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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft144_26 |
| Protein domains | IPR017938 |
| Protein domains | PTHR19446 |
| Protein domains | IPR001433 |
| Protein domains | IPR000477 |
| Protein domains | Coil |
| Protein domains | G3DSA |
| Protein domains | SSF52343 |
| Protein domains | SSF56672 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | fruit protein pkiwi502 os:actinidia deliciosa gn:pkiwi502 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1536 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.3e-93 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Ec32 ortholog description | Oxidoreductase FAD/NAD(P)-binding |
| Ec32 ortholog | Ec-11_002290.3 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016491 |
| GO | 0055114 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_26a-0001 ID=EsuBft144_26a-0001|Name=EsuBft144_26a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1536bp|location=Sequence derived from alignment at Scaffold_228:372775..377488- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTCAACGTCGAGAATGCGCGATTACGCGCTCTCCCACCGTTTGTCT
CAACCGAAGCCTTTTTTCGCTCTCCCCTCCCGCTCACATTGAGCAGGGGG
TCCCACAAGGTTGCACGCTGTCCCCACCATTGTTCCAGGTGTTCATCAAC
GATCTATTGGAAGTCGTAGAGGCAGTTCGAAAGGGAGTAAAAGTAGGGGA
CACGGAAACTTCGGTTTCAGGAATACTGTTTGCGGATGATTTTGTCGGTA
TGTCGGACACCCCTGAGGGACTGCAACTGCAAATCGACGCGGCGAAGAAG
TTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCAT
GGTATGCAACGAGGACAAGGAGGACCCAGTAGAACATAGATGGAAGTGGG
AGATCGAGGAGATTGCAGTATTGGACCAGTACACATACCTGGGAGTAGAG
ATCACAAAAGACTGCTCGTGGAATGCACACATGTCCAACGTAGCGGAAAA
GGGCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACCGGCACC
TCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCG
CTAGAGTACGCAGGAGAAATATGTGAAGGAAATAAGAAGGTAGTGAAAGA
ACTCGAGGCGGCGCAGATGAAAGCAGCGAAAACCATCCTAGGATGCTCCA
GGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAATCCCTA
CGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCGG
GATGGGAGAGGAGAGGTTGCCGAGAATTGCATGGGAGGCAAAGTGGGCAA
ACAAAAAGAGGGGTAGACAACCCAAGGAATGGGTCATGGTTGTAGAGGAC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAGACTAG
GGAAGACATTTTTGAGCCACCTTTGGGAAGAGGGCCATTACGCGCTGACG
ATCGACGTCGGGGACATCGCCAAGGAGTACACGGTACCGGGCCAGTACGT
GCAGATCAAGGTGACCTCCAGCGATAAGCCGAGGTTCTTCGCGATCGCCT
CTCCCCCGGATGCCAGGGAGAACGACGCGACGGAGGCGCTGGTCGGGGTC
AAGGCCGGGGGCTCCGTGGAGGTTTCCCCCGTCATGGGCAAGGGGTTCCC
CATCACGGAGAACTTCACCGGATACAAGTACGACTTCCCCGTACAGAACG
TCGTGCTGTCGGCGTCGGGCACCGGTATCGCTCCTTTCCGCGCGGCAATC
GAGTCCGGGGCGCTGGAGCTGCCGGATGCGGACGATGACGGGGTGTTCGG
TCGGTCGTGCAAGCTGTACTGGGGCTGCCGCGACGAGGAGAGCATACCGT
GGAAGGACCGGGTGAAGGCGTGGGACAAGCAGGGCGTCGAGGTGGTGATC
