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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Symbol | GT20 |
| Status | Manually annotated |
| Seed ortholog | 67593.Physo128418 |
| ProteomeId | EsuBft144_15 |
| Protein domains | IPR023214 |
| Protein domains | PTHR10788 |
| Protein domains | G3DSA |
| Protein domains | SSF53756 |
| Protein domains | IPR001830 |
| Protein domains | IPR003337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 10 |
| Max annot lvl | 4776|Peronosporales |
| Length | 121 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.27e-74 |
| EggNOG OGs | COG1877@1|root,KOG1050@2759|Eukaryota,3QCMS@4776|Peronosporales |
| Date last modified | 2016-09-01 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00005,RC00017,RC00049,RC02748 |
| KEGG ko | ko:K16055 |
| KEGG Reaction | R02737,R02778 |
| KEGG Pathway | ko00500,ko01100,map00500,map01100 |
| EC | 2.4.1.15,3.1.3.12 |
| Description | Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase, fragment |
| Description | Trehalose-phosphatase |
| COG category | G |
| CAZy | GT20 |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
| Note | Bifunctional enzyme comprising a N-terminal trehalose 6-phosphate synthase (TPS) and a C-terminal trehalose 6-phosphate phosphatase. The TPS module belongs to family GT20 of the glycosyltransferases. Catalyzes the subsequent reactions: UDP-glucose D-glucose 6-phosphate = UDP alpha,alpha-trehalose 6-phosphate and Trehalose 6-phosphate H2O = trehalose phosphate. |
| Note | Herve C., annotator |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003824 |
| GO | 0016020 |
| GO | 0043231 |
| EC | 3.1.3.12 |
| GO | 0010033 |
| GO | 0005992 |
| GO | 1901700 |
| PMID | 11701378 |
| EC | 2.4.1.15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_15a-0001 ID=EsuBft144_15a-0001|Name=EsuBft144_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1212bp|location=Sequence derived from alignment at Scaffold_228:477683..483228- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCTGTTTTGTTGCTGTGGATGAGGCAGCTAGTGCTGACTGCTGCAC
GATTGCTGCTGCTGGTGTTGCCGTCGCGGACGCTTTTGGTGTGCAACCGC
TCGCCGCCGCTACTGCTGCTCAGGAGCTGAGCGCGCTGTACGCCATCGCC
GACGTGCTGGTCATAACCCCCATCCGCGACGGCATGGACGTGGTGCCGTT
CGAGTACGTGGTCTCCCGGGAGTGCCGACGCCTGCCCGCCACCGTCGTGC
