Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft144_11 |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 165 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_11a-0001 ID=EsuBft144_11a-0001|Name=EsuBft144_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1655bp|location=Sequence derived from alignment at Scaffold_228:505560..507413+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGTTGGACTACCTCGTACCTCTGGGGGGAGATTTTTCAGTGTGGGAA
CGCGTACCTCCAAGATCCGATCGTGTTTACGCGATTTATCGACTCTCTAC
CGTCCGAATATGAGGTATCGAAGGAGACGCTGGCATCCACCATAGACCTC
ATAAGGGACACCCTCATCCGGGTGGTGGTTACCCGGTTCCGCACCATCAG
CAAGAAAGCGGCGCGGGCGAAAGCGCCAAAGGCAGTAAAACAGGCCTTCC
TCGCTAGGGACGGCGGGGGGGGGCAACGGGGCGGCCGTAGCAACGGGCGG
AACAAGAGAGGAAAAGGCGGTGGCACCGGCGAGAACAATAGCAAATCGAA
CGGCGACGCCCCTGACCATCAGCGGTGCTTCAGGGACAACCAGAAGGGAC
ACTACAAATGGGACTGGGACACGGAGGAGTCCAAGTTCATCCCGAGGTGC
GAAAAATGCTCGGGGTTCGGCCACACCAAGGAAAAGTGCCCGTCTGTTGA
TGAAGTGGCGACGCTGGCGATCCAACTGCCTGAGCGGTGCAGCAGCCTGG
AGTAAATGCTGGATGTCGAGTGCGAGGCGCTCTGAGAAAAGGAAAGGGGG
GTCGAGGGGGTGAAAGAGAGCACGGGGCCACGGCGGATACTACTTTCTGG
TTGAGATTCGTGAGTGATGTTGAATGATTTTGATTGTGACGAATGATACC
GAAGGTTTCTACAGGGGATTCACGGTTAAGGCGTTTCCATTTTCTGATTT
GGCCTTCGTAGAGTGATGGTAGTTTCACTTACGATCATGCAATCAATGAT
GTTTTGTCGAAAGGGGATTAGCGGTTCAGGCATTTCCATTCCTGAGTGTG
GGTGTCCTGTTGAGCAATTGTAGTTCGTCTTATTCGAAAGTAAAGTCCAG
GCGTGTTATCGTGGGTGTTTCGCACGTCAATCGTAATTCGGCTCCAAAAA
CCAGCCATTCTATGATGGGGATTCGCGGTACGGGCGCTTCCATTTCGTGC
TGTTCGCGGGCGATGAAAACTTTGTCCGGGGCAGAATAAACGGGGAATGC
GGGGCCAAGCGTATCAAATGAGGGGGTGCAGCACAGGCGCTCCCCGCGGC
CGATGAAAACTCACGCACAGATGTACACAGGACCCGGTGTATCAAAAGTT
GCAGACACCGGCGCAGGTAGGTGTGGATCCGTGTACCAGACGTATCACCT
TGTGTGCGTGAGGTGGAAATGGGGAGGGGAGGACACCGTTCATGGTGACA
TTCCCGTTGTTGCTGCAGGAACCACTGTGTATGGCTTGTAGGAGGAAAGG
AAGCCTCAGCAATGATAAATTCTCGATGCAGTAGACAGTCATGCGTGTTT
TTCCGCGAGCGTTGAATGAGAGGGGTATGGTGTGAGCGCACCACTCGCTA
CAAAGCGAGGGAGGTTATCGCACGACATGATGGCCCGCAGTGTTCTTCGA
GTGAGGGAGAGCAGCCATATCGACGCGTGCTGCATAGTGGTTGATGAGAA
TTGGAACTTTGTTTTCTCTGAGGTCGTTGAGAATTGGAACTTTTTTTTTC
TGAGAGTTGAAGAGTTGTGCGTAAGCAGGCTGAAGTTTGACTTTGAGAGT
CGGAGTACGAGTTGAATGCAAGGAGGCTTATCATGCTTGATGCGTTTGGC
AAAAC back to topprotein sequence of EsuBft144_11a-0001 >EsuBft144_11 ID=EsuBft144_11|Name=EsuBft144_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=184bp
MSWTTSYLWGEIFQCGNAYLQDPIVFTRFIDSLPSEYEVSKETLASTIDL
IRDTLIRVVVTRFRTISKKAARAKAPKAVKQAFLARDGGGGQRGGRSNGR
NKRGKGGGTGENNSKSNGDAPDHQRCFRDNQKGHYKWDWDTEESKFIPRC
EKCSGFGHTKEKCPSVDEVATLAIQLPERCSSLE back to topmRNA from alignment at Scaffold_228:505560..507413+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_11a-0001 ID=EsuBft144_11a-0001|Name=EsuBft144_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1854bp|location=Sequence derived from alignment at Scaffold_228:505560..507413+ (Ectocarpus subulatus male Bft15b)
ATGAGTTGGACTACCTCGTACCTCTGGGGGGAGATTTTTCAGTGTGGGAA
