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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Symbol | GT20 |
| Status | Manually annotated |
| Seed ortholog | 164328.Phyra80488 |
| ProteomeId | EsuBft144_13 |
| Protein domains | SSF53756 |
| Protein domains | PTHR10788 |
| Protein domains | IPR001830 |
| Protein domains | G3DSA |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 10 |
| Max annot lvl | 4776|Peronosporales |
| Length | 121 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.94e-109 |
| EggNOG OGs | COG1877@1|root,KOG1050@2759|Eukaryota,3QCMS@4776|Peronosporales |
| Date last modified | 2016-09-01 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00005,RC00017,RC00049,RC02748 |
| KEGG ko | ko:K16055 |
| KEGG Reaction | R02737,R02778 |
| KEGG Pathway | ko00500,ko01100,map00500,map01100 |
| EC | 2.4.1.15,3.1.3.12 |
| Description | Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase, fragment |
| Description | Trehalose-phosphatase |
| COG category | G |
| CAZy | GT20 |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
| Note | Bifunctional enzyme comprising a N-terminal trehalose 6-phosphate synthase (TPS) and a C-terminal trehalose 6-phosphate phosphatase. The TPS module belongs to family GT20 of the glycosyltransferases. Catalyzes the subsequent reactions: UDP-glucose D-glucose 6-phosphate = UDP alpha,alpha-trehalose 6-phosphate and Trehalose 6-phosphate H2O = trehalose phosphate. |
| Note | Herve C., annotator |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0009832 |
| GO | 0005737 |
| GO | 0003825 |
| GO | 0009793 |
| EC | 3.1.3.12 |
| GO | 0005992 |
| GO | 0051301 |
| PMID | 11701378 |
| GO | 0010182 |
| EC | 2.4.1.15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_13a-0001 ID=EsuBft144_13a-0001|Name=EsuBft144_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1215bp|location=Sequence derived from alignment at Scaffold_228:485611..491577- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTACAAGAAGCTTGCCAAGGTTAGGGACGAGCAGGACGCCGCCCGCCC
CGGGGGCCAAGACGGCGCGAACGGCGCCACGGGGCGGCCGCGGATAATCC
TCGTCTCCCGCAGGCTGCCGTACAAGCTTCAGATGACGCCATCTGGCCGG
TGGACGACGGAGATCCCGAAGGCGGACCAGGCGCTGCAGAGCTACAGGGT
GGTGCACGATTTGATGGAATGCATTTGGGTGGGGTGGCCCGGAACGTACG
TGGAGCCCGGTCGGGAATGCAGCCTGACGGACCAGCTCAAGGACCGACGC
CTTGTGCCGATATTTCTGGATGCCGCGATGGAGGACAGGTTCTACGAGGG
TTTCTGCAAGACCATCCTTTGGCCGCTCTTCCACTCGTCCATGCCCACGA