TCAGCGAGTTCGCCGGCTGCGCCAGGTCCATCGGCGGTGCTGTTTTGATC
AACCCCTGGAACACCACCGAGTTCGCCGAGAAGATGATCGGCGCCATCAA
CATGGAGGAGAACGAGCGAGAGATCAGGCAAGCCGGCTGTTGGTCTGATT
TTGGCGGTGGCGGTGGTGGTGGTCGGCAGCTCCACGACGCCAACGAGGGC
TGGGTGCGGACCACCGCGCGTCTCCTCCAGAAGGAGCATGTCGTCATGTC
GTTCATGTACAGCCGTTGGCGCCTGGTGGCGTTCAACCTTGAGGGTGTTC
TGGCGAGGGCCTGCGCCTTGCCGGAGCTGGTGCATATCCCGGCGGAGACG
GCGGCGTCGTTGGACTCCCTATCGAGGGAGCCCAAGAACATGGTCGTGGT
GAAGAGCCCTCGGAGCCGAGACACGCTGGATCGCCTGCTGGGCCGCACGA
ACTGCGTGCTCGCTGCCGAGCACGGAGCCTTCATCCGATGGGGGAAGCAC
GCTCATTGGCAGCCGCTGCTTCCTAACGTGGATATGAGCTGGATAGGGGA
TATCGAGCCCCTGCTGGAGTACTACACGGAACGCACACCCGGGGCCGTGA
TCGAGAGCCGGGAGGTGAGCATGGCGTGGCACTACCGGGACTGCGATCTC
GGGCACGGGGCATGGCAGGCCAAGCAGCTACATGTCTCTCTCCTGCAGCT
GTCCAAGCGCCTGCCCATCAGCGTCTACGCGGGAGACAAGGTGCTGGAGA
TCATCCCACAGGAGATGAACGTGCAGGTTTCCCACTTCCTGGAGATTGTG
GTTACCCGATTCCGCAGGCTGCTCAAGTCCAAGCCGCCCGAAGACAGCCT
CCAGTTGCACGGACAAAGTTTCGAGGACGAGGAGGGCCACGGCGAGTGTT
TCTCTAGCGTCATCGCCGGCGTCGACATCGGAGACGCAGACGGCTACTAT
AGCGAGCGTTAG back to topprotein sequence of EsuBft144_15a-0001 >EsuBft144_15 ID=EsuBft144_15|Name=EsuBft144_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=403bp
MFCFVAVDEAASADCCTIAAAGVAVADAFGVQPLAAATAAQELSALYAIA
DVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLI
NPWNTTEFAEKMIGAINMEENEREIRQAGCWSDFGGGGGGGRQLHDANEG
WVRTTARLLQKEHVVMSFMYSRWRLVAFNLEGVLARACALPELVHIPAET
AASLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKH
AHWQPLLPNVDMSWIGDIEPLLEYYTERTPGAVIESREVSMAWHYRDCDL
GHGAWQAKQLHVSLLQLSKRLPISVYAGDKVLEIIPQEMNVQVSHFLEIV
VTRFRRLLKSKPPEDSLQLHGQSFEDEEGHGECFSSVIAGVDIGDADGYY
SER back to topmRNA from alignment at Scaffold_228:477683..483228- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_15a-0001 ID=EsuBft144_15a-0001|Name=EsuBft144_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5546bp|location=Sequence derived from alignment at Scaffold_228:477683..483228- (Ectocarpus subulatus male Bft15b)
ATGTTCTGTTTTGTTGCTGTGGATGAGGCAGCTAGTGCTGACTGCTGCAC
GATTGCTGCTGCTGGTGTTGCCGTCGCGGACGCTTTTGGTGTGCAACCGC
TCGCCGCCGCTACTGCTGCTCAGGAGCTGAGCGCGCTGTACGCCATCGCC
GACGTGCTGGTCATAACCCCCATCCGCGACGGCATGGACGTGGTGCCGTT
CGAGTACGTGGTCTCCCGGGAGTGCCGACGCCTGCCCGCCACCGTCGTGC
TCAGCGAGTTCGCCGGCTGCGCCAGGTGAGACGAAGAGGAGAGAGCTAGA
