Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1319_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 235 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1319_2a-0001 ID=EsuBft1319_2a-0001|Name=EsuBft1319_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2353bp|location=Sequence derived from alignment at Scaffold_358:22697..26422- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCTCTCGTGGTCAATCTCGGCACTCGTGCCTGAACGGTAGACTGGCATCA
TCGGCAGAACATGAGCGATGAAGACAGCGGTGGGTCAAATGTTCGCGGCA
GACGGCCGTTCGTTCGTTGCGGGCAAGAACAGCGGGGGCAGGCAGGAGAC
TTACCGGTGCTCGGGCCATACCGTAGGCTGCAAAGCACAAGTCCGCGCCT
ACAAGGGTGCCGACGGAGTGTGGAAGGTGCACACGATTGACGCCGCACAC
ACCGACTGCTCCGGCGGCAATACGAAGGGGAGGACCGTTGCTCTCCAACA
CCTGGCCTCCACAGCCGTGAAGGACCATTCGTCCATGAATGGCAAGGAGC
TCAAGCGTAAGCTGGAGCGGAACACAGGGATCAATGTCGCCCACCGGACG
GCAAACCGGATGAAGATGACAGCAAGGGACGGCGACAAAGCGACGACGGC
GGCTGGGTACCAGCTGCTGGTTTTTTTCTGTGACCTTCTTCAACAGCAGT
GCCCTGGTTCGGTCGCGGAAACCCAGATTAACAATGGAATCATAGGGTCA
GAGAAAACTACCTGCATGTCTACGATTTCCTAGACAGCATATAGGGACAA
CTCTCGGGTGACAGGCTCAAAAGATCAGTATGGTAGCTGTCTTGTGTGTC
TCATATGTTATGTTGTGTAATTTCATGTCGTTAAATGTGCGAAGGGCAAG
GGAGAACATTTCTCATCATTGCCTCCTGATGACGTGGTCGCCGATAGAGG
CGTGTGGTTGATGAGGTTTCATAACCGACATGTGGGTGTGTGTTAAATGC
AGTGGGTGTGTTCACCTCTCTCGTCCGTGTGTAGGTAGGAGGTATGGCTA
CCTCTCCCATTTGTAGGCAGCGTGGACCATACTTGTAAATATAGTCTAGA
CAGAGTTCATCATTTCATGCATGTTACATCATTTGTGTTTGACAAGGGAG
GAATGAGAGGTTGTGCGTATGGGTACGGGGGTACTCCCTGTGTCCGTGTT
GTTCCCAGATGTTGCCGCATCAAGTGGCAGCATGTGTCATGGACAGGTAG
ACGTGGAAGGACGGCGACAGGTGAACGGCAGCAGTAGTATGTTGTGCATG
GTGGCATGTTGGGCTTGTGCAGAGGCGCAGTCCATCTTCGACCACACACA
AAAAAGTTTGCTCGTACCTGTGGGGATTTTTCGAAGTCCTGGGTCAGCCA
AGAGCAGCAGCAAGGAGCAAACGCAGTGCAGTATACTCCACAGCTTTACA
GTCCGTCCTCCTCAAGTCCTATCGGAGATGATTAATATCGCACAACGGCT
GGATCCGAAATGCCGGCTAGCTCCGCAATCCAAGAGAGGTGGGTGGCTGA
GCTAAAACCGGAATGACTGCATGCGTGCTCCTCTCAGCGACGTCGCTGGC
TGGCTCTTTGAAGTGCAGATTTCTGGTTCAGCGGAATTTGATTCCCAATT
CTTCGTTGTCACCTGGGTGTATGGGAATTTTTGAGAAAGGTGTACAGAAA
TTGATTATCCTAATTGCAAGGGACACGTTTCTTTTTCAGTGTTCCCCCTT
GCGGTTTCGACGGTTAAATATGCGGTTACCCACAGATTTTCGCATCGCTA