CGGAAGACACCATCGCCTGCCACGACGCCGACTCGATCGAGGAGCAGCGG
GAGGAGCGCCAGCTGTGGTTGGCTTACAAGGCGGCGAACCAGAGCTTTGC
GGACACGATCCAGGACGTCTACAGGGACGGCGACCTCATCTGGGTGCACG
ACTACCACCTCACCATGCTGCCGCAGATGCTGAGGAACGTGTTGCCCTCG
GCCAAAATCGGCTTCTTTTTGCACCTTCCCTTCCCCTCGTCCGAGATCTA
CCGCATTTTGCCGTATCGCGAACAAATCCTGGAGGGGATCCTCAGCTCCG
ACATCGTCGGGTTCCAGACGTACGACTACGCGAGGCACTTCCTGTCAACG
GTGGAGAGCCTGCTCGACGCTAACTGCTCCCCTCAGGGGGTGGAACACAA
CGGGCACTTCGCGAACGTGACGATCTGTCCGGTTGGCATCGACCCGGATG
CGGTGACGCAGCTGTGCCACCAGCCGGACGTGATGAGGCTCATGCAGCGG
TGGTCCAAGCAGACCAGGAACAAGTCGATGCTTCTCGGAGTGGACAGCCT
GGACGCTACCCGGGGTCTTGTGCAGAAGTTTCTCGCCGTGGAGGAGATGT
TCGAGATGCAGCCGGGCCTCGCAGACAAGGTCAACTTCGTGCAGGTTTGC
TTCACGGGGCCGCACTCCCGAGAGCACATGTTGCTGGAGGCGCAGGTGCA
GGGCTTCGTGGCAAGGGTCAACTCCAAGCTGGGGAGTATCGACGAGGTCG
GGCCGGTGCAGTTCTTCCTGAACGTCAACCCCGAGTTGAAAGCACTGTGT
AACTGCCTCGAGNNN back to topprotein sequence of EsuBft144_13a-0001 >EsuBft144_13 ID=EsuBft144_13|Name=EsuBft144_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=405bp
MYKKLAKVRDEQDAARPGGQDGANGATGRPRIILVSRRLPYKLQMTPSGR
WTTEIPKADQALQSYRVVHDLMECIWVGWPGTYVEPGRECSLTDQLKDRR
LVPIFLDAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQR
EERQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPS
AKIGFFLHLPFPSSEIYRILPYREQILEGILSSDIVGFQTYDYARHFLST
VESLLDANCSPQGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQR
WSKQTRNKSMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVC
FTGPHSREHMLLEAQVQGFVARVNSKLGSIDEVGPVQFFLNVNPELKALC
NCLEX back to topmRNA from alignment at Scaffold_228:485611..491577- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_13a-0001 ID=EsuBft144_13a-0001|Name=EsuBft144_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5967bp|location=Sequence derived from alignment at Scaffold_228:485611..491577- (Ectocarpus subulatus male Bft15b)
ATGTACAAGAAGCTTGCCAAGGTTAGGGACGAGCAGGACGCCGCCCGCCC
CGGGGGCCAAGACGGCGCGAACGGCGCCACGGGGCGGCCGCGGATAATCC
TCGTCTCCCGCAGGCTGCCGTACAAGCTTCAGGTATGGCCCCCAGTCTTG
TTCGCATCGCGGCCGTTGGGTCGTTCGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTTTTGCCGTTTTGGGAGGCGGGTTC
GTTTTCTGCCGGGTGTGCTTTTTTGCCGTATTTGCTTGTGAGTGTGTTTG
GTCTTGTGCAGGTATGAATAGGAGGGCGATGTGGAGTTGTGACCCCCTTT
GATCATGGCCATCTGCAGATGTTTGCGAGTTGTACATGTGATGCCTCCGG
AGTCTGCTCATGAGAGCACAGAGTGTCTTGAAAGGGTGACGCAAAAATGA
AAAATGAATGCAGGCACAACAGGACCAGCCCACAGCTGGCTGCCAACTGC
TGCCCTTGCCCAAGCTAAGCAGCTCGCACATCTGGCGTGTATTGACTCGA
AAGAGCACAGCAAACCTCCACGAACCAAAAAGAAAGCTTAACATGAGGTT
