Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1323_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 140 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1323_4a-0001 ID=EsuBft1323_4a-0001|Name=EsuBft1323_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1402bp|location=Sequence derived from alignment at Scaffold_106:31236..36574+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGCGAAGCTTTTGGCGACCATGTTCGTCTACAAGGATGAAGCGGCGT
TTGACTCTGCTCATTTGACTCCAGCCCAGCTGGTCGAAAGCGTTGACGGC
GACGTCGAGGGCTACGTGGACGTGATCCGCTACGCCATCCTCCGACTCCC
CAAGAAGAAGACGACAGCCACCTGTCCGTTTTTTTTTTCCTTGCGCAAGC
AGGCAGAACGAGGGAACGCCAACTTCCGGTACTGGTAGATTGGCCTGAGG
GAGACCATGCCGGTGACAGAGTTTGCCGGCAAAGGATGGAGCGTCGACCC
ACGAGGAAAGGGGAGCAACGGCGACAAACTCACAAAGAAGAACTGCGTGC
TTGACCTGTCCGAGTATGCTTAGATCGCCCGTGACCGAAAGACAGTCACG
CTAGCGTGTGGTTGCAATCCGAACACGGCCCTGTGCAACAGGTGCAGGTG
CAAGAACAAGAAGTGCTCGCTCGCTTGCGGCTGCAGAAATCGTTGCACCC
TACGGCGGGCGGTGCCGGCACCCGTACGAGCAGGGGGGGGGTCTGCGTCA
CGGCCTACGGTGGGTGCTCCTCAAACGAGGCGGGTAGAGGGTACCTCCCG
ACCCCAACCGCCCACCGAGAGTCGATCACGGCCATCCTACAGTGTTGCCA
ATGCCACGGCACTCTTTGCCGCCTCTATGAGGCAGCAGGTATCGCACGGA
GCGGAACAGAACGACGTGGAGGCGGGAACCCCCGAGTCGCCTGTGAGCAA
CGACGTTTCCGCCGGCGAGGCCGCGGAATCTAAGAACGCAGAGTTGGAGG
ACCCCGAGTCGGACGAGAAGTGCGACGGTTCGGTCGGTGCACTCGACGAT
TTGATCAAGTTGGATTCGAGCGAATCTGACACCAGCGATGGGCAATCTGA
CGGGGTGAGCGAGAAGAGCGTCGACTCCAACTGGTGTGGCGGAGACACAA
ATGATGGTGTTGCGGACCTCGTAACCGACGCCTGGAACTGACATCTGGCT
ACTTCTTCAGGCAGGTCCGTCCGTGCTTTACTTTCGTTGGATGCATCCAT
CCACGAAATACGACGACCCCGGGGTACGAGATATCAGACGGACGAACTCA
GCCTAATACTGAAAAGCCGGCTAGGGCGCGCGTTTCCGCCCGCGGCGAAT
TTTCGTTCCTAGTTGCGCACGTAGTTGCGCAGGGAGGTGGACCGGAGGGG
GGGGTATTATTCTTCTGCCAAGCCGGGTGTCCGTTGTTTATTGACATGGT
ATTTTGTTCTCCGCGTTTTTCCGGAAGACTGCCGGATACCTATTATTGGG
GTGCTGTGTGCGTTGGCCCAGTATTGTGTGCGGTGTTCGTGTGTAAGTGA
TTCCGGCGTTCTCGCCACACCCAACGCTCAGGGCGTCCTCATGTACATCG
AG back to topprotein sequence of EsuBft1323_4a-0001 >EsuBft1323_4 ID=EsuBft1323_4|Name=EsuBft1323_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=71bp
MFVYKDEAAFDSAHLTPAQLVESVDGDVEGYVDVIRYAILRLPKKKTTAT
