCGGTGACTGGTTT
ATACTGATGGTGTTGTGGACGGGGATAGGTTGAGATCCCCGAGTTCCGCT
CTTCTCTCCCCCCCCTGTTCAAGCGTGGGGGGGTACGACAAATTCATGCA
ATTTCGAAAGCAACGAACAAAGCAGAAGATTGCAGAGACAGAGGCGTTGA
AATCTGAGTTTTGTGAGGAACGGAAGATGAAATATCTGTTGGCCAATCAG
AGAGCAGCAACATGGAGTCAGCATGAAGTGTCTGAAACCTGACCAGAAGA
GTAGACTTGGGAGCACTTGTTGGTCTGCCCCAAGGAAGCACGAGGGAGGC
TGCTGCAGCCAAAAGATATTTCGGAGGCGATCTATTTCTTTCCCACCCAC
CCACCCTTTAGCTTTTGGGGGTGTCAGTGGTAGGGCAAGGACGGATCGCC
AGCAGTAGTGAATGAGGAAGGTGTCGTCGTTTGGCGATACTGCTGATGGG
GCGAGGGTTTCTTGGGTAGATGGTCCTTGCCTGGGTGTGTCTGTCGCGTT
AGAGATGCTGGCGGTACTCTCAGTGCGGGTGAGAGCGCCTAAGTTGCTGT
GCCACGAGCGACGAGTGCACAATGACTGGATGATTGGTTATGGTCGACAG
GGTCGGCTGTAGCCGTGGGCCGGCGGTCGGGGGGCGGGTGCAAACCCAAC
GTGTGGGTTCGTGGGGTACCGCGTGTGTGCGACCGTTGACGAGCTTGACG
AGGTAGCGCGACTAAATAGACATGGGCATGCAGTGGTGTAGTTCACGGTG
CATCACAATCAATGTGATATGTGTGCGGTATATTGAGGTCGGTATATCGG
AACATGCGTGCAATTTGGAGAGAAGAGAGTGTGGGGAGCACCCGACATCC
CAGGGGGAGTGAGCGCGCAAATGTAAGTTGTTGTTAACAGCTGGCGCTGA
GTGAGAGGGGGATTAGTGCGGTGCTAGGAGTATTTCCAGTCCATGCTCAT
GTACATGAAATACAACTGTGTGGGGCTTTGAGGTGCCGGGCAATTTTTGT
TTCTGTTTTTTGCATTTCCTTTCTGTGAAAATGTAGCTCGGCATTCTCTA
TGCATACGTATGTTTCGGAGTCTGTGGAGGACAGGGGGCAGGCATGACTT
TGAGAGT back to topprotein sequence of EsuBft144_4a-0001 >EsuBft144_4 ID=EsuBft144_4|Name=EsuBft144_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=150bp
MGDIVHVTGNVLAQMRALLSFDVKSFRPVGVARTLSIADNFDVMIAVMRL
LKFGLDSSTTAGVQSLRRLEPIATVMADARSRFRTTLVRNSDVFPDEYQR
AALPRLLNEDFKLSTTAIITWMYPFTKMHYPPDAFDGHTLPPVPEFPNXX back to topmRNA from alignment at Scaffold_228:583848..588176+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_4a-0001 ID=EsuBft144_4a-0001|Name=EsuBft144_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4329bp|location=Sequence derived from alignment at Scaffold_228:583848..588176+ (Ectocarpus subulatus male Bft15b)
CGCGGGCGGGGGGGCGAGTGCGCTCGCGAGGTCCAACGCCAAAGAGGAGG
CGAGGAGGGAGGCCACCATTTGGCAGGCCAAATATTATCAGACACTCTAG
GTACTTCGGGGGCAGCGGGGGCCGGAGCCCGGGCCACAGAAGGAGGACCT
GCAGGGTGTAATGGGCGATATCGTCCACGTCACGGGCAACGTCCTCGCTC
AGATGCGTGCGTTGTTGTCTTTCGACGTCAAGAGCTTCCGGCCCGTGGGG
GTTGCCCGCACGTTGTCTATTGCAGACAACTTCGACGTAATGATTGTGTG
NACGCCAAAGAGGAGGCGAGGAGGGAGGCCACCATTTGGCAGGCCAAATA
TTATCAGACACTCTAGGTACTTCGGGGGCAGCGGGGGCCGGAGCCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTTTTTTTTTCTCCCATCATTGGACTCTGTCGTCTGCC