TCGAAAGAGAAAATGCAGACAGAGAGCGGGCCCTAGGGGGCCCTAGAGAG
GGAGAGACAGAGAGAGACAGAGAGAGACAGAGAGACAGAGACAGAGACAG
AGACAGAGACAGAGACAGAGACAGAACGTCAGAGGACGAGGGGAGGGAGG
ACGGCAGAGGAGTCTCATGTGCGATTTTCTTGCCATGCTGCCGTACAGTA
CAGCTGTACTGCCACTTGAGGCTGGCGTTTTGCTCTGGTTGTCAAGTTGA
TACCTCTTACAGAGACGAGTCCGCCGCCGCCGTGCCTATGTATGCCCCTT
ATTCTTGCCATGGTGCCCGTCACCATCCCGCCCTGTTGGGTGTTTTTGGA
AGGTCCATCGGCGGTGCTGTTTTGATCAACCCCTGGAACACCACCGAGTT
CGCCGAGAAGATGATCGGCGCCATCAACATGGAGGAGAACGAGCGAGAGA
TCAGGCAAGCCGGCTGTTGGTCTGATTTTGGCGGTGGCGGTGGTGGTGGT
CGGGTGATATCTCGGTGGTTGGTTCCGTTTTTGCTCCGGAAGCGCGTTGT
CAACACATGCATGCTTCGTCCTCCAACCACGACATGCAACAACGCGCACG
TTTCCCCCGCGTGTAGTAATAGCAGAGGGATAGAACGGACGCTTTTCTCA
CCGGAGAGCCGGGTAGCACGGTCGATGCGTATGAAAACTATCAAACCCAA
AGGGCATCCACGAAGCCGTTAAGCCGTCTCAAATATAAAAAATAAAGTAG
AAAAGCCCGTTCCCTACCCCCATACCCTCCCGGTCGACGGCACGCGCGCT
CCCCAGACATCGAAACATGAGCTCGTACGTGAACAACTTCACGGCGACCC
TGTGGTGCAAGCGTTTCGTGCAGCAGCTCCACGACGCCAACGAGGGCTGG
GTGCGGACCACCGCGCGTCTCCTCCAGAAGGAGCATGTCGTCATGGTGAG
TCCTTTTCTTTGGTAGTATTGGCATCGACCGAACTAGCCGGCGGACCAAT
CAAAAATACGTCAGTCTCAGTGCTGTGGAAAACATGTGTGTGTTTGTGTG
TGAGAGAGAAAGAGAGAGATGCCGCCCGCTCCAATTGCAGCATTGACATT
CATCGAGGGAGGGCAAAACGGTGGCACATCTTTTGTCAGTCGGTCAGTCA
GTCGTTTGTCAAGTCATTCATTCGTTCATTCGCAACCTTCTTGGTGTCGG
TCTCCAATCACTGCCACACTCGTGAGCACGTGCACGCAGGGCAGGCGCGC
ACAAGCTCTCACCAACTCACTCCCGCCCCACCACTCTCCCCAACATTCGT
CATCCGCCACCTCCCTTTCTGTTTCCCGGTGGCAGTCGTTCATGTACAGC
CGTTGGCGCCTGGTGGCGTTCAACCTTGAGGGTGTTCTGGCGAGGGCCTG
CGCCTTGCCGGAGCTGGTGCATATCCCGGCGGAGACGGCGGCGTCGTTGG
ACTCCCTATCGAGGGAGGTAAAAAAAATAGACGTGAAAAAAAAAAATGGG
AGAGACTCCCTATCGAGGGAGGTAAAAAAAGGCACGAAAAAAAATGGGAG
AGACTCCCTATCGAGGGAGGTGAAAAAAAAAGACGTGAAAAATAAATAAA
TGGGAGAGACTCCTTATCGAGGGAGGGATAACAAAACATGTGGGGAGAAC
ATCATGTTTTGGCGCAACACCTACTTCGTGGGAGACATTGCCGTTGCTGC
CACTGCTGCGGGTGTGGAGTGGAGAAACGCAAAAATAAATAAAAACGTGT
GCGCGTGTTGGTTTAGTAGCAGAGGTTGATGATGGACGACGGACTCCTCT
TGGTGTAGGTTTGGGTGCGGTCACGAGAAGGAAAACGTGGTGAAGCGGGA
CAGCAGATCCGACAATAGACAAGAATCCCCTCTGCGCGTTGACTTAAAAA
GTAAGTGAAAAACATACAGCGGTGGGGAGCACAACTTTTTTTTTTTTTTT
CTCCCGTCGTTTAACGAAGCGATGCTCGAACCCGGGAGAGAGTGTTCGTT
CCCTTTCAATTAACCCCTTCGTGACGCAACTGCTCTTTAGAGGGTGAGGT
GCCGTTGGTTTCGCCGTCGTGCTTGGTTCTCTCTTCTTGCTAGTTGCCTC
GATCCCCCCTCTCCTTGATCTTTTGCCCTTCTCGGCTTTGTTGCTGTTGC
CGTTGTGTTGGCGGTATTGCTCTTACGTTGTTTCTTCCCTGCTTGCAGCC
CAAGAACATGGTCGTGGTGAAGAGCCCTCGGAGCCGAGACACGCTGGATC
