Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1445_6 |
| Protein domains | TMhelix |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 264 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Acyl-CoA-binding protein, ACBP |
| Ec32 ortholog | Ec-13_003520.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1445_6a-0001 ID=EsuBft1445_6a-0001|Name=EsuBft1445_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2643bp|location=Sequence derived from alignment at Scaffold_228:240502..243748+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGCCGCTGCCGCCATTTGTCGAGGAAGAAAAGCGAAAATCCGCGGC
TGCTTTCGTGGCGGTTAAGGGTACGAGGATGAACAACGTCACCAACAACA
ACGACAACAACGACAACAACACCGACAACGGCATCGCGCGCTACGGGACC
ATGGGCGGCGGACGCGCGCGGGCCACCGCCACCGCCGCCGTACCCGCAAC
CGTATCCGCTGCTTCCCCGCGGTCGGCCTCCGCGGCCATGGCCGCCGGTG
CTGCCGCCGCCGCGGCCGCCTCCGCCGCCGTCTCCACCGACGACGATACC
TCCGAGGGCGGGACGGCGACCCCGCCGTCGCCGCCGCAGGCATCACCGGC
GGCGACGACCATGGCGTCGGAGAGGAACAGCCCGGTCGCCTTCCGGTCCC
TGGCCAGCACTCCCCGCAAGGCGCGAATCCTGCTCGGGCTCGAGCATCAC
GATGTCGTCGCCTGCGCGCCGAGCCCTCCCAGTCGGATCGGGGTCAGGCG
CCTGAGCGGCGGAGGGGGCGGAAAGGTGAAGGGCCCGGACGGCACCAGGT
TTCTGTCTGGCGGCGGCGGCGGCGGTATCGGCGGCGGTTCCACTTTTCGG
ATGATGGCCGGGGCCAGCAGTGTTTTCCACAGCGGGAGCAAGGGTAACAA
CAACAATAACAACAACAACAACAACAACAACAACAACGATGATGACCCGA
ATTCGATCAACAGCCTCTCGACCGCCACCTCGACGACGTCCTCGTCGTGC
TGCGGCAGCACCGGGGGCTCCATGTGTGGGGGGAAGGGGTGCGGCGGGGG
CTCCGGGTTTTGCGGGGCAGGGGTGGGGTCTAGGAGCCCGTGCTGCGGGG
CCACCCCTCCTCCTCCTCCCACCAGCGCCGCCGCCGCGGCCGTCGCCGCC
AACCCCGCCCATTTCACCGGTATTACTTCCGTCGGTGGCTTCGGTCGTGG
TGGTAGCCTGCGGCCGGCGATCGAGGCCGCGGAAGAGGCGCTGGCGGCGG
CGACGGTAGCGGTGTCGCCGGTGGACGGCACCCCCCCTTCGTCTTGCCCG
TCTTATTCTCCTCGCGGCATCACCGGCCGGCCGTACGACCGCCACGACGC
CGCCGCCGACGCCGTTGCGGCTCCTGCCACCGCCCCCGCCGGAACGGGGG
AGGGCCGCCGCGTAAGGACCGCGAGCGGTGGCGACAGCACTCGGCTAGCG
CTGCCCCGGTGGACGCCGGGTGAGGACCTAGCCTCTGGAGCAGCGGCGGC
GGCGGGGACGGAAGGGGGGGATGGTATTACGTCGTCGCCCCCTACATCGG
CAACATCTGCCGAAACGCCAGCGACGGCAGCGTCGCACCGGTCGTTCTCC
TCCCCCCCCGACCCTCCGACGAGAGAGTCAATCTACGGTGCCCCTCAGGC
CGCGACAGAGGCGGTGGTAACGACGGGTCGACAAAGTGGTGGGACGACGG
GGACGGGGTTCCTACCGCCGCCGCCGCCACCGCAGTATGTTGCCGGCGAA
GGGGATGCATCGTTTCTTACGCCGCCCATGTCCTCGGAAGAAGCTGGTGC
TGCTTCATCTTTCATGATGCCCGCTAGGCCTACCCGAGAGTCGATCCACG