GTCCTCTCTGAGCCAAGTGAGTTGAGAGCGGNNNNN back to topprotein sequence of EsuBft144_26a-0001 >EsuBft144_26 ID=EsuBft144_26|Name=EsuBft144_26a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=512bp
MFQRRECAITRSPTVCLNRSLFSLSPPAHIEQGVPQGCTLSPPLFQVFIN
DLLEVVEAVRKGVKVGDTETSVSGILFADDFVGMSDTPEGLQLQIDAAKK
FTDKWRLSANVKKSAVMVCNEDKEDPVEHRWKWEIEEIAVLDQYTYLGVE
ITKDCSWNAHMSNVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPP
LEYAGEICEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSL
RSGRDARKLTWQYRMCGMGEERLPRIAWEAKWANKKRGRQPKEWVMVVED
XXXXXXXXXXXXXXXXXXXXEKAGRDIVRIDRLGKTFLSHLWEEGHYALT
IDVGDIAKEYTVPGQYVQIKVTSSDKPRFFAIASPPDARENDATEALVGV
KAGGSVEVSPVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAI
ESGALELPDADDDGVFGRSCKLYWGCRDEESIPWKDRVKAWDKQGVEVVI
VLSEPSELRAXX back to topmRNA from alignment at Scaffold_228:372775..377488- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_26a-0001 ID=EsuBft144_26a-0001|Name=EsuBft144_26a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4714bp|location=Sequence derived from alignment at Scaffold_228:372775..377488- (Ectocarpus subulatus male Bft15b)
ATGTTTCAACGTCGAGAATGCGCGTAAAAAGTAAAAGCAGAAGGCGAGCG
GGATCTGCTTTTCGATTGTCAATCCTTATCCGTCGTCACGCCGTCTTACC
CGTGGGTCCGTCCTGCTACGTATTTGCTTCCTGCCTTGATACTCTGGCTG
AAGAGCTCCGATTCGGGGGTCAAGCTCTTCGTCTCCATCGAACATGCATT
TCTTTGCCTTCGCTTTCCATCGTCAGGATTACGCGCTCTCCCACCGTTTG
TCTCAACCGAAGCCTTTTTTCGCTCTCCCCTCCCGCTCACATTGAGCAGG
GGGTCCCACAAGGTTGCACGCTGTCCCCACCATTGTTCCAGGTGTTCATC
AACGATCTATTGGAAGTCGTAGAGGCAGTTCGAAAGGGAGTAAAAGTAGG
GGACACGGAAACTTCGGTTTCAGGAATACTGTTTGCGGATGATTTTGTCG
GTATGTCGGACACCCCTGAGGGACTGCAACTGCAAATCGACGCGGCGAAG
AAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGCCGT
CATGGTATGCAACGAGGACAAGGAGGACCCAGTAGAACATAGATGGAAGT
GGGAGATCGAGGAGATTGCAGTATTGGACCAGTACACATACCTGGGAGTA
GAGATCACAAAAGACTGCTCGTGGAATGCACACATGTCCAACGTAGCGGA
AAAGGGCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACCGGC
ACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCG
CCGCTAGAGTACGCAGGAGAAATATGTGAAGGAAATAAGAAGGTAGTGAA
AGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAACCATCCTAGGATGCT
CCAGGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAATCC
CTACGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTATCGCATGTG
CGGGATGGGAGAGGAGAGGTTGCCGAGAATTGCATGGGAGGCAAAGTGGG
CAAACAAAAAGAGGGGTAGACAACCCAAGGAATGGGTCATGGTTGTAGAG
GACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAGAC
TAGGGAAGACATTTTTGAGCCACCTTTGGGAAGGTAGAAAGGAACGATTG
GCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGACG
CGTGGTCAATGGTCTAACCGCTACGGCATGCGCCCCCCGCCCCCCGCCCC
CCTCCCGCTCTCTCCCCACCTCCGCCCCTCTCTGCTTTTGTCGTCGTTTC
TCTCCCGCGACTCTCGTCTCGGCACCCTCGTTCCGCCTAGGCCAAGGTAG