CPFFFSLRKQAERGNANFRYW back to topmRNA from alignment at Scaffold_106:31236..36574+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1323_4a-0001 ID=EsuBft1323_4a-0001|Name=EsuBft1323_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5339bp|location=Sequence derived from alignment at Scaffold_106:31236..36574+ (Ectocarpus subulatus male Bft15b)
ATGCGCGAAGCTTTTGGCGACCATGTTCGTCTACAAGGATGAAGCGGCGT
TTGACTCTGCTCATTTGACTCCAGCCCAGCTGGTCGAAAGCGTTGACGGC
GACGTCGAGGGCTACGTGGACGTGATCCGCTACGCCATCCTCCGACTCCC
CAAGAAGAAGACGACAGCCACCTGTCCGTTTTTTTTTTCCTTGCGCAAGC
AGGCAGAACGAGGGAACGCCAACTTCCGGTACTGGTAGATTGGCCTGAGG
GAGACCATGCCGGTGACAGAGTTTGCCGGCAAAGGATGGAGCGTCGACCC
ACGAGGAAAGGGGAGCAACGGCGACAAACTCACAAAGAAGAACTGCGTGC
TTGACCTGTCCGAGTATGCTTAGATCGCCCGTGACCGAAAGACAGTCACG
CTAGCGTGTGGTTGCAATCCGAACACGGCCCTGTGCAACAGGTGCAGGTG
CAAGAACAAGAAGTGCTCGCTCGCTTGCGGCTGCAGAAATCGTTGCACCC
TACGGCGGGCGGTGCCGGCACCCGTACGAGCAGGGGGGGGGTCTGCGTCA
CGGCCTACGGTGGGTGCTCCTCAAACGAGGCGGGTAGAGGGTACCTCCCG
ACCCCAACCGCCCACCGAGAGTCGATCACGGCCATCCTACAGTGTTGCCA
ATGCCACGGCACTCTTTGCCGCCTCTATGAGGCAGCAGGTATCGCACGGA
GCGGAACAGAACGACGTGGAGGCGGGAACCCCCGAGTCGCCTGTGAGCAA
CGACGTTTCCGCCGGCGAGGCCGCGGAATCTAAGAACGCAGAGTTGGAGG
ACCCCGAGTCGGACGAGAAGTGCGACGGTTCGGTCGGTGCACTCGACGAT
TTGATCAAGTTGGATTCGAGCGAATCTGACACCAGCGATGGGCAATCTGA
CGGGGTGAGCGAGAAGAGCGTCGACTCCAACTGGTGTGGCGGAGACACAA
ATGATGGTGTTGCGGACCTCGTAACCGACGCCTGGAACTGACATCTGGCT
ACTTCTTCAGGCAGGTACATATACAGTGCCGGCCCGCACTTAAGAATATG
GCACGTAAGAATTTGATGCTCAAAACATCCAAAACTTAAGAATTTACCGA
TAAGAACACGTGCTCACCTGGACGCCCTGTTAGGAACAAGAACACACACC
TGAGGTGCAAAACTGCTGCTACAAATACGAACGACAGCAATGCACCAGCT
GCCAGATAAGAATATTCGCAGGGTGAGGGAGGGAAGAGGGGGGAGTGATC
CCAGAGTAGAGAGTATTGGACTTGGGGGGGGGGTGTACTCATAGTCGTGC
ATGCCGTAGTCGTTAGACCATTGACCTCGCATCCCTCCAAGCGACGAAAA
CCCAACCCCGATGGCAAACACCGGGGGGGGGGAGTATTGGACTTGGGAGG
GGTATATACCCCACATATCAATACTTGTATTTTTTTGGACGGGGAGGGTG
GGCATTGTACGCACGCGTCGTGCCCCTCAGTGCCCCCGAGAAAAGCGTGC
GTGCCACGCAACGTGCAGCGTGCCACGAGCTGCCTGCGGTGCAAGGGGAT
CATGTCCTAGTGCAATCCCTTGTCCCGTGGGATATTGAAAGAGCTTGGCA
AACTTGCAGAGTTGAAACAAAGGGGTCTGATTCTTGACCGTCACTTCGAG
CCAATCAAAGCACACGTGAAGGCGGGCAACTCCGTTGCGAAGGAGCGTTG
GGACGCCATCGAGAGCGCGTGGGGGCTGAAGCAGAACGGTGTCTTCGACG
