EsuBft1352_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft1352_6a-0001
Unique Name	EsuBft1352_6a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_70:182865..185756-
coding sequence from alignment at Scaffold_70:182865..185756-

spliced messenger RNA

>EsuBft1352_6a-0001 ID=EsuBft1352_6a-0001|Name=EsuBft1352_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2732bp|location=Sequence derived from alignment at Scaffold_70:182865..185756- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCCGGAAAATAGGGCCGCGGTACGTTAGCAATCTGCGCGTGGGAAA
CGTTGGGCGGCGGATAGTTACCACCACGGCCGCCCACCTGACGACCTCGG
CTCTCCGGGGGGGAAGGATCGTATCCACCATACCCACGCCCCCCAGAGTT
GCGCCCCTGCAGTTGTCCTCCAGCTTCGGATCCTAGCCCACGCGGCGGTC
CCGGCAGCGCTGGAGAGTGACCCCCACTCCAGCCCGCACCTTGTTCATTT
TGGTACGGCTGCTGTCAAGATGGGCCACCAACCATCCGCCCCGAGTCTTG
AGCTCCGCCTCGAGGGAAGACCGACCCCTGGGCCTCCCGCCTCCCCCTCA
TGTACGCGCAGAACTCGTTGTAGTGGGCGAGTAATTCGTGGCGTAACTTG
CGACATTCGGAGGTCTCGTGGGTGCTGTTGGGGCCGTGGAGCTGGCAGAA
GTGCGATGGCTGTTGCTGATGTGGCTGCACCGACCCCTGTGGTTGCTGGA
GTCGATGTCCGCCTTGCTCCAATCCTGCAGCGGCTGGTTTCCCCGCCCCG
CCGCCCCGGCCCACGCCGGCAGCGACAAGGGCCTGCCTCATCTCTTCCTT
CCCCTCTCCAGCTCTCCGCTCGTACCTCAGCTCGTGCTCTTCCAACCTCA
GCATCTCCTGCATTGTAGCCCTCGACAACATCGAATCAAACAGAAGACGG
TCTTTAGTTTCCTCAAACCTTGGGAGAAATCCCCGGACGATGTGCCTGCA
CATCGATTTTTTATCGCTGTTATCACCATTCGATCGAAGTCTCATCCACA
GCGCAACGGCCCTACCGTAATAGTCCATAAGACTCGCTCCTTGCCTCCGG
CCTATTACGTTTCATGCGTCGTCAAGAGTTTGTCGCTCCTGACTCTTGTC
TTGGCTGTATTGTTCGAGAAACACGCGGTACCCTGCTTGAGGTGATTCTG
ATGCCAAGATTTGGGCTTGTACGGGTTGTGCTGTGATCTTTGCTAGCATA
AACGTCCAAATCTTCCTGGATTGCTTCACTCTCTCCTCTCCGAACGTGCT
CCTCAACCAGTTCAAATCCACAACAGGAGCTGCCCCAACAGGGACCTCTG
AACTCCTCATCACACCAACAAGTCCCTCACTCTCCAGGCACGCTTCAAAA
GCACTCGTGAACACTCGCAGTGCGACTTCGATCGATCTGTTCTTCAGATA
GTCATCCCTCCATGCTGGTACATCTATCATTTCTCTCTGCCTCAGTTCTA
AAATCTGGTTGCTAGACGTGCCTGAGTGGGCACGGTGCCCCTGGTCATGA
GTTGATGTCGCGAAGGCCTGCTTGAAGAGGTCAACCAGCTCACGCATCGT
GTCGCGCTGATCTTCCCCTCCTGCCGCTCGCGCACCCCCTCGGTCTCGTG
CATCGTTGACGAAGAAATAATCGCTCCCTCTTCCGTCCGCGACGCCTTCC
CCGGGGGCAGGGACAGCCTGACCTGATCCCCCGGAGGTTGTCTTCCGTCT
CCGTCCGGCATGTTAGACACGGCGATAACTCTCTTGATCGTTACGCTAGC
GTGTTGAGTAGCTTTGTGCGTCGGTGCCTTGGCGCGCGGGGTCCCTTGGG
TGGGAAATAAAAAAGCCAGCGGCGCGGTAGCCGCCAACGGTACAGTGTAG
GAACTAATGGGCGTGACAGCCTTCTACTTTGGGGTGGAGCGTGATGGCTC
GGGTATGGTATCTCTGGATGTGGCGTGGAAGCCTGGTGACGTGATAGTCG
TGGTGTAAAGGAATATGTAAGGACGTTGATGTCCGGAAGGCGTGATCGCC
GAGTGGCGTGATAGCCAGGATTGGCGTGGAAGTCGTGGCGTGATAGCCGT
GGAAGCGTGGTAGCCGGGGAAAAAGGAATTAAAATTTATTGCACACAGGA
AGGAGGAAAAAGAGGAAAAAAATAACAAGTGAGAAACCACAACACACAAT
CACCATATCCGTTGTAGACACACACATACCCCCACCCTCAATCCTGTAAT
ATATGGCAAAGTTGGTACCATCAAATCGAATCCAAAGCAACTGCTGAATC
CCCAAACTCCCCGCTCCACCTGCTCGGAAATTTCTTGCTTGCAATAATCT
GTCGATGCTGTGAGTACGTCAAACACTCAGCTCCGATCACTTTGCGTGTC
AAAAGATCGCCGTTGTGCCTCGGCTAAGAGCAAAAAACATACATAGAGAC
CAGCAGGGCGACACAGGNGTCGGTGTAGGCAGCAATGCCCATCTCATCTT
TGTGCGCGGAGGCAGACGTCATCAGAAAGGTGGACGGGCACTATGTACAC
GGCCCTAGGTTTGCTAGAGGGAGCTGTACTGTCTCAGTAACCTGGTTTTG
CCATCAAAGGAGGAGGGGACAGGTGGTGACGAGCTGATTGGGCTGGTTGA
CCCTTCGGCGCGAGAATTTTCAGACCAAGAACCGTAAGTGCAATGAGAGG
GAGAAAGCGAGGAACCGACTGGGAAGGACAGCAACGAGAGCGTGTAAGAA
GCGGAGCGGGTCGAGTTTGGTCGTGCTAGGACTGGCCACAGCGGCACCGG
AGCAGCGGCACCGGAGCAGCGGAACCGGAGCATGCGGACGGCATCGAACC
GTGGCGCACGGACAAACATCTCTTGTGTAGTCAATTTTTTCCCGTTTTTT
TCCTGAAAATAGGTGTTGGGTGTGTGTGATGACGTCAGTCACTGGTTTTA
TAGAGAGACGTGGCAGAGATGGCGCGGATAAC

