Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1323_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 135 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1323_3a-0001 ID=EsuBft1323_3a-0001|Name=EsuBft1323_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1355bp|location=Sequence derived from alignment at Scaffold_106:38522..40303- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGCTTCTCGAACCTAAAAAGCTCCTTGAAGTCGAAGCCTCCGATAG
CGTCGAAGATGTTGTACATCGGGGCCAGAGCCATGATCTGCATGCATTCA
TCATACCGCTCATAGCGGATTCTACCTCGTTCAAGGCGCGCCATTCCCTC
GGTTCGTAGCGTTTACGGGGTGGAGGCTCCGAGGCTCAGCCGTTAGGTTT
TCGGTCTTGCGCTGAGTGTTTTTTTAAAATCGAGATTTCGCCGCTGCTGA
GCTCCGAAAGGAACCCTAAAATGCATAAACGAAACGATACATTTTCGAAA
AGCTCTTGACAAGACGGTTTCAACGCCGCCGTTTTTGGCGCTGTGACTGT
TCCGGCAGTTGAGAAATCGAGCGTCGAAAATCGGTCAAGGGGGTGTGTTA
TCTTGTGTCATATACGGTACATCTGAAAATGTACATGTCTACATGTTGGA
GCGCTCTAGGACACGAGCTACATGCACGAGACTGTTCCGATGTGTACAGA
ATCCTCACATGAAAGACATGCTCCTGCTATGTATACGTGTTGGGGCTAGA
GCCAGACAGCCAGCTTCAGGCAACATACACTCATCGTGGGTGGTACTCTC
GCGACTCACTTGATTCCGTAGACGCTTCGTTATGACCGCGCCTCCCGAGC
TCCTCTCGGCTGCCTTGGCAAAGTCGACCGCCCCGATACAGCGAGAGTGA
TGGTACCCGCAGAGACCGGGGTGCTGCTGCGCCGCGGTCTTCCTTTCCGC
AAGGTTGTTGATCTCGGGTAGGGGCTGCGGCTCTGCTGCTCCGTGTTGAC
GGTAGCGCTGTCCTACCGCCCGGGCTGCAGCCGTGGCGTCGGGAAGTTGG
TCTGGCGTAGAGTTTGCGATCACCAGCAGCTCATCCCAGACAACACGTGG
AGCCGTTTCGGGATGCCATTGGTCTGCTATGTGCTGCCAAAACTGAGCAA
CTTCCTCTCGGTCCATGATGATGGTAGTGATTGGGTTACTTCTGCTGCTG
CTGCTGTTGTGCCTAAAGGTAGAGAGGTAGGAGCGGCAAGGAGACTATCG
TCCCGGGCCACTTTTCGCTCACAATAGCAAGAGTGTTCGGGACTTCAGCT
CCGATCACATCTCCGATCGTCCCGCTTTATCTGTAGTGTTTTTATTCTAT
TTGACCCGATATTTGTTATTTTGGGATTCGTACACACAGCAGTTGGATTT
AGACTTTTCTTCGTTTTGTGCCCAAGTTATCGCTAGCGCACAGGAGTAAG
GGTCCACCTTGCGATGCCTCTCGACGGATCCCCTCTACGTGTGCGTCTCG
GCTTCTCTTTTTCACCGAATGTCATACCACGAGGCCTGCTGCTACTGCTA
CTGCT back to topprotein sequence of EsuBft1323_3a-0001 >EsuBft1323_3 ID=EsuBft1323_3|Name=EsuBft1323_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=52bp
MRLLEPKKLLEVEASDSVEDVVHRGQSHDLHAFIIPLIADSTSFKARHSL
GS back to topmRNA from alignment at Scaffold_106:38522..40303- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1323_3a-0001 ID=EsuBft1323_3a-0001|Name=EsuBft1323_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1782bp|location=Sequence derived from alignment at Scaffold_106:38522..40303- (Ectocarpus subulatus male Bft15b)