CGCGTACCTCCAAGATCCGATCGTGTTTACGCGATTTATCGACTCTCTAC
CGTCCGAATATGAGGTATCGAAGGAGACGCTGGCATCCACCATAGACCTC
ATAAGGGACACCCTCATCCGGGTGGTGGTTACCCGGTTCCGCACCATCAG
CAAGAAAGCGGCGCGGGCGAAAGCGCCAAAGGCAGTAAAACAGGCCTTCC
TCGCTAGGGACGGCGGGGGGGGGCAACGGGGCGGCCGTAGCAACGGGCGG
AACAAGAGAGGAAAAGGCGGTGGCACCGGCGAGAACAATAGCAAATCGAA
CGGCGACGCCCCTGACCATCAGCGGTGCTTCAGGGACAACCAGAAGGGAC
ACTACAAATGGGACTGGGACACGGAGGAGTCCAAGTTCATCCCGAGGTGC
GAAAAATGCTCGGGGTTCGGCCACACCAAGGAAAAGTGCCCGTCTGTTGA
TGAAGTGGCGACGCTGGCGATCCAACTGCCTGAGCGGTGCAGCAGCCTGG
AGTAAATGCTGGATGTCGAGTGCGAGGCGCTCTGAGAAAAGGAAAGGGGG
GTCGAGGGGGTGAAAGAGAGCACGGGGCCACGGCGGATACTACTTTCTGG
TTGAGATTCGTGAGTGATGTTGAATGATTTTGATTGTGACGAATGATACC
GAAGGTTTCTACAGGGGATTCACGGTTAAGGCGTTTCCATTTTCTGATTT
GGCCTTCGTAGAGTGATGGTAGTTTCACTTACGATCATGCAATCAATGAT
GTTTTGTCGAAAGGGGATTAGCGGTTCAGGCATTTCCATTCCTGAGTGTG
GGTGTCCTGTTGAGCAATTGTAGTTCGTCTTATTCGAAAGTAAAGTCCAG
GCGTGTTATCGTGGGTGTTTCGCACGTCAATCGTAATTCGGCTCCAAAAA
CCAGCCATTCTATGATGGGGATTCGCGGTACGGGCGCTTCCATTTCGTGC
TGTTCGCGGGCGATGAAAACTTTGTCCGGGGCAGAATAAACGGGGAATGC
GGGGCCAAGCGTATCAAATGAGGGGGTGCAGCACAGGCGCTCCCCGCGGC
CGATGAAAACTCACGCACAGATGTACACAGGACCCGGTGTATCAAAAGTT
GCAGACACCGGCGCAGGTAAAATTGTGCTGGTGTCAACATGAGGTGGAAA
TGGGGAGGGGAGGACACCATTGATGGTGACATTCCCGTTGTTGCTGCAGG
TAGGTGTGGATCCGTGTACCAGACGTATCACCTTGTGTGCGTGAGGTGGA
AATGGGGAGGGGAGGACACCGTTCATGGTGACATTCCCGTTGTTGCTGCA
GGTAGGTGTGGACCCATGTACCAGACGTATCCACCTTGTTGAGGGGTTCG
CAGTGGCAAGGCCTCCCTACAACCTGTATCAGTGTTTGTCTTGTGAAGGG
GAGAAGCCCCATGATAGGAACCACTGTGTATGGCTTGTAGGAGGAAAGGA
AGCCTCAGCAATGATAAATTCTCGATGCAGTAGACAGTCATGCGTGTTTT
TCCGCGAGCGTTGAATGAGAGGGGTATGGTGTGAGCGCACCACTCGCTAC
AAAGCGAGGGAGGTTATCGCACGACATGATGGCCCGCAGTGTTCTTCGAG
TGAGGGAGAGCAGCCATATCGACGCGTGCTGCATAGTGGTTGATGAGAAT
TGGAACTTTGTTTTCTCTGAGGTCGTTGAGAATTGGAACTTTTTTTTTCT
GAGAGTTGAAGAGTTGTGCGTAAGCAGGCTGAAGTTTGACTTTGAGAGTC
GGAGTACGAGTTGAATGCAAGGAGGCTTATCATGCTTGATGCGTTTGGCA
AAAC back to topCoding sequence (CDS) from alignment at Scaffold_228:505560..507413+ >EsuBft144_11a-0001 ID=EsuBft144_11a-0001|Name=EsuBft144_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=555bp|location=Sequence derived from alignment at Scaffold_228:505560..507413+ (Ectocarpus subulatus male Bft15b)
ATGAGTTGGACTACCTCGTACCTCTGGGGGGAGATTTTTCAGTGTGGGAA
CGCGTACCTCCAAGATCCGATCGTGTTTACGCGATTTATCGACTCTCTAC
CGTCCGAATATGAGGTATCGAAGGAGACGCTGGCATCCACCATAGACCTC
ATAAGGGACACCCTCATCCGGGTGGTGGTTACCCGGTTCCGCACCATCAG
CAAGAAAGCGGCGCGGGCGAAAGCGCCAAAGGCAGTAAAACAGGCCTTCC
TCGCTAGGGACGGCGGGGGGGGGCAACGGGGCGGCCGTAGCAACGGGCGG
AACAAGAGAGGAAAAGGCGGTGGCACCGGCGAGAACAATAGCAAATCGAA
CGGCGACGCCCCTGACCATCAGCGGTGCTTCAGGGACAACCAGAAGGGAC
ACTACAAATGGGACTGGGACACGGAGGAGTCCAAGTTCATCCCGAGGTGC
GAAAAATGCTCGGGGTTCGGCCACACCAAGGAAAAGTGCCCGTCTGTTGA
TGAAGTGGCGACGCTGGCGATCCAACTGCCTGAGCGGTGCAGCAGCCTGG
AGTAA back to top
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