protein sequence of EsuBft1352_6a-0001

>EsuBft1352_6 ID=EsuBft1352_6|Name=EsuBft1352_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=61bp
MSRKIGPRYVSNLRVGNVGRRIVTTTAAHLTTSALRGGRIVSTIPTPPRV
APLQLSSSFGS

mRNA from alignment at Scaffold_70:182865..185756-

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1352_6a-0001 ID=EsuBft1352_6a-0001|Name=EsuBft1352_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2892bp|location=Sequence derived from alignment at Scaffold_70:182865..185756- (Ectocarpus subulatus male Bft15b)
ATGAGCCGGAAAATAGGGCCGCGGTACGTTAGCAATCTGCGCGTGGGAAA
CGTTGGGCGGCGGATAGTTACCACCACGGCCGCCCACCTGACGACCTCGG
CTCTCCGGGGGGGAAGGATCGTATCCACCATACCCACGCCCCCCAGAGTT
GCGCCCCTGCAGTTGTCCTCCAGCTTCGGATCCTAGCCCACGCGGCGGTC
CCGGCAGCGCTGGAGAGTGACCCCCACTCCAGCCCGCACCTTGTTCATTT
TGGTACGGCTGCTGTCAAGATGGGCCACCAACCATCCGCCCCGAGTCTTG
AGCTCCGCCTCGAGGGAAGACCGACCCCTGGGCCTCCCGCCTCCCCCTCA
TGTACGCGCAGAACTCGTTGTAGTGGGCGAGTAATTCGTGGCGTAACTTG
CGACATTCGGAGGTCTCGTGGGTGCTGTTGGGGCCGTGGAGCTGGCAGAA
GTGCGATGGCTGTTGCTGATGTGGCTGCACCGACCCCTGTGGTTGCTGGA
GTCGATGTCCGCCTTGCTCCAATCCTGCAGCGGCTGGTTTCCCCGCCCCG
CCGCCCCGGCCCACGCCGGCAGCGACAAGGGCCTGCCTCATCTCTTCCTT
CCCCTCTCCAGCTCTCCGCTCGTACCTCAGCTCGTGCTCTTCCAACCTCA
GCATCTCCTGCATTGTAGCCCTCGACAACATCGAATCAAACAGAAGACGG
TCTTTAGTTTCCTCAAACCTTGGGAGAAATCCCCGGACGATGTGCCTGCA
CATCGATTTTTTATCGCTGTTATCACCATTCGATCGAAGTCTCATCCACA
GCGCAACGGCCCTACCGTAATAGTCCATAAGACTCGCTCCTTGCCTCCGG
CCTATTACGTTTCATGCGTCGTCAAGAGTTTGTCGCTCCTGACTCTTGTC
TTGGCTGTATTGTTCGAGAAACACGCGGTACCCTGCTTGAGGTGATTCTG
ATGCCAAGATTTGGGCTTGTACGGGTTGTGCTGTGATCTTTGCTAGCATA
AACGTCCAAATCTTCCTGGATTGCTTCACTCTCTCCTCTCCGAACGTGCT
CCTCAACCAGTTCAAATCCACAACAGGAGCTGCCCCAACAGGGACCTCTG
AACTCCTCATCACACCAACAAGTCCCTCACTCTCCAGGCACGCTTCAAAA
GCACTCGTGAACACTCGCAGTGCGACTTCGATCGATCTGTTCTTCAGATA
GTCATCCCTCCATGCTGGTACATCTATCATTTCTCTCTGCCTCAGTTCTA
AAATCTGGTTGCTAGACGTGCCTGAGTGGGCACGGTGCCCCTGGTCATGA
GTTGATGTCGCGAAGGCCTGCTTGAAGAGGTCAACCAGCTCACGCATCGT
GTCGCGCTGATCTTCCCCTCCTGCCGCTCGCGCACCCCCTCGGTCTCGTG