CCTCTGGCCCCTATCCTCCACTTCTACCAGCCAGACGATCCAACCGGGGT
CACATAGGAGGGGGGGGCTGGGCCCCCTCCTGCGGTTCCTACCTGAGGTA
TTTTTATCGCGAGAAGGGTACAGCAATACCTTCCCTCGCGACTTACCAAG
TCGATTATGGCTTTCTAACAAACGAGCTTTGCAGCGCGTCGCTTTCATCC
TAGACCAGGATATATTTAGTGAAAAAAAAACTCACTCTGCCGGGACTCGA
ACCCATGACCTGGCCCTTAGCAGGCTGCGAGGCTACCCACTAGACCACCG
GGGCAACCGTGGGTGAGGCGGTGATGCGGCTGTTGAAGTTTGGTCTAGAT
TCGTCCACGACCGCGGGTGTGCAATCGTTGCGGCGGTTGGAACCCATAGC
CACAGTCATGGCGGACGCGCGCTCCAGGTTTCGGACTACTCTCGTGCGGA
ATAGTGATGTGTTTCCGGACGAGTACCAGCGGGCGGCACTGCCAAGGTTG
CTGAACGAGGACTTCAAATTGTCGACAACGGCGATCATCACCTGGATGTA
CCCCTTCACGAAGATGCATTATCCGCCGGATGCGTTCGACGGCCACACCT
TGCCGCCGGTGCCCGAGTTCCCCAACATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGTTTGCAAACGGGCCACTACTTTCGATATGATCT
GTCTGTGGAAGAGCAAGCTTGCTTTGTGGGGTTGCGCAAATCGGTCCAGG
GGGTTAATGATGTCAGCATCAACGTGTTAGAGCTCCTTGGCATGGTCATC
GGGGCGTGGGTGTTGGTATTGGATCGAAGTCACCAGCCTGTGGAGGCGGG
TGATTGTGTGCGACTTCGAGAAGACAACGAAGCAGCGACGGCGTGGATTG
AGCATTGTCGGGGGGGCCTTGAGCCTCGATCGGGGGCGCTGGTGCGCCTA
CTGGGGGCGCTGGAGGTAGCCAGCGGGTGGCATTTCCACGCGACCCATGT
TCCCGGCATACTCAACTCGCTTGCTGATGGTATCTCACGTTGGAATACTA
ACGATGTTCATGATAACCTGTGCGCTGCCTCCCCTCATGTGGCGTGGCAG
ATCGTGGAGTTAGGCCCGACGGAGCGCGAGTTGTGCTCCACCGTGCTGGC
TTCGAGCTCGTCCGGCACGCACTTGCGCCGTCGTCTGAACGAACTTTCCT
GGGATTTATTGGAGCGTGGGTGAAGTTTCGAGAGAACGTTGTGGGGAGAC
CGGCGTTTATGGTGCCGTCGTCTCCATCGCCGGACATTGTTTCGCAATTG
TTGGAGTACGTGGCATACGCGTTCACAGTGTTGGGCTTGAGGCAGACGAC
GATAGCTGGTCATGTCTGCTGTAATTTTTTTTCACCGCTTGTCGTATGCG
ATGGAAGTTGATATATGTCATTCTTTCATCAAGCAGGCGCCTAAAGGCGT
GGCGCGAGGGCATGCGGGTGTTGGTGCGCAGCAACGGGTGCGACGTCCGG
TGTCGTGGTCGATGCTGAAGGAAAGGGGGCGTCTGGTGCCACAGTGGGGC
ACGGGTGGGCGCGTGTTGTTTCTGGCGTTGAGAGCGTCATTTTTTTCTTG
ATGCGGGCATGCGAAATGTTCGCTGGGCCCTCGGTTGGCCATGGATTCTT
GTCATGGGTTGCGTCGGGGGGACTTGGCGTTTTTTTTTGGGTTCTCGCCA
GTTGTCTCCTGAACGGAGGGGAGAGGCCGACAGAGTCGAGGTGCGGTTTC
GGTCGTCGAAAGGCGACCAGTTTCGGAAGGGTGCCGTGTGTACGCAGGCG
AGGCCGGGGGCTCCCCAGTCTGTGGAGTGTGGGGAGGGTGAGGTCGATGT
GATGATTGAACTCCTGTCATGCTACCCTGTTCTCCCTTCGTCTGCTCCGT
TAGTCGCGTTCGGAACCGGGGAGGGGCGATAGTCCGTGTGGACTCGTCGT
CACGCGACGGAATCGCTGCGGCAAGTCGGGTCGTTAGCGGGTCTGCCGTC
GTCAGAGTACGCGTTGCATTCCCTTCGGATTGGGGGCGCCACGTACTTGG
CAGCGCGGGGAGCGTCGCCAGAAGTTCTGAGACGAGAGGGGAGATGGACT
GGGGAATCGGGGAATCGGCCGTACGTAGGGAACCATGGAAATGATGCAGA