TCGAGACGGCCAAGGTGAGCGTAGCCAGTTTGTGCCGGAGCAAGAGGTTA
GGCAGTCCCGAGTGTTGATGTGGTAGATCCGCAGCAGAGTATGGTATGTA
GCAGCACGGCGAGGTGCGGCGAAGTGTGTGAGTTCGTTTCAACCCCCATC
ATCTGGGCAAGCGCTGGCATGTCTGTTTACCACGGTAGTGTGCGTTCTGA
TCGACGTTGTTTTTGGTGCTGGTGCTGCTGCCGCTCTTGTTGCCTGTGAT
CAGATTGCAGAGCGCGTACCCCATTATCTGGACAAGCGCTGGCATGCCTG
CACCGCATTAGTCAACGTTCTGGTTGGCGCTGTTTTGGTTGCTACTGCTG
CTGCTGCTGCTGCTGCTGCTGCCGCTGCTGTTGCCCTTGCTCAGATCGCC
GCTGGCATGTCTGTGTATCAAAATACTGTATGTTCTGGTCGGCGTTGTTG
TTGTTGGGCTGCTGGTGCTGCTGGTGCTGCTGCTGATGATGATTCTGCTG
ATTCCGCTGATTCTGCTGATTCTGCTACCGCTGCTGTTGCCCTTGCTCAG
ATCGCAGAGGGCCATTACGCGCTGACGATCGACGTCGGGGACATCGCCAA
GGAGTACACGGTACCGGGCCAGTACGTGCAGATCAAGGTGACCTCCAGCG
ATAAGCCGAGGTTCTTCGCGATCGCCTCTCCCCCGGATGCCAGGTACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACGACTTTTGTCCGATCTGA
TCTGATCGAGAACGCCGCTCTCTTGTTGTGCTTGCTCCCCTCGGAAACCC
ACAACCTCGCCCCGCACTCGGGGAGCAATGGGTTGCACTCACTCGGACTC
GGTACTGCTGCAGCTTGCAGTGTTTTCCCCGTGCATGTTCGAGACTCCCT
TTGCTTCTTGTCTTGTTGTGAGCGTGCTGTCTACTTCACAGCACCCCCGC
TCGCTCGCTCGCTCGCTCGCGCTCTCTCTCTCTCCGTCCCTCTTCAGCTG
CATCATCACGTTTTTTTTTTTCTTGTCCATATTTTCTGATCGCCAGCATA
TCCCTTTCGGGATATATGTCTGCCGCAAGGTCAGTACAAGTGGGAGAAAA
ACGCTCCGAAAAACAAACTTTAGATCATCTCCAGCGCAGACCCCAAGTGG
CAGCGCGCCAAGAAGTCTACATGTAGACACAAGGTTGGTTGTGCACGATA
TTGCATTCCACTTCCAACTAAACGTTGCCGGATGTCATTGCTTCGCGCAT
TTCCTTCCACAAAACTGTGGAGGGCTCATGTTGGACTTCTCCACCGACTA
TTGCAACAGGCCCATCCACTCCCCACCGGAGGTGTGGAAACGCTGTTCAA
AGACAAATCAACCACGCCTTTCTGTTGAGACCAAAGCGTTCGCTCACTGT
ATGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTG
CTTTTTCTTATGCTTCCCCTTGTGCTCATCCCCATCCGCATCCTTACCCG
TCTGATTGGGCGACGCATGTACTCCCCGCCCCTTCTTCTTCCTTTTTCCC
CCCTGCACTGAACCCTCATCCATATCCTTGTCCTTATCCTTGTCCTTCTC
GTGGGGCGACGGCGGTAGCAGCAGCGGCTCCCTGGAGTTCCTGATCAGGG
AGAACGACGCGACGGAGGCGCTGGTCGGGGTCAAGGCCGGGGGCTCCGTG
GAGGTTTCCCCCGTCATGGGCAAGGGGTTCCCCATCACGGAGAACTTCAC
CGGATACAAGTACGACTTCCCCGTACAGAACGTCGTGCTGTCGGCGTCGG
GCACCGGGTAAGTGAGTGCGTATTCTCTGCTACTATTTGCAGAGCGCTGT
TGAACCTGTCGTGTGGCGTGCTTACGTTACAGATATGCATAGCGCCTGTG
CTATGATCCTCTGCTTTTTGCGGAGGCTTGGGGTCCTTAGCTCCTCTCGT
GGGCTACAAATGGCGGCGACAGTAGGGGTTCTTGACCAGGCTCACAAATG
ATGGTCCACGTTCTTCTTACGTTTGATATAGCGCTGAATAACTGTCGATT
CACGTTTTTTTGGCTGTCGCAAGGCTGGCAGTGGAGCGGACGCAGCCCAA
ATTTTGGTGGTTGCGTGTATGACATGCGTGTACAAATGAAATAGCCTGTG
AAATGTGAATCCTCTAAGGGCACATGTGACACCACTGCGATGTTGCCAGG
TGAAGGGTGTGTGCCGGATACTCAAAAAAGAGTATTTTATCCAGGGTACA
AATTGCTACCCCGCGTGGAAGCTTTTACCAACCACCAAGATCGGCAGGTC
GAAAAGACACAGGCATTGCTGTGTCGTTGACAAAATATTTTTTTGCAACA
GATGCTTCGGTTTCGTTTGTTTTTTTTTCGGAGTCGACCGCTACTCCTCT
TTTGTGATGATTTTTTATGCTGCGAAAGGGTCGGGCATGAACCAAACCAG
GTAGAACCCCCCCCCTCCCTCCATTTCGGAGGTGTGTGGCAGAAGACAAT
GCAAAGAACGACCGTATGCATAGGCCCTCTCCCGCGGCAACAGCGCGAAT