AAGAAGAGTGGGTCACGCAGATTGACGGCGAAACGCAGGGTATTACCAGC
AGCACCCGCCTGTCCTCTTCATCCCAACAAGATGCCGGCAGCGCGCGAGG
TGTTGCACCGCCGACTCAGCACCCACCACCTGCTGCTGCAGGTACCGCGA
GGAGAAAGGCCGTGGATCGCGGGAAGCAAGCTAGGGAGAGAGCTGCCAAA
GGCACTTTAGGCCGCAACATCTGCAACGCGTCCGCGATTGCCAGCCGAGG
ACCGGTGAGCACACAGCAGTTACCTTTCGCTACCGGTGTAGTCTACATGC
ACTATTTTCATTGTTCAAGAAAAACTCCCGTGAAAATGATGACATTATGA
AGGCCATTTTTTTTCAGTAGCGGCGCGTAATAAAAAAAAAAAGAGAAGGT
TTTTAATTTTGGGGCTGGCCTCTGCTGGCAACGACTGCGTTTCGCACGCC
GTTTCTTGCTGTAGGTGCCCAAGCAAGTGGAGGAGTGTCGAGTTATCGTC
AACTGCGTCTGCTGGCAAGAGCCAGCTTCGGTGCAAATACTCCGGAAAGT
TGTGCCTTTTTCAGATACGTGGAATGCTGCTGCTGTGTAGACATGATAAG
GTAAAATTTTCGTCCATCCCCCTTCTTTTCAAGCAAGACCAGAACATTAA
AAGAAAATGGTGTGGACAGATATTCTAGTTTGGATCCCGGCGACTTTGTT
TTGGCGTCACAACAGTTCATGTTCTCTGCTTGATACTTAGTTTGAATAGT
CACGAACGAAACAGACAGCTTTCGGCTCTCCACGGAGGTTTGAGGTCGAA
AGCGCCACACTCCATAGCGAACGATACATGACGGTACTCGTTGAATGACC
CCCCCGGCAACTTCGCCCTACTTCCACCTTGTCATGCAGATTGAGCGGAC
TCGCGGTGGAGTGAAAGAGCTCATATCCGGTATAAGCTTCCCACCTCCGA
CCCCGGAGTCCCGTCGATCTTGCCCTCACTGTCCCATGACCTTCGTGAAC
GAGCAAGGCCTTGGAATCCACGTGAGAACGTAGCACAGCAGTGTAACCAT
GTCCAACGGCGTGCGGCTGCGGCGCATGTTACGGAAGGACGTCGGAGGGA
GTGTCCTGCCGTGGGAAGTAGCCGGGCCTGGGCGTTATTTGCACGTGAAG
TTCGATCATGCGACGGGGTCGGCTTCGTTTGTCCTCCAGCGGAAGCGCTT
TCTCGATCTCGACTTGGATAGCAACGGCTTTATGGACCGCAAACCCAAGG
ACACTAGTGGGGCTCCCAAGCGCAGGCGATACGACTTCAGGTTCAAAGCC
CACGCGATCAACCAGCTGCCATCCTCCAAGACAACGCCGAAGACCTCTGG
AAGGAGGAGCAGCGCACGCCTCTTCAGTTCTTGGAGGATCGTCTCAAGAT
TCCCTACAGCAATATAGTGAAGTGGGCCAAAAACGAGAAGGAATTGGTCG
CGGCGACAGCCGATGACGTAAAGAAGAGCCTCCTCGCCAAACAGCAGCCT
AAGCGGTGGTTTCCTGAGGCAGAGAAGCGACTGTACAAGGGGTTCGTGGA
GCGGCGGAAGAGAAAGCTGAAGGTGTCGACCCTGTGGCTGACGATCACGT
TCCGGAAGCTCGTGCGAGAGATGTACCTTGGGGATCAACGAGCGGCGTCC
TTCCGCGCATCCTTCAGGTGGGCGCGAAAATGGGCCAAGAGGCATAACCT
GTCCAAAAGACGCCGGACCAACCTCAAGAACAAGTCTGTCGAAGAGCGGC
TTCCAAAGATCCAGCGCTTCCACCGGCTGTTTCGCAAGCTCCTGCAAGGG
CCGGTGCGGTACAGGGCGCCGGATGAGTCCGACGTGTCGGCAGTCATGAC
GGTCGCGGAGAGAGAGTCCAGGGTTCCCAAATACGGTCAATTCCAGCTCT
GGTTCGAGAGGTGGGAAACCGCGTCGCTGACAGCTTCTGATCGGCGCGTC
CTCATCACTCAGTGGATGAGAGCGGCCATGGCAAGACTCAACAGCCAACA
GGCCTACCGATATCGTCTTTTCGAAACGTGCGGGATGGCCATGACCGTGG