ATGCCGTTAACGCAGCAGCGGCCGCCGTGGAATCCTCAGAGGCGGGGGTA
CAGTCGCCGCCGCCGGTGGTTGACTCATCTACGGCGGCATCAACGGCGGC
GGCGGCGGCGGCGGCGGAAATAGGGGCGGCGATTGGGGCGGAAGAAGACG
ATGAAGAAGTGTGCCTAGGGTGGAGCTCGCGGCCCTCCGCCTCCTCGTCC
CCTCCGTCGCCCTTGTCGTTCCCGCGCAAATCCTCCTCCTCTCACGCCAT
GTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTG
CAGATCCCATGGACAGCTACCGCACCCGCGAAGGAGCCGACGCCAGCACA
GGCGACAGACCCGGCGGGAACGGTGGCGGCGGCGCTGGCGGCGGTGGCAG
CAGTGATAGCAACCCCACTCGAAGGACTTTCCTTCCCCCGGCACCCCGCA
CGGTGAGCGGGATGGTGGCTTCGACCACCGCCGTTCAGGGCGAGAGGACT
TTTCAGACGGAAGCTGGGGATCGGGCGGGAGCGGGGGAGGGGAGCCGGAT
TGGCTTTTCTTCTTCTTCGACGGCGGCAGAAGGTCCTGGAGGAACGGCGC
TTGGAGGCGGCCAGTATCCGCTGTCCCCCATGCCGCGGATCCTGCCCAAC
GCTTTCAGGACATCCCCACAGGAAGCATCGTCAGCAGCGTCAGCAGCGTC
AGCTGGCGAGGGCGGCGGCGGCGGCGGGATTCCAGAGGCGTTTGCCCTTG
CCAGGGAGCGCGCGAAGGAGCTTCGACCCCTTGGGTCGCCCAGGGCGGCA
GCGGAGCTAGGGGGACTGTTGCGCCAGGCGAGCGAATCCTTTATTTATTT
TGTTTTGTTTTTCGCCTCGAGGCCGAGATGGAGGCCCTCGACCCTCAATT
CTGTTTCTCTATTTTTGGCGTCAATTTCTTTTCCTTCGATAGCTGCTATA
CTCTTTCGTTTTTTATTTATTTTTTTCCCAATGGTGCGGGGGCTCTGTGC
ACCCTACCGCGTTCTATTCTACCCGATCGTCGTCGGCATGTAG back to topprotein sequence of EsuBft1445_6a-0001 >EsuBft1445_6 ID=EsuBft1445_6|Name=EsuBft1445_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=880bp
MPPLPPFVEEEKRKSAAAFVAVKGTRMNNVTNNNDNNDNNTDNGIARYGT
MGGGRARATATAAVPATVSAASPRSASAAMAAGAAAAAAASAAVSTDDDT
SEGGTATPPSPPQASPAATTMASERNSPVAFRSLASTPRKARILLGLEHH
DVVACAPSPPSRIGVRRLSGGGGGKVKGPDGTRFLSGGGGGGIGGGSTFR
MMAGASSVFHSGSKGNNNNNNNNNNNNNNDDDPNSINSLSTATSTTSSSC
CGSTGGSMCGGKGCGGGSGFCGAGVGSRSPCCGATPPPPPTSAAAAAVAA
NPAHFTGITSVGGFGRGGSLRPAIEAAEEALAAATVAVSPVDGTPPSSCP
SYSPRGITGRPYDRHDAAADAVAAPATAPAGTGEGRRVRTASGGDSTRLA
LPRWTPGEDLASGAAAAAGTEGGDGITSSPPTSATSAETPATAASHRSFS
SPPDPPTRESIYGAPQAATEAVVTTGRQSGGTTGTGFLPPPPPPQYVAGE
GDASFLTPPMSSEEAGAASSFMMPARPTRESIHDAVNAAAAAVESSEAGV
QSPPPVVDSSTAASTAAAAAAAEIGAAIGAEEDDEEVCLGWSSRPSASSS
PPSPLSFPRKSSSSHAMSAAAAAAAAAAAAAGCADPMDSYRTREGADAST
GDRPGGNGGGGAGGGGSSDSNPTRRTFLPPAPRTVSGMVASTTAVQGERT
FQTEAGDRAGAGEGSRIGFSSSSTAAEGPGGTALGGGQYPLSPMPRILPN
AFRTSPQEASSAASAASAGEGGGGGGIPEAFALARERAKELRPLGSPRAA
AELGGLLRQASESFIYFVLFFASRPRWRPSTLNSVSLFLASISFPSIAAI