TACAAATTCTGCGTGCATTGTTCTTATTGTTTTGGGGGCTTCGAATTTTT
TGTTTTGTTTTTCACTGCCTCTTCCTTGTTGTGTTTGGGGTCTTTTTTTT
GCACGGGATAGTGTTTGTAACGCGACACCAAAATGGGTGACGGATTTCAG
AGCTTTTTTTTTTTTATTGGTGATGGTGGTCGTGGTGGTCGTGGATCATG
TGCGTAGAGTTTGGCGCAAAGTGCTCCATCGCCAACAATTTCGGGCACGT
ACACAACCACAAATCAGCGTTTCCTCTACAACTATGCAGAGTAAGTTATC
TGTGATTCGCGTCTTTTTTTTTTTTTGCCGACCTCCGAACCTTTTCGAAA
CCTTGTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTGTTTTGGCGGAAAAT
GCACAAGATGACGCCATCTGGCCGGTGGACGACGGAGATCCCGAAGGCGG
ACCAGGCGCTGCAGAGCTACAGGGTGGTGCACGATTTGGTGAGTAGTTGG
TGTTGCAGCAGTGACTACAGAGTAAGGCAGTGCATCTTCCGCTACAGGGT
GGCGCACTGCGTGGTTTGGTGAGTAGTGGGCACGGACGGCGGAGAAAAGC
AACCTCTTGTTTTCCGATGACCGGCCGCTTCTGTGGCTACTCCGAGGATT
ACACTGAGTGCTATCGGGGGAACATTATTTTTCTTCCGTCACAGGTTGGT
CCACGATTTGGGGAGGACTGGGTGCTGACTGGCAGTGGACGAGAAAAAGC
AACCTCGTCTTCAAGTTGCCGGCCGCTGCTCTGACTACGACAGCCGTTGT
TGTCGCTTATTGTCGAAGCTATTTCCGCTCGCCAACACCGTCTTTCTTTT
CCGGGAGTAACAGTACTTCGTAGGAACAATGGCTGTGCAGCCTCGTCTCG
TAAATGGGACGAAGGTGATATACATGAACAAGTACAGTCCCCGTCCCCTA
TCCCGTCCCTCCTTTAACGTCCTTCCCAGATGGAATGCATTTGGGTGGGG
TGGCCCGGAACGTACGTGGAGCCCGGTCGGGAATGCAGCCTGACGGACCA
GCTCAAGGACCGACGCCTTGTGCCGATATTTCTGGTGAGGACGGCAAACA
ACCAAAAGCAAGCGATGTATTCACGAAGCATCCAATTACAAAAGCGAGGA
GAGGACTCGACAAAGAGCGTTTCGTTGTGCTTTCAAGAGTCTTGTCTTGT
TTGGTTCTTTGTTTTCATTTGCTCACCAGTGCGTTGAGCAGCTTTGTCGA
CCACAATATGGATAGTCTACATTTCTTGAAAAGTGTATGAGACCAAGAGC
CAGAGAGGCACGTTGGTGTGTTTGCGTGCGCCATAAGAGGCACTCAACTC
CCCAGTGTGCTTTTGGCTCTTGAGGCGGGGAGTCTGCGGGGGTGCGTGTC
GCTTGTGACGAAAAGGTGCGACCGACACCCAACCTTTTCTTTTCCTAACG
GCCGCTACGTGCGTTTATTTGCAGTGGTTTTCGTGGCTCACTTTTTGTCC
CATCATTTTCGCGGTCTTATTTAAAGTCTGCGCAGGTCATACCAACCAAT
GCAAGCACCGCGACAAGTTTCAATAGCTAGACCCATCGATCATCACACAC
ACGGGATCACGCAACCCGAACCGGACGTTTTTTTTTTCCTACATCCTACT
CGCGAATAGGATGCCGCGATGGAGGACAGGTTCTACGAGGGTTTCTGCAA
GACCATCCTTTGGCCGCTCTTCCACTCGTCCATGCCCACGACGGAAGACA
CCATCGCCTGCCACGACGCCGACTCGATCGAGGAGCAGCGGGAGGAGCGC
CAGCTGTGGTTGGCTTACAAGGTTTGCGTGTTGCGGCGGTTTTTTGTCCT
TGGTGTTTCTTTGGTGGAAAAGTCCAAGGGATAAGGGAGGGCCTTCGGCG
TCGGTGGGCGAGTTCATGGGGAGCACGCACGCCGTCTGCGTGTTCCCCTT
CTGGGATACCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCTCTG
TCTCTCTCCTCTTCCTTTTGTTTTGTTGTCGTCTTTTTCGTCAGGCGGCA
AACGAGGGCTTAGCGAGATTCCAACTCCTCTGTGCCTTTATGCGTTCTTT
TTTTTTTGCGCCTTTCGTCAGGCGGCGAACCAGAGCTTTGCGGACACGAT
CCAGGACGTCTACAGGGACGGCGACCTCATCTGGGTGCACGACTACCACC
TCACCATGCTGCCGCAGATGCTGAGGAACGTGTTGCCCTCGGCCAAAATC
GGCTTCTTTTTGCACCTTCCCTTCCCCTCGTCCGAGGTGTAACGGTATTT