ACGGCTCGGGCGATGATCGAATCACCTTGGAAGGTTTGGACAAGCCGTAT
ACCTTCGCTAACGATGAAGACAGTAGCGACGACGAACAAGGTTCGGAGAA
CGGCAACGATGAGCCTGAGTGGCGGGCGGAGGAGGGCGATGGAGGACGTG
AGACGCTCATGGAGGGCGTTGACTCCAGCAATGAAGACGACGGCGGTAAG
TTTGTTTTGCATTAAACCAACTCTTCATATTCTTTTTGTTGATGACGATG
TCCTTCATGTTGACAATGGCTTGTTTCCGCGCACGGCTACACTCAAATTA
TGATAAGTTCAGGTTGAGTTTGTCGATGTGTCACCCTAACTTCTTGTGTT
TCCCGTTGCCTCGTTCGCAGACATCTCTCAACCCCAGACCGACGAGCTAG
CTCTTCTGGACGACGACGACAGCATGGACCCACAAGACCCGGAGGATGAG
GTACAGGGAATGGAGATCCCGGCAGGCTTTCGTATTCAAGAAGCTAAACC
CGTTGCTCTTGACAGATTGCTTTCGCTGCGTGGAGTGCTCGTTAGGCTGG
GCATGGGGTGGTTTGGAGGGCTGATCACTCAACAATCTCAGGAGGACACT
CGCCACCTGTACGACTACTGTGTGCAGCTGGAGCTAGACCAGAGTACGCG
CAAGATGAGTTGCCCTTAGACAAGTACAGCGGAGGTTCGGATGCGGCTGT
AGGCTCCTGGGTTTTGCTTGAGAGCATTAGTAGATCAGGAAGGGTACGCA
GGACCGTTGCTGCTCCATGCCTTGGTATTTTCTTGTATCGACAGCATTAC
TGGTGTTGCTCATGGTTGACAGGCGACAATGTAGCAAATGGTTAAAATAC
TGTAAGAACAAGAACGCCCCTTTCTGGAGATGAATGGACGACGAAATAAG
AACTTGGCAAATAAGAACTGGTGCTCGGGTTGGGGCAGCCAATAAGAACT
GAGCCTCGCCCAATATAGTCTAGGAGGTTCTTAAGTGCGGGCCGGCCCTG
TATCGTTCCTTGGGATTGGGGTTGTAGATGTCGTGCCCGCCATTATTGCA
CGTCAGATCTCCACGTCGTACCGAAAGATCGTGTGGTCTGATTTATGCTT
ACTCTATGTTTCAATGACATACTTCGCGCGTCCTTGTTGATGGTTGAACA
GGTCCGTCCGTGCTTTACTTTCGTTGGATGCATCCATCCACGAAATACGA
CGACCCCGGGGTACGAGATATCAGACGGACGAACTCAGCCTAATACTGAA
AAGCCGGCTAGGGCGCGCGTTTCCGCCCGCGGCGAATTTTCGTTCCTAGT
TGCGCACGTAGTTGCGCAGGGAGGTGGACCGGAGGGGGGGGTATTATTCT
TCTGCCAAGCCGGGTGTCCGTTGTTTATTGACATGGTATTTTGTTCTCCG
CGTTTTTCCGGAAGACTGCCGGATACCTATTATTGGGGTGCTGTGTGCGT
TGGCCCAGTATTGTGTGCGGTGTTCGTGTGTAAGTGATTCCGGCGTTCTC
GCCACACCCAACGCTCAGGGCGTCCTCATGTACATCGAG back to topCoding sequence (CDS) from alignment at Scaffold_106:31236..36574+ >EsuBft1323_4a-0001 ID=EsuBft1323_4a-0001|Name=EsuBft1323_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=216bp|location=Sequence derived from alignment at Scaffold_106:31236..36574+ (Ectocarpus subulatus male Bft15b)
ATGTTCGTCTACAAGGATGAAGCGGCGTTTGACTCTGCTCATTTGACTCC
AGCCCAGCTGGTCGAAAGCGTTGACGGCGACGTCGAGGGCTACGTGGACG
TGATCCGCTACGCCATCCTCCGACTCCCCAAGAAGAAGACGACAGCCACC
TGTCCGTTTTTTTTTTCCTTGCGCAAGCAGGCAGAACGAGGGAACGCCAA
CTTCCGGTACTGGTAG back to top
|