GCCTGCTGGGCCGCACGAACTGCGTGCTCGCTGCCGAGCACGGAGCCTTC
ATCCGATGGGGGAAGCACGCTCATTGGCAGGTATGTAGTGCGGTAACAGC
CAGTATTGCTGTGCGCGATCAATGCTCGGGAGTATGTTGTCGTGTCTCGG
TCTAGCTCTTGTGGTGTGCTGCTGCCCCAATGATTGGTCAGGCAGGAGAA
CGTGGCATGTCTTGGTCGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGAT
GTTGTTGGTGATGTTTTTGGTGGTGCTGGTGGTGCTGGTGGTGCTGGCTT
CACGAAAAGGACGGCCAGACCTCTAGCGAGATGTCGTTAGTTGTAGTGTT
GTAGTTGTTGTTGTAGTTGTAGTAGTTGTTGTTGTTGTTGTTGTTGCTGG
TGATACTGGTATTTGTGCTGGCTGCACGAAAAGGGCGGGCAGACCTCTGG
CCAGTTATCGTTGTTGTTGTTGTTGTTGTTGTTGGTGTTGGTGGTGCTGA
GGTTGGTGCTGGCTTGCCAAAAGAAGGCGAGGCGCGTAGCCAATCGTCGT
TGTCGTTTTGATAGTTGTCCCCGCTGCCCCTGTTTCTGGTACCCTTGTTG
AACTGTTTTGTGTCTGACCGCACCCCTCGCGTACGTTTGTTTCCTGTTGG
TTGCTTCTGTGCCAGCCGCTGCTTCCTAACGTGGATATGAGCTGGATAGG
GGATATCGAGCCCCTGCTGGAGTACTACACGGAACGCACACCCGGGGCCG
TGATCGAGGTGAGATTCGGAAAAAACACTCAAATGTTTACGTATCGAAAG
GGTGAAACGGCGAGTTTGATGTCTCCGTTGTCTTTGTTGAGCACCCTTTC
CATACGTGGACATCCATTTCCGAGTTGGGTTTTTCTTGAGTATTATTGTC
TGTTTGTTGCAAGAGACAAGGACAGCGAAAAGCCCTCATCGATTTTCGAG
TGAACAACTCCCGGTCATTGAGAAACGAGCGTCGACATGTTTTTCCCTCT
GCCCCGTTTCTCCATCCCACCGACTCGATCAGCCACGAGGCTCGCGACTG
CTCGTAGGCCAAACCGACATGTCGGCGATGGCGACGGACGGCTACACCGC
CGTAGGCGTCGCTCTTTTTTTTGTTCTTCTGGAAACCTCACAGAGGCACG
TTTCGCCCGGGCTTTTGTGATTCTGCCATTCGGGGTCTCACACCATCACG
CCCAGGCATAGCAGTGAGTACCCTCCTCCACCCCGCACGTTCAATGGCAT
GCCAAACATGAGCACACAGCCCCGTGCGCGCGTTCGCACCCCCCCCCCCC
CCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCCCCCCTTCTTTCGACAAATGTCCAACGACCTTAAAAAAATACCTT
GTGAATGAATCAGAGCCGGGAGGTGAGCATGGCGTGGCACTACCGGGACT
GCGATCTCGGGCACGGGGCATGGCAGGCCAAGCAGCTACATGTCTCTCTC
CTGCAGCTGTCCAAGCGCCTGCCCATCAGCGTCTACGCGGGAGACAAGGT
GGGGCAGGGGGTGGATCGAGCAGCAACGTGTACGTCGTCTATCTAGCATG
GCTAGAAGGGTGGTGGTGAGGTCCGAGGTTTTTTGGCTCGGGGACGTGGT
TGTTTGGGCCTTCAATGAAGAAGCGCTAGCGCTGTACTTCATGTTTTGTT
TCGGTATTTTCGCCGTGCCGACCAAGACTCACGCTGGCCGTTTTAGCAGC
GCTGATTCTGATTCACGGAGGCGAGCCTACGCCTGCGATCTGTTTCGGCC
TCCCTCTCTGCCTGTGTGTGTAGTGCCCACTTTTGCGGCTGCCTGTGGGC
CGTGTGGCCTATCTTTCTCTCTCTCTCTCTCTCTCCCTGACGTTCTCGCC
GGGCCGTGTGGCCTACCTTTCTCTCTCTCTCTACTCTCTCTCTGTCACTC
TATGTCTCTGTCTCTCTCTGTCACTCTGTCTCTGTCTCTTTCCCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TGACATTCTTGCGGAGCAAAGGTGCTGGAGATCATCCCACAGGAGATGAA
CGTGCAGGTTTCCCACTTCCTGGAGATTGTGGTTACCCGATTCCGCAGGC