ATGAGGCTTCTCGAACCTAAAAAGCTCCTTGAAGTCGAAGCCTCCGATAG
CGTCGAAGATGTTGTACATCGGGTACACACCCTGCAGGGTTGTAGGCGCT
ACTAGCTCTTGGTAGGCCTCCAGTTTGACAAGACCAAACATGGTCATCAC
GAGAAACAAGTCCTCCTCTCCGGCCAATGCGCAGAGCAGGGCCAGAGCCA
TGATCTGCATGCATTCATCATACCGCTCATAGCGGATTCTACCTCGTTCA
AGGCGCGCCATTCCCTCGGTTCGTAGCGTTTACGGGGTGGAGGCTCCGAG
GCTCAGCCGTTAGGTTTTCGGTCTTGCGCTGAGTGTTTTTTTAAAATCGA
GATTTCGCCGCTGCTGAGCTCCGAAAGGTAACAAGCGGCGAAATAAGTTC
GTGTCAAAATATCAACCGTCACTTTTTTTTGACCCGAGCTGCCTTGTGTC
AATATTCTCGGGTCAAAAAAAGGTAGGAACCCTAAAATGCATAAACGAAA
CGATACATTTTCGAAAAGCTCTTGACAAGACGGTTTCAACGCCGCCGTTT
TTGGCGCTGTGACTGTTCCGGCAGTTGAGAAATCGAGCGTCGAAAATCGG
TCAAGGGGGTGTGTTATCTTGTGTCATATACGGTACATCTGAAAATGTAC
ATGTCTACATGTTGGAGCGCTCTAGGACACGAGCTACATGCACGAGACTG
TTCCGATGTGTACAGAATCCTCACATGAAAGACATGCTCCTGCTATGTAT
ACGTGTTGGGGCTAGAGCCAGACAGCCAGCTTCAGGCAACATACACTCAT
CGTGGGTGGTACTCTCGCGACTCACTTGATTCCGTAGACGCTTCGTTATG
ACCGCGCCTCCCGAGCTCCTCTCGGCTGCCTTGGCAAAGTCGACCGCCCC
GATACAGCGAGAGTGATGGTACCCGCAGAGACCGGGGTGCTGCTGCGCCG
CGGTCTTCCTTTCCGCAAGGTTGTTGATCTCGGGTAGGGGCTGCGGCTCT
GCTGCTCCGTGTTGACGGTAGCGCTGTCCTACCGCCCGGGCTGCAGCCGT
GGCGTCGGGAAGTTGGTCTGGCGTAGAGTTTGCGATCACCAGCAGCTCAT
CCCAGACAACACGTGGAGCCGTTTCGGGATGCCATTGGTCTGCTATGTGC
TGCCAAAACTGAGCAACTTCCTCTCGGTCCATGATGATGGTAGTGATTGG
GTTACTTCTGCTGCTGCTGCTGTTGTGCCTAAAGGTAGAGAGGTAGGAGC
GGCAAGGAGACTATCGTCCCGGGCCACTTTTCGCTCACAATAGCAAGAGT
GTTCGGGACTTCAGCTCCGATCACATCTCCGATCGTCCCGCTTTATCTGT
AGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTCTTCACATTAAACCGTATGTCAGGTGATAAATGCC
AAAATCTAGCAAAAGACTCTCAGCCCGTGGTCACGAAAGTGCTAGAGCCA
TCTACCATTGCTCCATGCGGCGCCGCTGTAGTCAGCCCGAGTGTAGAAAT
AGATAATTTTGCACGAGTTTATTCTATTTGACCCGATATTTGTTATTTTG
GGATTCGTACACACAGCAGTTGGATTTAGACTTTTCTTCGTTTTGTGCCC
AAGTTATCGCTAGCGCACAGGAGTAAGGGTCCACCTTGCGATGCCTCTCG
ACGGATCCCCTCTACGTGTGCGTCTCGGCTTCTCTTTTTCACCGAATGTC
ATACCACGAGGCCTGCTGCTACTGCTACTGCT back to topCoding sequence (CDS) from alignment at Scaffold_106:38522..40303- >EsuBft1323_3a-0001 ID=EsuBft1323_3a-0001|Name=EsuBft1323_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=159bp|location=Sequence derived from alignment at Scaffold_106:38522..40303- (Ectocarpus subulatus male Bft15b)
ATGAGGCTTCTCGAACCTAAAAAGCTCCTTGAAGTCGAAGCCTCCGATAG
CGTCGAAGATGTTGTACATCGGGGCCAGAGCCATGATCTGCATGCATTCA
TCATACCGCTCATAGCGGATTCTACCTCGTTCAAGGCGCGCCATTCCCTC
GGTTCGTAG back to top
|