TAAGCTATCAGGCTCCTACAAAAGTATGCGTGTACAATTTTGGTAGCGCT
AGAAGCAATTTGAACATGATTGTTATGTCATTATTTATAAACAGGCGTTC
TTATTTTGCACATAGACATGTAACGATATTTGAACATAACACAACAACAC
TACTCCAGGAATTGCTCAACAAAGAAACGGGACACTACCCAATAAAGGAA
AAGATAATCGCACGCAGGCTAATCTACCAAAAAGTCATTCGTATCTACTC
GATTCCAAATACCCAACTCCACTTTCTTCCAGTATGAATTCCGCACCATA
GGTGCATTTACACCCACGATGTTTGCAGTCACTGGCGAGGTACGAAAAAA
GGTATACATGAAATTGTGTAAAGTATTACGTATAAGTCGACTAGAATAGA
AACGTGCAAGCATGTCAGCTATCAATCTGGCTGTGGCAGCTTGGAAAAAT
CGAATGTCAGTACATCTAATAGCAAATCGGCACATTTGACAGTGTAACGT
CGACATCTTACACCTAGTAGATAACACTGTTTCCCAATGTGGGAATGCCC
GATATTGCTTCAGCGTAGCCATATGTTGGCGCTTATTATACATACCGATA
CAAGTCTTACCAGGAATGTCTTGCCCTATTTGCATATCCAGAAAGTGTGC
TGATTCCCTACACTGTTCTTGGGTAACGCGAACGGGGTTGTCTATCTCAT
CACCATTCGAATCTATCACCATCGTTGGGTACATACCACCATATTGATTA
CCC back to topprotein sequence of EsuBft1319_2a-0001 >EsuBft1319_2 ID=EsuBft1319_2|Name=EsuBft1319_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=171bp
MKTAVGQMFAADGRSFVAGKNSGGRQETYRCSGHTVGCKAQVRAYKGADG
VWKVHTIDAAHTDCSGGNTKGRTVALQHLASTAVKDHSSMNGKELKRKLE
RNTGINVAHRTANRMKMTARDGDKATTAAGYQLLVFFCDLLQQQCPGSVA
ETQINNGIIGSEKTTCMSTIS back to topmRNA from alignment at Scaffold_358:22697..26422- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1319_2a-0001 ID=EsuBft1319_2a-0001|Name=EsuBft1319_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3726bp|location=Sequence derived from alignment at Scaffold_358:22697..26422- (Ectocarpus subulatus male Bft15b)
TCTCTCGTGGTCAATCTCGGCACTCGTGCCTGAACGGTAGACTGGCATCA
TCGGCAGAACATGAGCGATGAAGTAGTGAACACCGCGGTCCTCGCGCAAG
GCGCGTGCTACTTCACCACCAGCCATGTTAGGACAGCGGTGGGTCAAATG
TTCGCGGCAGACGGCCGTTCGTTCGTTGCGGGCAAGAACAGCGGGGGCAG
GCAGGAGACTTACCGGTGCTCGGGCCATACCGTAGGCTGCAAAGCACAAG
TCCGCGCCTACAAGGGTGCCGACGGAGTGTGGAAGGTGCACACGATTGAC
GCCGCACACACCGACTGCTCCGGCGGCAATACGAAGGGGAGGACCGTTGC
TCTCCAACACCTGGCCTCCACAGCCGTGAAGGACCATTCGTCCATGAATG
GCAAGGAGCTCAAGCGTAAGCTGGAGCGGAACACAGGGATCAATGTCGCC
CACCGGACGGCAAACCGGATGAAGATGACAGCAAGGGACGGCGACAAAGC
GACGACGGCGGCTGGGTACCAGCTGCTGGTTTTTTTCTGTGACCTTCTTC
AACAGCAGTGCCCTGGTTCGGTCGCGGAAACCCAGGTGAGAGATGTTTTC