TGCTCAAGTCCAAGCCGCCCGAAGACAGCCTCCAGTTGCACGGACAAAGT
TTCGAGGTCTGCGTGTGTGGGCGTGTTTTTTTAACTAACGAGATTACTAA
GGAAGTAATAAAATCAACGAGAATTGCGAGGTTCTGTACTGTTGCCAGTG
TTGTATCTGTCTCAGCTGGCTGGCGGCATCCAATATCTCTCTCGCGTTGA
ACCAGAGTACTTTGTGGCACATTGCTGGCTAGCTAGCGGCATCCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTNTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CCTCGTGTTGTTGAACCACAGTGCTTGCTTGCTTGCTTTGTGCTTTCAAC
CTTGCTTGCTTGTTGCGTTTCTTTCGTGGTACATCCCATCCCATCCCATC
CCACTCCATCTCATCCCATCCCATCTCATCTTGTCCAATCACAGCAGGAC
GAGGAGGGCCACGGCGAGTGTTTCTCTAGCGTCATCGCCGGCGTCGACAT
CGGAGACGCAGACGGCTACTATAGCGAGGTGAGTGACTTGACTCCCCCGA
AACCACCAGACCATCATCAGCGCCGAACACAACATCACAGCGTTAG back to topCoding sequence (CDS) from alignment at Scaffold_228:477683..483228- >EsuBft144_15a-0001 ID=EsuBft144_15a-0001|Name=EsuBft144_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1212bp|location=Sequence derived from alignment at Scaffold_228:477683..483228- (Ectocarpus subulatus male Bft15b)
ATGTTCTGTTTTGTTGCTGTGGATGAGGCAGCTAGTGCTGACTGCTGCAC
GATTGCTGCTGCTGGTGTTGCCGTCGCGGACGCTTTTGGTGTGCAACCGC
TCGCCGCCGCTACTGCTGCTCAGGAGCTGAGCGCGCTGTACGCCATCGCC
GACGTGCTGGTCATAACCCCCATCCGCGACGGCATGGACGTGGTGCCGTT
CGAGTACGTGGTCTCCCGGGAGTGCCGACGCCTGCCCGCCACCGTCGTGC
TCAGCGAGTTCGCCGGCTGCGCCAGGTCCATCGGCGGTGCTGTTTTGATC
AACCCCTGGAACACCACCGAGTTCGCCGAGAAGATGATCGGCGCCATCAA
CATGGAGGAGAACGAGCGAGAGATCAGGCAAGCCGGCTGTTGGTCTGATT
TTGGCGGTGGCGGTGGTGGTGGTCGGCAGCTCCACGACGCCAACGAGGGC
TGGGTGCGGACCACCGCGCGTCTCCTCCAGAAGGAGCATGTCGTCATGTC
GTTCATGTACAGCCGTTGGCGCCTGGTGGCGTTCAACCTTGAGGGTGTTC
TGGCGAGGGCCTGCGCCTTGCCGGAGCTGGTGCATATCCCGGCGGAGACG
GCGGCGTCGTTGGACTCCCTATCGAGGGAGCCCAAGAACATGGTCGTGGT
GAAGAGCCCTCGGAGCCGAGACACGCTGGATCGCCTGCTGGGCCGCACGA
ACTGCGTGCTCGCTGCCGAGCACGGAGCCTTCATCCGATGGGGGAAGCAC
GCTCATTGGCAGCCGCTGCTTCCTAACGTGGATATGAGCTGGATAGGGGA
TATCGAGCCCCTGCTGGAGTACTACACGGAACGCACACCCGGGGCCGTGA
TCGAGAGCCGGGAGGTGAGCATGGCGTGGCACTACCGGGACTGCGATCTC
GGGCACGGGGCATGGCAGGCCAAGCAGCTACATGTCTCTCTCCTGCAGCT
GTCCAAGCGCCTGCCCATCAGCGTCTACGCGGGAGACAAGGTGCTGGAGA
TCATCCCACAGGAGATGAACGTGCAGGTTTCCCACTTCCTGGAGATTGTG
GTTACCCGATTCCGCAGGCTGCTCAAGTCCAAGCCGCCCGAAGACAGCCT
CCAGTTGCACGGACAAAGTTTCGAGGACGAGGAGGGCCACGGCGAGTGTT
TCTCTAGCGTCATCGCCGGCGTCGACATCGGAGACGCAGACGGCTACTAT
AGCGAGCGTTAG back to top
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