LFRFLFIFFPMVRGLCAPYRVLFYPIVVGM back to topmRNA from alignment at Scaffold_228:240502..243748+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1445_6a-0001 ID=EsuBft1445_6a-0001|Name=EsuBft1445_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3247bp|location=Sequence derived from alignment at Scaffold_228:240502..243748+ (Ectocarpus subulatus male Bft15b)
ATGCCGCCGCTGCCGCCATTTGTCGAGGAAGAAAAGCGAAAATCCGCGGC
TGCTTTCGTGGCGGTTAAGGGTACGAGGATGAACAACGTCACCAACAACA
ACGACAACAACGACAACAACACCGACAACGGCATCGCGCGCTACGGGACC
ATGGGCGGCGGACGCGCGCGGGCCACCGCCACCGCCGCCGTACCCGCAAC
CGTATCCGCTGCTTCCCCGCGGTCGGCCTCCGCGGCCATGGCCGCCGGTG
CTGCCGCCGCCGCGGCCGCCTCCGCCGCCGTCTCCACCGACGACGATACC
TCCGAGGGCGGGACGGCGACCCCGCCGTCGCCGCCGCAGGCATCACCGGC
GGCGACGACCATGGCGTCGGAGAGGAACAGCCCGGTCGCCTTCCGGTCCC
TGGCCAGCACTCCCCGCAAGGCGCGAATCCTGCTCGGGCTCGAGCATCAC
GATGTCGTCGCCTGCGCGCCGAGCCCTCCCAGTCGGATCGGGGTCAGGCG
CCTGAGCGGCGGAGGGGGCGGAAAGGTGAAGGGCCCGGACGGCACCAGGT
TTCTGTCTGGCGGCGGCGGCGGCGGTATCGGCGGCGGTTCCACTTTTCGG
ATGATGGCCGGGGCCAGCAGTGTTTTCCACAGCGGGAGCAAGGGTAACAA
CAACAATAACAACAACAACAACAACAACAACAACAACGATGATGACCCGA
ATTCGATCAACAGCCTCTCGACCGCCACCTCGACGACGTCCTCGTCGTGC
TGCGGCAGCACCGGGGGCTCCATGTGTGGGGGGAAGGGGTGCGGCGGGGG
CTCCGGGTTTTGCGGGGCAGGGGTGGGGTCTAGGAGCCCGTGCTGCGGGG
CCACCCCTCCTCCTCCTCCCACCAGCGCCGCCGCCGCGGCCGTCGCCGCC
AACCCCGCCCATTTCACCGGTATTACTTCCGTCGGTGGCTTCGGTCGTGG
TGGTAGCCTGCGGCCGGCGATCGAGGCCGCGGAAGAGGCGCTGGCGGCGG
CGACGGTAGCGGTGTCGCCGGTGGACGGCACCCCCCCTTCGTCTTGCCCG
TCTTATTCTCCTCGCGGCATCACCGGCCGGCCGTACGACCGCCACGACGC
CGCCGCCGACGCCGTTGCGGCTCCTGCCACCGCCCCCGCCGGAACGGGGG
AGGGCCGCCGCGTAAGGACCGCGAGCGGTGGCGACAGCACTCGGCTAGCG
CTGCCCCGGTGGACGCCGGGTGAGGACCTAGCCTCTGGAGCAGCGGCGGC
GGCGGGGACGGAAGGGGGGGATGGTATTACGTCGTCGCCCCCTACATCGG
CAACATCTGCCGAAACGCCAGCGACGGCAGCGTCGCACCGGTCGTTCTCC
TCCCCCCCCGACCCTCCGACGAGAGAGTCAATCTACGGTGCCCCTCAGGC
CGCGACAGAGGCGGTGGTAACGACGGGTCGACAAAGTGGTGGGACGACGG
GGACGGGGTTCCTACCGCCGCCGCCGCCACCGCAGTATGTTGCCGGCGAA
GGGGATGCATCGTTTCTTACGCCGCCCATGTCCTCGGAAGAAGCTGGTGC
TGCTTCATCTTTCATGATGCCCGCTAGGCCTACCCGAGAGTCGATCCACG
ATGCCGTTAACGCAGCAGCGGCCGCCGTGGAATCCTCAGAGGCGGGGGTA
CAGTCGCCGCCGCCGGTGGTTGACTCATCTACGGCGGCATCAACGGCGGC
GGCGGCGGCGGCGGCGGAAATAGGGGCGGCGATTGGGGCGGAAGAAGACG
ATGAAGAAGTGTGCCTAGGGTGGAGCTCGCGGCCCTCCGCCTCCTCGTCC
CCTCCGTCGCCCTTGTCGTTCCCGCGCAAATCCTCCTCCTCTCACGCCAT
GTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTG
CAGATCCCATGGACAGCTACCGCACCCGCGAAGGAGCCGACGCCAGCACA