TCTCGACTCGTGGTCTGCGCATGCAGCAAAATGTGTGGCTAGGACCTTGC
TGATGCAACCGTGTGGTGTGTGGTGTCCACGGGCGACCGGTGTTGATGAT
ATGGCCACTACATGATGTACTTCAAAGAGCATAGCTCTCAACAGCACAGC
CCTCAACAGCACAGCTCTCAACAACAGCAGTAGCAGGGTAGTCTGTCTGC
AGCAGTGTGCAGTCTGCCTGTGTGTTCAGCGCCGATTGTTGGCGACCCCT
TCGTTTCCTTCCGTCCTCGCTGTACATACACCAGCGTTAGCTTGGAAGGT
ACCACACCGAGCCCAATTCGAAGCTCAACTACTCCACGACGAAGCGGGTT
GCCACCAGAAGATTCTGTCGCTCAGCCATTTTGATGACTCTTGATTGATT
ATGTCATGTCGATTGATGTCGATTGCATCGATTGCATTGTAATCTCCCCT
GATGATCGGTCAGGGGGGTCAGTGTCTTGTGCGACATAGATAGGGTGTAG
TATCTTCTGCCACATAGGTACCGTCCGTGTGTACTACATACAACAACACG
TGTGTGCTGCTGCTGCTCTGTTAATTTTGTTTGAAGTATGAAGCGTTGAT
GCCGGCCGTATGGTTCCCTCCCCTCACAGGTCAAATGCTGCTGTGCACTT
GGAACGACTTACCGTATATGACACCAGATAACACACCCCCTTGACCATTT
TTCGAAGCTCGATTTCTCAAGTGAAGTAACAGTCATAGCGCCGAAAACGG
CGGCGTTGGAACCGTCTCATCGAGAGCTTTTCGAAAATGTATCGTTTCGT
TCATGCATCCCCTTCGTCGTGGAGTAATCGAGCTTTGAAAATCGGTCCAG
GTGGTGTGTTATCTTGTGTCATATACGGTAATCTTGTTTTCATAGAAGAT
ATCATCAGAAGAACGCTATGTGTTTTATCCCCAACTATTTTTACTCCCTC
CCAAGTTTTAGACTCCTAATTTTATGTCCAAGTATCAAAGAGGTTCAAGG
AAAGCGACCCGAATAGGCTTGTAGATTTGGAACGGGCTGGTGCTTCGCTC
TCTGTCGCTACACCTCTGTCTTTCCTCTCTAGCCGCCTGCCCCCGCCTCG
CCTGTAGCTGGCTATCATCTCCCCATCTTCGTACCATTTGGTCTCGTATG
ATGCAAACGTGTTTTCAATTTTGTGGGCATTGTCTCTGTTTGTCGTTTGC
TGTCCTTCTCGTATGCTTCGCGCCAACACTGCATTTTTTTTTTTTTTCTT
AATATGACACAACGAGTCCATCTCTATCATAGAAAAGAGTCAGAGGCAGA
TTAACAATGGAATCATAGGGTCAGAGAAAACTACCTGCATGTCTACGATT
TCCTAGACAGCATATAGGGACAACTCTCGGGTGACAGGCTCAAAAGATCA
GTATGGTAGCTGTCTTGTGTGTCTCATATGTTATGTTGTGTAATTTCATG
TCGTTAAATGTGCGAAGGGCAAGGGAGAACATTTCTCATCATTGCCTCCT
GATGACGTGGTCGCCGATAGAGGCGTGTGGTTGATGAGGTTTCATAACCG
ACATGTGGGTGTGTGTTAAATGCAGTGGGTGTGTTCACCTCTCTCGTCCG
TGTGTAGGTAGGAGGTATGGCTACCTCTCCCATTTGTAGGCAGCGTGGAC
CATACTTGTAAATATAGTCTAGACAGAGTTCATCATTTCATGCATGTTAC
ATCATTTGTGTTTGACAAGGGAGGAATGAGAGGTTGTGCGTATGGGTACG
GGGGTACTCCCTGTGTCCGTGTTGTTCCCAGATGTTGCCGCATCAAGTGG
CAGCATGTGTCATGGACAGGTAGACGTGGAAGGACGGCGACAGGTGAACG
GCAGCAGTAGTATGTTGTGCATGGTGGCATGTTGGGCTTGTGCAGAGGCG
CAGTCCATCTTCGACCACACACAAAAAAGTTTGCTCGTACCTGTGGGGAT
TTTTCGAAGTCCTGGGTCAGCCAAGAGCAGCAGCAAGGAGCAAACGCAGT
