Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1323_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 135 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Secreted hypothetical protein |
| Ec32 ortholog | Ec-22_000675.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1323_2a-0001 ID=EsuBft1323_2a-0001|Name=EsuBft1323_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1359bp|location=Sequence derived from alignment at Scaffold_106:41868..43226- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGGCAAGTTTGAGCAGACGTTCACCAACATTTTCGTGATGTTCAA
AAAGTACGTGTCCCTCTTGGAGGATCAGGCCAACAAGAGAATCAAGGGAG
GAGGCCTAGAGCTTGAGGTGGTGGAGAAGTTGGATAGGGTGTTGGTCGAA
CTGGGCAGGTTGGCCAAGATGGAGAGGGCGGTCTGGGACGAAATGTTGTC
GACGGAGCTCATGGCGAGGTGCAATGTTGGTAGACCGAACAAGGGGGGGA
GACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGGGAGCATTTCG
GTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGAGTAAGACATC
GAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAGGCAGGGGACC
GNCTGATGTCGACGGAGCTCATGGCCAGGTGCAATGTTGGAAGACCGAAC
AAGGGGGGGAGACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGG
GAGCATTTCGGTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGA
GTAAGACATCGAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAG
GCAGGGGACCGGGGTGTTTTGATGTGTCAGGCATGCTTCAAAAACCCTGT
GAGGCACGCTAGGGCTGGAGATGCTCAACGGAACCCCCAGAAGTACGGGG
TGGTGGGACGCAAGGACCTCGTCTGGTGGTCGTGAGCGCATATTTTTTTG
GCCTAATGTTTTACGTTGAATGTGACATGTGTTCCTGGCGGAGGAGACGC
CGATGTGTTTCGAGGGTGCTCCGTTGTGATTTGCCTGGGGGTCAAACTGA
TCTTACAAGTGCATAGTAGTGTCGTTCATCAACCATCTTCCCTTCCGCGA
GGGAGTTGTTGTGCCTTTATCGTCCACTTGTGTTTTCTTGAAAACAACCG
TGGACGAGTGATAGTTTTTGTGCCTTCGTCGTTTACCTGTGTTGCTGATA
ACAGCAGTGGTATAGCTTTTTTCAATTTTATTTGATCTTGTCTCCGATTT
TCTATAAGTTCAGAAAAAGGCGTATTATTTTTCTCCGGCTCGAACGCAGC
ATTCATACAAATACGCTCAGAAACAATAGCTTTTTCGACTGCGAGTCTTA
AATTCAGGTAATCTTTTTGATAAATTTTTCCCACTGAAATAAGCTCACAT
CATACACCCTCAAATATCACGACAGGACGACATCCGAAATGGCCGCTGGC
ACGGGTTCATCCCCCGGCCACACCGCGCGGCACGCCTGCGTGAAGCAGTC
ACTCCTCGTGATCTGCATGCCACGACCCCTTGCATTCATCTGAATGCTCG
TGTCGAACG back to topprotein sequence of EsuBft1323_2a-0001 >EsuBft1323_2 ID=EsuBft1323_2|Name=EsuBft1323_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=244bp
MEGKFEQTFTNIFVMFKKYVSLLEDQANKRIKGGGLELEVVEKLDRVLVE
LGRLAKMERAVWDEMLSTELMARCNVGRPNKGGRPAAVTGAPDKVWGSIS
VKTQRKCMHPGCKSKTSKGCACAELCVGKQAGDRLMSTELMARCNVGRPN
KGGRPAAVTGAPDKVWGSISVKTQRKCMHPGCKSKTSKGCACAELCVGKQ
AGDRGVLMCQACFKNPVRHARAGDAQRNPQKYGVVGRKDLVWWS back to topmRNA from alignment at Scaffold_106:41868..43226- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1323_2a-0001 ID=EsuBft1323_2a-0001|Name=EsuBft1323_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1359bp|location=Sequence derived from alignment at Scaffold_106:41868..43226- (Ectocarpus subulatus male Bft15b)