TGTTTCGTTTTTGCCTATTTTTATTGTTTTTTTTCGGGGAGGTTTTCTGT
TGAGTCTTGTCTGCTGTTCCTGAGTAGTTCGGTTCTACCCTCAGCGGTTA
GTATGGATTACATCTAGATCGTTGGACATGGTAAATACCCCGCACTGAAA
ACGGGGTATTCCCCTGGAGCAAAAGGGGGGGGGGGGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCCCCCCCGGCGCCCACTCCCTTCTCGTTTTTTTCCCCTGCGATGT
TTTTCGTTGCCATCAACACGACCCGACCCCATGGCTGTGAAAAGAATTCG
AACGGCCCAATGAGGTACATACCTCCTCGCCTTTAAACCCCGTCTGCCCC
ACTCCCCACCTCCGAATCATCGATGTCCTTTTCTTTTTTGTTGTGCCCCC
TTGCTTTCTTCACAACCCGACGGACGAAAGATCTACCGCATTTTGCCGTA
TCGCGAACAAATCCTGGAGGGGATCCTCAGCTCCGACATCGTCGGGTTCC
AGACGTACGACTACGCGAGGCACTTCCTGTCAACGGTGGAGAGCCTGCTC
GACGCTAACTGCTCCCCTCAGGTGGGCGCGCCACCGTCAGTTTTTTGTGC
GCATGTATGGTGTGTGTGTGTTTTTCGTGTACTGTACTACCGGCTGTGCG
CGGCCATTGCACGGTATACGACGCAAGATAACACACTGCCCGGATCGATT
TTACAGAGCTTGATTTCCAACAGCAGAAAGGGTCGCAGTGCCGAAAACGT
AGCCTTTCGTTTTTGCATCCTCTTCGTCGTGGAGTAATCGAGTTTGGAAA
ATCGGTCCGGGGGGTGTATTATCTTGTGTCGTATGCGGTATCTGTTCACT
CGATGTTGTCTCGGTGTGTGGGTCGCAGCCTTGTAGCTACAGCCGTACCT
CGCTGAAGGACACCAAAAGTACGGACACTCTCTCGGTTAAATCACACTTT
TTTTCCGAGCACGGTGGCTCGCAGAATGAACACTATATGGAGGGGTATCA
ACCTTATGGGCACTTCCTAGGCTTCAGGACACTTTTTTTTGTAAACAACA
CCTTAACCGAGGTTAGACTGTATGTACTCGATGTTGCAAGGTGCGTGTCC
TCGTGTGCTGATGTACTCAGCCATTGTATCATGCAAACTCGCATGTTGTG
TATGGCGAATTTTTTTCGTGTGCTGCTAGCTGTACGCAAGGGCAGCTGCA
TCTGTTTTTGTCGAAACGAGGCTGGTTGGAGCGGTCGGCTCGTTCTGTTT
GTTTTGTTTTTCGTCTCGCTTTGTTTTGCTGCTGCTTCTTCCTCTGCTGC
TTGTTGTGACGTTGTTGTTGTGACGTTGTTGTTGCTGCTATTGCTGTTGT
TGCTGCTACTGCTGTTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTG
CTATTGCTGTTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGGT
ACAAGGGGGTGGAACACAACGGGCACTTCGCGAACGTGACGATCTGTCCG
GTTGGCATCGACCCGGATGCGGTGACGCAGCTGTGCCACCAGCCGGACGT
GATGAGGCTCATGCAGCGGTGGTCCAAGCAGACCAGGGTGAGGCTCATGA
GAGGTAGAAAAGGGAGAGGGAGAAACAGATAGACAGACGGACGGACGGAC
GGACAGACAGACGGGGAGAGGTAGAAGGGGGGGAGAGGAAGCAACGAAGG
GATTGATTTCCCACACAGAAGCGAACGGCCTTTCAGGCCGGTAGCAATTT
TCAAAGGTTGGGGGGGGGTGGACTAGATCGAAAGTGCTGTGCTTTTATTC
CGCAAGCTATCGTGCGACTGCTGCCTTCAAGTGTATTTTCTCTTCGTTCT
CGCACATTTCGTGCCTGTTTTTTTTTTTGTCTTTTTTGTCCTCGGGCGTG
TTTTTTTTTTTTTCATTCTCCTGCCATATGCATATCAGCGTTTGCATTTT
TGTCGCTGTTTTTGTGATGCTTGTTTTTTTTGGGTTGCGCGACCCTCTTC
TTTTTTTTTTTGCTCATGCATGATTTCTTTTTGTGTGTTGTTTTCATGCA
TATCATTCAGAACAAGTCGATGCTTCTCGGAGTGGACAGCCTGGACGCTA
CCCGGGGTCTTGTGCAGAAGTTTCTCGCCGTGGAGGAGATGTTCGAGATG
CAGCCGGGCCTCGCAGACAAGGTCAACTTCGTGCAGGTGCGACCGCCGCG
CCGATCCGACCACCACTGGTTGTCTGGTGTTAATATCTACTTTTCAAGTG