GGCGACAGACCCGGCGGGAACGGTGGCGGCGGCGCTGGCGGCGGTGGCAG
CAGTGATAGCAACCCCACTCGAAGGACTTTCCTTCCCCCGGCACCCCGCA
CGGTGAGCGGGATGGTGGCTTCGACCACCGCCGTTCAGGGCGAGAGGACT
TTTCAGACGGAAGCTGGGGATCGGGCGGGAGCGGGGGAGGGGAGCCGGAT
TGGCTTTTCTTCTTCTTCGACGGCGGCAGAAGGTCCTGGAGGAACGGCGC
TTGGAGGTGGGCCAAAAACGAGGCAGGAAAAACACCCTGAGGCAAAAAAA
TACGGAGAGGTGTTCTTTTGCCTGTGTTGTTCGCATTACCTTCATGGGTA
CCACGAAGTTCTTGGTGCTGTTTTATCTCAGAGAAACATCGCACGTGTTG
TGTAGTACGGAGACATGCATAGAGGGGTGCAACGCAGAGCCTACCCGCTG
CGGCATCACGAGCTCTTGTTGTTGCTGTTGTTGTTGTTTTTGTTGTTGTT
GTTGTTGCTGCTGCTGCTGATTAAGCTGTCGTCGTCGTCGTCGTTGTCGT
TGTCTTGTCGTCATACTATTCCACCGACCTCTACCCGGTACCGTTGAGCA
TCTCCACTGCTGGCCCAAGGATGCGGACGCCTGCCTTATGTGGGCAAAGG
CCAACTATCTACCACCCAGCAATGGCACTACATGCGTGACACCATGCTTT
TAAGGCGAAGCACTCCTCCCTAGGGGGCACAACATTCGCGAAACCTTATT
TTAAAGGCTAGCTACACCCGACCCGGGCGCTAAAACACTGCTGTACTTAT
GTACAACCATACTTCTGCGTTTTTCTTTTTGCCTGTCCCCTGCTTCCGCT
CCGTCGACAGGCGGCCAGTATCCGCTGTCCCCCATGCCGCGGATCCTGCC
CAACGCTTTCAGGACATCCCCACAGGAAGCATCGTCAGCAGCGTCAGCAG
CGTCAGCTGGCGAGGGCGGCGGCGGCGGCGGGATTCCAGAGGCGTTTGCC
CTTGCCAGGGAGCGCGCGAAGGAGCTTCGACCCCTTGGGTCGCCCAGGGC
GGCAGCGGAGCTAGGGGGACTGTTGCGCCAGGCGAGCGAATCCTTTATTT
ATTTTGTTTTGTTTTTCGCCTCGAGGCCGAGATGGAGGCCCTCGACCCTC
AATTCTGTTTCTCTATTTTTGGCGTCAATTTCTTTTCCTTCGATAGCTGC
TATACTCTTTCGTTTTTTATTTATTTTTTTCCCAATGGTGCGGGGGCTCT
GTGCACCCTACCGCGTTCTATTCTACCCGATCGTCGTCGGCATGTAG back to topCoding sequence (CDS) from alignment at Scaffold_228:240502..243748+ >EsuBft1445_6a-0001 ID=EsuBft1445_6a-0001|Name=EsuBft1445_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2643bp|location=Sequence derived from alignment at Scaffold_228:240502..243748+ (Ectocarpus subulatus male Bft15b)
ATGCCGCCGCTGCCGCCATTTGTCGAGGAAGAAAAGCGAAAATCCGCGGC
TGCTTTCGTGGCGGTTAAGGGTACGAGGATGAACAACGTCACCAACAACA
ACGACAACAACGACAACAACACCGACAACGGCATCGCGCGCTACGGGACC
ATGGGCGGCGGACGCGCGCGGGCCACCGCCACCGCCGCCGTACCCGCAAC
CGTATCCGCTGCTTCCCCGCGGTCGGCCTCCGCGGCCATGGCCGCCGGTG
CTGCCGCCGCCGCGGCCGCCTCCGCCGCCGTCTCCACCGACGACGATACC
TCCGAGGGCGGGACGGCGACCCCGCCGTCGCCGCCGCAGGCATCACCGGC
GGCGACGACCATGGCGTCGGAGAGGAACAGCCCGGTCGCCTTCCGGTCCC
TGGCCAGCACTCCCCGCAAGGCGCGAATCCTGCTCGGGCTCGAGCATCAC
GATGTCGTCGCCTGCGCGCCGAGCCCTCCCAGTCGGATCGGGGTCAGGCG
CCTGAGCGGCGGAGGGGGCGGAAAGGTGAAGGGCCCGGACGGCACCAGGT