CATCGTTGACGAAGAAATAATCGCTCCCTCTTCCGTCCGCGACGCCTTCC
CCGGGGGCAGGGACAGCCTGACCTGATCCCCCGGAGGTTGTCTTCCGTCT
CCGTCCGGCATGTTAGACACGGCGATAACTCTCTTGATCGTTACGCTAGC
GTGTTGAGTAGCTTTGTGCGTCGGTGCCTTGGCGCGCGGGGTCCCTTGGG
TGGGAAATAAAAAAGCCAGCGGCGCGGTAGCCGCCAACGGTACAGTGTAG
GAACTAATGGGCGTGACAGCCTTCTACTTTGGGGTGGAGCGTGATGGCTC
GGGTATGGTATCTCTGGATGTGGCGTGGAAGCCTGGTGACGTGATAGTCG
TGGTGTAAAGGAATATGTAAGGACGTTGATGTCCGGAAGGCGTGATCGCC
GAGTGGCGTGATAGCCAGGATTGGCGTGGAAGTCGTGGCGTGATAGCCGT
GGAAGCGTGGTAGCCGGGGAAAAAGGAATTAAAATTTATTGCACACAGGA
AGGAGGAAAAAGAGGAAAAAAATAACAAGTGAGAAACCACAACACACAAT
CACCATATCCGTTGTAGACACACACATACCCCCACCCTCAATCCTGTAAT
ATATGGCAAAGTTGGTACCATCAAATCGAATCCAAAGCAACTGCTGAATC
CCCAAACTCCCCGCTCCACCTGCTCGGAAATTTCTTGCTTGCAATAATCT
GTCGATGCTGTGAGTACGTCAAACACTCAGCTCCGATCACTTTGCGTGTC
AAAAGATCGCCGTTGTGCCTCGGCTAAGAGCAAAAAACATACATAGAGAC
CAGCAGGGCGACACAGGTAGCCCACCCCAAAAGCACGCTGATCAGCAATG
CGCACAGGACTCACATTGTACATTACTGTTCACCCATGCCTAACTTCCCC
TTCTTCCCCTCGCTGCCTCTGGAAGGTTTTGCGTAGGCATGACCCATAGC
GAGGGGGGAGTCTTTCTAGCGAGCAGGNGTCGGTGTAGGCAGCAATGCCC
ATCTCATCTTTGTGCGCGGAGGCAGACGTCATCAGAAAGGTGGACGGGCA
CTATGTACACGGCCCTAGGTTTGCTAGAGGGAGCTGTACTGTCTCAGTAA
CCTGGTTTTGCCATCAAAGGAGGAGGGGACAGGTGGTGACGAGCTGATTG
GGCTGGTTGACCCTTCGGCGCGAGAATTTTCAGACCAAGAACCGTAAGTG
CAATGAGAGGGAGAAAGCGAGGAACCGACTGGGAAGGACAGCAACGAGAG
CGTGTAAGAAGCGGAGCGGGTCGAGTTTGGTCGTGCTAGGACTGGCCACA
GCGGCACCGGAGCAGCGGCACCGGAGCAGCGGAACCGGAGCATGCGGACG
GCATCGAACCGTGGCGCACGGACAAACATCTCTTGTGTAGTCAATTTTTT
CCCGTTTTTTTCCTGAAAATAGGTGTTGGGTGTGTGTGATGACGTCAGTC
ACTGGTTTTATAGAGAGACGTGGCAGAGATGGCGCGGATAAC

Coding sequence (CDS) from alignment at Scaffold_70:182865..185756-

>EsuBft1352_6a-0001 ID=EsuBft1352_6a-0001|Name=EsuBft1352_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=186bp|location=Sequence derived from alignment at Scaffold_70:182865..185756- (Ectocarpus subulatus male Bft15b)
ATGAGCCGGAAAATAGGGCCGCGGTACGTTAGCAATCTGCGCGTGGGAAA
CGTTGGGCGGCGGATAGTTACCACCACGGCCGCCCACCTGACGACCTCGG
CTCTCCGGGGGGGAAGGATCGTATCCACCATACCCACGCCCCCCAGAGTT
GCGCCCCTGCAGTTGTCCTCCAGCTTCGGATCCTAG