ATGGAGGGCAAGTTTGAGCAGACGTTCACCAACATTTTCGTGATGTTCAA
AAAGTACGTGTCCCTCTTGGAGGATCAGGCCAACAAGAGAATCAAGGGAG
GAGGCCTAGAGCTTGAGGTGGTGGAGAAGTTGGATAGGGTGTTGGTCGAA
CTGGGCAGGTTGGCCAAGATGGAGAGGGCGGTCTGGGACGAAATGTTGTC
GACGGAGCTCATGGCGAGGTGCAATGTTGGTAGACCGAACAAGGGGGGGA
GACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGGGAGCATTTCG
GTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGAGTAAGACATC
GAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAGGCAGGGGACC
GNCTGATGTCGACGGAGCTCATGGCCAGGTGCAATGTTGGAAGACCGAAC
AAGGGGGGGAGACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGG
GAGCATTTCGGTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGA
GTAAGACATCGAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAG
GCAGGGGACCGGGGTGTTTTGATGTGTCAGGCATGCTTCAAAAACCCTGT
GAGGCACGCTAGGGCTGGAGATGCTCAACGGAACCCCCAGAAGTACGGGG
TGGTGGGACGCAAGGACCTCGTCTGGTGGTCGTGAGCGCATATTTTTTTG
GCCTAATGTTTTACGTTGAATGTGACATGTGTTCCTGGCGGAGGAGACGC
CGATGTGTTTCGAGGGTGCTCCGTTGTGATTTGCCTGGGGGTCAAACTGA
TCTTACAAGTGCATAGTAGTGTCGTTCATCAACCATCTTCCCTTCCGCGA
GGGAGTTGTTGTGCCTTTATCGTCCACTTGTGTTTTCTTGAAAACAACCG
TGGACGAGTGATAGTTTTTGTGCCTTCGTCGTTTACCTGTGTTGCTGATA
ACAGCAGTGGTATAGCTTTTTTCAATTTTATTTGATCTTGTCTCCGATTT
TCTATAAGTTCAGAAAAAGGCGTATTATTTTTCTCCGGCTCGAACGCAGC
ATTCATACAAATACGCTCAGAAACAATAGCTTTTTCGACTGCGAGTCTTA
AATTCAGGTAATCTTTTTGATAAATTTTTCCCACTGAAATAAGCTCACAT
CATACACCCTCAAATATCACGACAGGACGACATCCGAAATGGCCGCTGGC
ACGGGTTCATCCCCCGGCCACACCGCGCGGCACGCCTGCGTGAAGCAGTC
ACTCCTCGTGATCTGCATGCCACGACCCCTTGCATTCATCTGAATGCTCG
TGTCGAACG back to topCoding sequence (CDS) from alignment at Scaffold_106:41868..43226- >EsuBft1323_2a-0001 ID=EsuBft1323_2a-0001|Name=EsuBft1323_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=735bp|location=Sequence derived from alignment at Scaffold_106:41868..43226- (Ectocarpus subulatus male Bft15b)
ATGGAGGGCAAGTTTGAGCAGACGTTCACCAACATTTTCGTGATGTTCAA
AAAGTACGTGTCCCTCTTGGAGGATCAGGCCAACAAGAGAATCAAGGGAG
GAGGCCTAGAGCTTGAGGTGGTGGAGAAGTTGGATAGGGTGTTGGTCGAA
CTGGGCAGGTTGGCCAAGATGGAGAGGGCGGTCTGGGACGAAATGTTGTC
GACGGAGCTCATGGCGAGGTGCAATGTTGGTAGACCGAACAAGGGGGGGA
GACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGGGAGCATTTCG
GTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGAGTAAGACATC
GAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAGGCAGGGGACC
GNCTGATGTCGACGGAGCTCATGGCCAGGTGCAATGTTGGAAGACCGAAC
AAGGGGGGGAGACCGGCGGCGGTGACGGGTGCCCCGGACAAAGTGTGGGG
GAGCATTTCGGTGAAGACTCAACGCAAATGCATGCACCCCGGATGCAAGA
GTAAGACATCGAAAGGATGTGCCTGCGCGGAGCTTTGTGTTGGCAAACAG
GCAGGGGACCGGGGTGTTTTGATGTGTCAGGCATGCTTCAAAAACCCTGT
GAGGCACGCTAGGGCTGGAGATGCTCAACGGAACCCCCAGAAGTACGGGG
TGGTGGGACGCAAGGACCTCGTCTGGTGGTCGTGA back to top
|