TTCTGTCTGGCGGCGGCGGCGGCGGTATCGGCGGCGGTTCCACTTTTCGG
ATGATGGCCGGGGCCAGCAGTGTTTTCCACAGCGGGAGCAAGGGTAACAA
CAACAATAACAACAACAACAACAACAACAACAACAACGATGATGACCCGA
ATTCGATCAACAGCCTCTCGACCGCCACCTCGACGACGTCCTCGTCGTGC
TGCGGCAGCACCGGGGGCTCCATGTGTGGGGGGAAGGGGTGCGGCGGGGG
CTCCGGGTTTTGCGGGGCAGGGGTGGGGTCTAGGAGCCCGTGCTGCGGGG
CCACCCCTCCTCCTCCTCCCACCAGCGCCGCCGCCGCGGCCGTCGCCGCC
AACCCCGCCCATTTCACCGGTATTACTTCCGTCGGTGGCTTCGGTCGTGG
TGGTAGCCTGCGGCCGGCGATCGAGGCCGCGGAAGAGGCGCTGGCGGCGG
CGACGGTAGCGGTGTCGCCGGTGGACGGCACCCCCCCTTCGTCTTGCCCG
TCTTATTCTCCTCGCGGCATCACCGGCCGGCCGTACGACCGCCACGACGC
CGCCGCCGACGCCGTTGCGGCTCCTGCCACCGCCCCCGCCGGAACGGGGG
AGGGCCGCCGCGTAAGGACCGCGAGCGGTGGCGACAGCACTCGGCTAGCG
CTGCCCCGGTGGACGCCGGGTGAGGACCTAGCCTCTGGAGCAGCGGCGGC
GGCGGGGACGGAAGGGGGGGATGGTATTACGTCGTCGCCCCCTACATCGG
CAACATCTGCCGAAACGCCAGCGACGGCAGCGTCGCACCGGTCGTTCTCC
TCCCCCCCCGACCCTCCGACGAGAGAGTCAATCTACGGTGCCCCTCAGGC
CGCGACAGAGGCGGTGGTAACGACGGGTCGACAAAGTGGTGGGACGACGG
GGACGGGGTTCCTACCGCCGCCGCCGCCACCGCAGTATGTTGCCGGCGAA
GGGGATGCATCGTTTCTTACGCCGCCCATGTCCTCGGAAGAAGCTGGTGC
TGCTTCATCTTTCATGATGCCCGCTAGGCCTACCCGAGAGTCGATCCACG
ATGCCGTTAACGCAGCAGCGGCCGCCGTGGAATCCTCAGAGGCGGGGGTA
CAGTCGCCGCCGCCGGTGGTTGACTCATCTACGGCGGCATCAACGGCGGC
GGCGGCGGCGGCGGCGGAAATAGGGGCGGCGATTGGGGCGGAAGAAGACG
ATGAAGAAGTGTGCCTAGGGTGGAGCTCGCGGCCCTCCGCCTCCTCGTCC
CCTCCGTCGCCCTTGTCGTTCCCGCGCAAATCCTCCTCCTCTCACGCCAT
GTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTG
CAGATCCCATGGACAGCTACCGCACCCGCGAAGGAGCCGACGCCAGCACA
GGCGACAGACCCGGCGGGAACGGTGGCGGCGGCGCTGGCGGCGGTGGCAG
CAGTGATAGCAACCCCACTCGAAGGACTTTCCTTCCCCCGGCACCCCGCA
CGGTGAGCGGGATGGTGGCTTCGACCACCGCCGTTCAGGGCGAGAGGACT
TTTCAGACGGAAGCTGGGGATCGGGCGGGAGCGGGGGAGGGGAGCCGGAT
TGGCTTTTCTTCTTCTTCGACGGCGGCAGAAGGTCCTGGAGGAACGGCGC
TTGGAGGCGGCCAGTATCCGCTGTCCCCCATGCCGCGGATCCTGCCCAAC
GCTTTCAGGACATCCCCACAGGAAGCATCGTCAGCAGCGTCAGCAGCGTC
AGCTGGCGAGGGCGGCGGCGGCGGCGGGATTCCAGAGGCGTTTGCCCTTG
CCAGGGAGCGCGCGAAGGAGCTTCGACCCCTTGGGTCGCCCAGGGCGGCA
GCGGAGCTAGGGGGACTGTTGCGCCAGGCGAGCGAATCCTTTATTTATTT
TGTTTTGTTTTTCGCCTCGAGGCCGAGATGGAGGCCCTCGACCCTCAATT
CTGTTTCTCTATTTTTGGCGTCAATTTCTTTTCCTTCGATAGCTGCTATA
CTCTTTCGTTTTTTATTTATTTTTTTCCCAATGGTGCGGGGGCTCTGTGC
ACCCTACCGCGTTCTATTCTACCCGATCGTCGTCGGCATGTAG back to top
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