GCAGTATACTCCACAGCTTTACAGTCCGTCCTCCTCAAGTCCTATCGGAG
ATGATTAATATCGCACAACGGCTGGATCCGAAATGCCGGCTAGCTCCGCA
ATCCAAGAGAGGTGGGTGGCTGAGCTAAAACCGGAATGACTGCATGCGTG
CTCCTCTCAGCGACGTCGCTGGCTGGCTCTTTGAAGTGCAGATTTCTGGT
TCAGCGGAATTTGATTCCCAATTCTTCGTTGTCACCTGGGTGTATGGGAA
TTTTTGAGAAAGGTGTACAGAAATTGATTATCCTAATTGCAAGGGACACG
TTTCTTTTTCAGTGTTCCCCCTTGCGGTTTCGACGGTTAAATATGCGGTT
ACCCACAGATTTTCGCATCGCTATAAGCTATCAGGCTCCTACAAAAGTAT
GCGTGTACAATTTTGGTAGCGCTAGAAGCAATTTGAACATGATTGTTATG
TCATTATTTATAAACAGGCGTTCTTATTTTGCACATAGACATGTAACGAT
ATTTGAACATAACACAACAACACTACTCCAGGAATTGCTCAACAAAGAAA
CGGGACACTACCCAATAAAGGAAAAGATAATCGCACGCAGGCTAATCTAC
CAAAAAGTCATTCGTATCTACTCGATTCCAAATACCCAACTCCACTTTCT
TCCAGTATGAATTCCGCACCATAGGTGCATTTACACCCACGATGTTTGCA
GTCACTGGCGAGGTACGAAAAAAGGTATACATGAAATTGTGTAAAGTATT
ACGTATAAGTCGACTAGAATAGAAACGTGCAAGCATGTCAGCTATCAATC
TGGCTGTGGCAGCTTGGAAAAATCGAATGTCAGTACATCTAATAGCAAAT
CGGCACATTTGACAGTGTAACGTCGACATCTTACACCTAGTAGATAACAC
TGTTTCCCAATGTGGGAATGCCCGATATTGCTTCAGCGTAGCCATATGTT
GGCGCTTATTATACATACCGATACAAGTCTTACCAGGAATGTCTTGCCCT
ATTTGCATATCCAGAAAGTGTGCTGATTCCCTACACTGTTCTTGGGTAAC
GCGAACGGGGTTGTCTATCTCATCACCATTCGAATCTATCACCATCGTTG
GGTACATACCACCATATTGATTACCC back to topCoding sequence (CDS) from alignment at Scaffold_358:22697..26422- >EsuBft1319_2a-0001 ID=EsuBft1319_2a-0001|Name=EsuBft1319_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=516bp|location=Sequence derived from alignment at Scaffold_358:22697..26422- (Ectocarpus subulatus male Bft15b)
ATGAAGACAGCGGTGGGTCAAATGTTCGCGGCAGACGGCCGTTCGTTCGT
TGCGGGCAAGAACAGCGGGGGCAGGCAGGAGACTTACCGGTGCTCGGGCC
ATACCGTAGGCTGCAAAGCACAAGTCCGCGCCTACAAGGGTGCCGACGGA
GTGTGGAAGGTGCACACGATTGACGCCGCACACACCGACTGCTCCGGCGG
CAATACGAAGGGGAGGACCGTTGCTCTCCAACACCTGGCCTCCACAGCCG
TGAAGGACCATTCGTCCATGAATGGCAAGGAGCTCAAGCGTAAGCTGGAG
CGGAACACAGGGATCAATGTCGCCCACCGGACGGCAAACCGGATGAAGAT
GACAGCAAGGGACGGCGACAAAGCGACGACGGCGGCTGGGTACCAGCTGC
TGGTTTTTTTCTGTGACCTTCTTCAACAGCAGTGCCCTGGTTCGGTCGCG
GAAACCCAGATTAACAATGGAATCATAGGGTCAGAGAAAACTACCTGCAT
GTCTACGATTTCCTAG back to top
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