AAATAAAGGAATAGTTGGGAGGGAGGGGTGATATTGGGATATGGAGTGCG
TGATTATGCTACTTTCGTGTAACAGTCTATCGGGCGATGTAACGCAACTT
TAAGTATGTGGGAGGACGAGTGGACGGTCTCTTTGTGTGTTTTTTTAGCC
TGTGGACGAAATTCAAAATATATGAACACCGTAGTTGGGAGGATTGACAA
TGTGTGGCACAAAGTACTGGTACAATATTACAGCTGGGAGAATTTATTTG
CCTGACGACTGGCAGGTTTGCTTCACGGGGCCGCACTCCCGAGAGCACAT
GTTGCTGGAGGCGCAGGTGCAGGGCTTCGTGGCAAGGGTCAACTCCAAGC
TGGGGAGTATCGACGAGGTCGGGCCGGTGCAGTTCTTCCTGAACGTCAAC
CCCGAGGTAAGAGGGTTGGGGGGGTGTACTCATAGTCGTGCATGCCGTAG
TCGTTAAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGC
CGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTG
AGATATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTGT
TCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTTCGTATGAC
GTAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGAAAGCACTGT
GTAACTGCCTCGAGNNN back to topCoding sequence (CDS) from alignment at Scaffold_228:485611..491577- >EsuBft144_13a-0001 ID=EsuBft144_13a-0001|Name=EsuBft144_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1215bp|location=Sequence derived from alignment at Scaffold_228:485611..491577- (Ectocarpus subulatus male Bft15b)
ATGTACAAGAAGCTTGCCAAGGTTAGGGACGAGCAGGACGCCGCCCGCCC
CGGGGGCCAAGACGGCGCGAACGGCGCCACGGGGCGGCCGCGGATAATCC
TCGTCTCCCGCAGGCTGCCGTACAAGCTTCAGATGACGCCATCTGGCCGG
TGGACGACGGAGATCCCGAAGGCGGACCAGGCGCTGCAGAGCTACAGGGT
GGTGCACGATTTGATGGAATGCATTTGGGTGGGGTGGCCCGGAACGTACG
TGGAGCCCGGTCGGGAATGCAGCCTGACGGACCAGCTCAAGGACCGACGC
CTTGTGCCGATATTTCTGGATGCCGCGATGGAGGACAGGTTCTACGAGGG
TTTCTGCAAGACCATCCTTTGGCCGCTCTTCCACTCGTCCATGCCCACGA
CGGAAGACACCATCGCCTGCCACGACGCCGACTCGATCGAGGAGCAGCGG
GAGGAGCGCCAGCTGTGGTTGGCTTACAAGGCGGCGAACCAGAGCTTTGC
GGACACGATCCAGGACGTCTACAGGGACGGCGACCTCATCTGGGTGCACG
ACTACCACCTCACCATGCTGCCGCAGATGCTGAGGAACGTGTTGCCCTCG
GCCAAAATCGGCTTCTTTTTGCACCTTCCCTTCCCCTCGTCCGAGATCTA
CCGCATTTTGCCGTATCGCGAACAAATCCTGGAGGGGATCCTCAGCTCCG
ACATCGTCGGGTTCCAGACGTACGACTACGCGAGGCACTTCCTGTCAACG
GTGGAGAGCCTGCTCGACGCTAACTGCTCCCCTCAGGGGGTGGAACACAA
CGGGCACTTCGCGAACGTGACGATCTGTCCGGTTGGCATCGACCCGGATG
CGGTGACGCAGCTGTGCCACCAGCCGGACGTGATGAGGCTCATGCAGCGG
TGGTCCAAGCAGACCAGGAACAAGTCGATGCTTCTCGGAGTGGACAGCCT
GGACGCTACCCGGGGTCTTGTGCAGAAGTTTCTCGCCGTGGAGGAGATGT
TCGAGATGCAGCCGGGCCTCGCAGACAAGGTCAACTTCGTGCAGGTTTGC
TTCACGGGGCCGCACTCCCGAGAGCACATGTTGCTGGAGGCGCAGGTGCA
GGGCTTCGTGGCAAGGGTCAACTCCAAGCTGGGGAGTATCGACGAGGTCG
GGCCGGTGCAGTTCTTCCTGAACGTCAACCCCGAGTTGAAAGCACTGTGT
AACTGCCTCGAGNNN back to top
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