GTTGGTTTCTAGTACATTGGCGTCGGAGGGTGATACAGAGAGGCAACCGG
GACAGGGTACAGAGTGGGGTGACGCAGTCCCTGAGGCTGGTGAGGGCGAG
CCGTAAAAGGAAGGGGTGGAGTGTATGCGATCAGGGTTTATTGGTCGGTA
CAAGAGTGGGAACCACGGTAGGGGGGAAGAGAGAGTACAGATCAGTATGG
TAAACCAGTCCGCGGTTAGGTTGGGGGCAGGCATGACTTTGAGAGTATGC
CTGATGGTGCGGTGACTGGTTTATACTGATGGTGTTGTGGACGGGGATAG
GTTGAGATCCCCGAGTTCCGCTCTTCTCTCCCCCCCCTGTTCAAGCGTGG
GGGGGTACGACAAATTCATGCAATTTCGAAAGCAACGAACAAAGCAGAAG
ATTGCAGAGACAGAGGCGTTGAAATCTGAGTTTTGTGAGGAACGGAAGAT
GAAATATCTGTTGGCCAATCAGAGAGCAGCAACATGGAGTCAGCATGAAG
TGTCTGAAACCTGACCAGAAGAGTAGACTTGGGAGCACTTGTTGGTCTGC
CCCAAGGAAGCACGAGGGAGGCTGCTGCAGCCAAAAGATATTTCGGAGGC
GATCTATTTCTTTCCCACCCACCCACCCTTTAGCTTTTGGGGGTGTCAGT
GGTAGGGCAAGGACGGATCGCCAGCAGTAGTGAATGAGGAAGGTGTCGTC
GTTTGGCGATACTGCTGATGGGGCGAGGGTTTCTTGGGTAGATGGTCCTT
GCCTGGGTGTGTCTGTCGCGTTAGAGATGCTGGCGGTACTCTCAGTGCGG
GTGAGAGCGCCTAAGTTGCTGTGCCACGAGCGACGAGTGCACAATGACTG
GATGATTGGTTATGGTCGACAGGGTCGGCTGTAGCCGTGGGCCGGCGGTC
GGGGGGCGGGTGCAAACCCAACGTGTGGGTTCGTGGGGTACCGCGTGTGT
GCGACCGTTGACGAGCTTGACGAGGTAGCGCGACTAAATAGACATGGGCA
TGCAGTGGTGTAGTTCACGGTGCATCACAATCAATGTGATATGTGTGCGG
TATATTGAGGTCGGTATATCGGAACATGCGTGCAATTTGGAGAGAAGAGA
GTGTGGGGAGCACCCGACATCCCAGGGGGAGTGAGCGCGCAAATGTAAGT
TGTTGTTAACAGCTGGCGCTGAGTGAGAGGGGGATTAGTGCGGTGCTAGG
AGTATTTCCAGTCCATGCTCATGTACATGAAATACAACTGTGTGGGGCTT
TGAGGTGCCGGGCAATTTTTGTTTCTGTTTTTTGCATTTCCTTTCTGTGA
AAATGTAGCTCGGCATTCTCTATGCATACGTATGTTTCGGAGTCTGTGGA
GGACAGGGGGCAGGCATGACTTTGAGAGT back to topCoding sequence (CDS) from alignment at Scaffold_228:583848..588176+ >EsuBft144_4a-0001 ID=EsuBft144_4a-0001|Name=EsuBft144_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=450bp|location=Sequence derived from alignment at Scaffold_228:583848..588176+ (Ectocarpus subulatus male Bft15b)
ATGGGCGATATCGTCCACGTCACGGGCAACGTCCTCGCTCAGATGCGTGC
GTTGTTGTCTTTCGACGTCAAGAGCTTCCGGCCCGTGGGGGTTGCCCGCA
CGTTGTCTATTGCAGACAACTTCGACGTAATGATTGCGGTGATGCGGCTG
TTGAAGTTTGGTCTAGATTCGTCCACGACCGCGGGTGTGCAATCGTTGCG
GCGGTTGGAACCCATAGCCACAGTCATGGCGGACGCGCGCTCCAGGTTTC
GGACTACTCTCGTGCGGAATAGTGATGTGTTTCCGGACGAGTACCAGCGG
GCGGCACTGCCAAGGTTGCTGAACGAGGACTTCAAATTGTCGACAACGGC
GATCATCACCTGGATGTACCCCTTCACGAAGATGCATTATCCGCCGGATG
CGTTCGACGGCCACACCTTGCCGCCGGTGCCCGAGTTCCCCAACATNNNN back to top
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