CGACAGGAGGTTGTAGGATAAGGCAATGCCGGTGTCCTTTCCCGTTTCGT
GATACGGTGCCCCACGGATCGGTGTTCCCGATGCGAATCCCCCCCCGTTG
GCCTCGGGAAAAGAAAAGCGAATTTCCGTCTTGAGGTGGAACCGGCGTGT
GAAATAGATGGTACGAACTGCTGCCCGAATATCCTTGAGCTCATGGCGTT
GTGACTGCCAGAAGCGCGATGGAGCGCACCGTGAATAGCGCCCTCGCTGG
CGCACTGGACGGTTTCGTCCAACGGAATGAACGTGTTTGGTAGGAGTATA
CGACCTCGGAGCTTGTCCTCCCTGCTGGGTGCCGTGTGCTTCCCCTCGAT
GGTCGAGTCGGAGTGAGTCCTCCCTGCAGCTAACCTAGCTCATTTCTCCC
CGTATTGTTTTATTTCCGCCATTTTTTGTTTTGGGGGCCCGGGAAAACAA
CAGTATCGCTCCTTTCCGCGCGGCAATCGAGTCCGGGGCGCTGGAGCTGC
CGGATGCGGACGATGACGGGGTGTTCGGTCGGTCGTGCAAGCTGTACTGG
GGCTGCCGCGACGAGGAGAGCATACCGTGGAAGGACCGGGTGAAGGCGTG
GGACAAGCAGGGCGTCGAGGTGGTGATCGTCCTCTCTGAGCCAAGTGAGT
TGAGAGCGGNNNNN back to topCoding sequence (CDS) from alignment at Scaffold_228:372775..377488- >EsuBft144_26a-0001 ID=EsuBft144_26a-0001|Name=EsuBft144_26a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1536bp|location=Sequence derived from alignment at Scaffold_228:372775..377488- (Ectocarpus subulatus male Bft15b)
ATGTTTCAACGTCGAGAATGCGCGATTACGCGCTCTCCCACCGTTTGTCT
CAACCGAAGCCTTTTTTCGCTCTCCCCTCCCGCTCACATTGAGCAGGGGG
TCCCACAAGGTTGCACGCTGTCCCCACCATTGTTCCAGGTGTTCATCAAC
GATCTATTGGAAGTCGTAGAGGCAGTTCGAAAGGGAGTAAAAGTAGGGGA
CACGGAAACTTCGGTTTCAGGAATACTGTTTGCGGATGATTTTGTCGGTA
TGTCGGACACCCCTGAGGGACTGCAACTGCAAATCGACGCGGCGAAGAAG
TTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCAT
GGTATGCAACGAGGACAAGGAGGACCCAGTAGAACATAGATGGAAGTGGG
AGATCGAGGAGATTGCAGTATTGGACCAGTACACATACCTGGGAGTAGAG
ATCACAAAAGACTGCTCGTGGAATGCACACATGTCCAACGTAGCGGAAAA
GGGCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACCGGCACC
TCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCG
CTAGAGTACGCAGGAGAAATATGTGAAGGAAATAAGAAGGTAGTGAAAGA
ACTCGAGGCGGCGCAGATGAAAGCAGCGAAAACCATCCTAGGATGCTCCA
GGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAATCCCTA
CGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCGG
GATGGGAGAGGAGAGGTTGCCGAGAATTGCATGGGAGGCAAAGTGGGCAA
ACAAAAAGAGGGGTAGACAACCCAAGGAATGGGTCATGGTTGTAGAGGAC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAGACTAG
GGAAGACATTTTTGAGCCACCTTTGGGAAGAGGGCCATTACGCGCTGACG
ATCGACGTCGGGGACATCGCCAAGGAGTACACGGTACCGGGCCAGTACGT
GCAGATCAAGGTGACCTCCAGCGATAAGCCGAGGTTCTTCGCGATCGCCT
CTCCCCCGGATGCCAGGGAGAACGACGCGACGGAGGCGCTGGTCGGGGTC
AAGGCCGGGGGCTCCGTGGAGGTTTCCCCCGTCATGGGCAAGGGGTTCCC
CATCACGGAGAACTTCACCGGATACAAGTACGACTTCCCCGTACAGAACG
TCGTGCTGTCGGCGTCGGGCACCGGTATCGCTCCTTTCCGCGCGGCAATC
GAGTCCGGGGCGCTGGAGCTGCCGGATGCGGACGATGACGGGGTGTTCGG
TCGGTCGTGCAAGCTGTACTGGGGCTGCCGCGACGAGGAGAGCATACCGT
GGAAGGACCGGGTGAAGGCGTGGGACAAGCAGGGCGTCGAGGTGGTGATC
GTCCTCTCTGAGCCAAGTGAGTTGAGAGCGGNNNNN back to top
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