Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1311_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 84 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1311_6a-0001 ID=EsuBft1311_6a-0001|Name=EsuBft1311_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=844bp|location=Sequence derived from alignment at Scaffold_589:137828..139488+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGATACGAAGGATTGTTGAGGCGACCCATGCTCGTGGATGCAACGGCTCA
AGCCCTGCTCAACGAGGCGGACAGCGCGGACGGTGGGACCAGGGGGTCGA
CCATAAAAACCTGCGCCAACAATGCTTGCTATTTCAACGCCGTTGCGTTG
GGGGGGTTTGGCGCCAGCACTCCTGAGGTCTTGACAGAGAGCGTAGCGCG
AGTTCTGTACCTGCTTGCCGTGCGAGAGGTCGCTGGCGAGTTCAGCGACA
GCCAACAGGCGGCCATACCGTGGACAGCACAAGCGTTTGGGGTGAAGATG
CGGTGCTTTCACCCAGGTGGGTCGATGAAGGATGTTGAGGGTGGGGCGTC
GTTCGCCGGGAAATGGAGCAAGGAATTGATCGGTCCGCTCAACCCCTCTG
GGGTTGAGCCAACCATCTACCTCACGATGTCCATCACGTCTCACAAGCAC
GCGTTCAGCAGCATCCACGAGTTCACGGAGACAACTCGCCGCTGGGAACG
CGGCGCCGATGGCGAACTCCACCAAATGCGATGGATGCCTGATTTCAATC
ACTGGGTGCTCATGTTGCCCCCGGCAAACGCAGGTGCCCTTCAGGCCTTT
TCCCGGAGTTAGCTGCGAGAAAGTCTTCCGGGAAGGACTCCAAGCTTGCG
TCAAGGTTGGTATCCGCTGGACGCCTGCATCGACAACAACAGAATACAAG
AAATCAGCGATCGCGCACATGATACGGGAAAAAAATAATCATGCGCGAAC
ATGGTGTTGCCGTTTCGCCAAACGCGTGAGAATCTCCCTCTTCAACAAAG
ACATCCACTGTGGGAGAAGAAAGACCCCCATACGTGCTATAAGG back to topprotein sequence of EsuBft1311_6a-0001 >EsuBft1311_6 ID=EsuBft1311_6|Name=EsuBft1311_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=194bp
MLVDATAQALLNEADSADGGTRGSTIKTCANNACYFNAVALGGFGASTPE
VLTESVARVLYLLAVREVAGEFSDSQQAAIPWTAQAFGVKMRCFHPGGSM
KDVEGGASFAGKWSKELIGPLNPSGVEPTIYLTMSITSHKHAFSSIHEFT
ETTRRWERGADGELHQMRWMPDFNHWVLMLPPANAGALQAFSRS back to topmRNA from alignment at Scaffold_589:137828..139488+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1311_6a-0001 ID=EsuBft1311_6a-0001|Name=EsuBft1311_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1661bp|location=Sequence derived from alignment at Scaffold_589:137828..139488+ (Ectocarpus subulatus male Bft15b)
GGATACGAAGGATTGTTGAGGCGACCCATGCTCGTGGATGCAACGGCTCA
AGCCCTGCTCAACGAGGCGGACAGCGCGGACGGTGGGACCAGGGGGTCGA
CCATAAAAACCTGCGCCAACAATGCTTGCTATTTCAACGCCGTTGCGTTG
GGGGGGTTTGGCGCCAGGTACAAAACCCCTGACGAAGCGCTGGAGCTTTC
TCTGTCGGTGCGTGTAGCCGTAATTCGAGCGGCCCTAGTACATTTGCAGA
CATTATTCATCAGCGGTCCTGGGTACGGTGGCTTCTACTGTACGCTGAAG
GCGTATTCCGCGCGCTTGGAGGCTCGGGTGCAGCACTCCTGAGGTCTTGA
CAGAGAGCGTAGCGCGAGTTCTGTACCTGCTTGCCGTGCGAGAGGTCGCT
GGCGAGTTCAGCGACAGCCAACAGGCGGCCATACCGTGGACAGCACAAGC
GTTTGGGGTGAAGATGCGGTGCTTTCACCCAGGTGAGTTGGTTTGTATTC
AGGATGATTTCCCCGTAAGATAGAAGACGGCAAACTTGCAAAGCTAAATC
GGTATGAGGGCTCCCGCTCTCGTTAGGTCTCCACCTGTCACGATTAACCC
GGACAACCCCCTTCCACCACCCCCAGGACAGGATTATCTCTCTTGTGGTA
CAGGGACGCTTCGGATAAGTGCTTGTCACCTTCATTTAGTATCCTTATAT
CCCAATAGCTTGTGCAAATGAGGGCGATCCTTTGATAACGTTGCTCACAC
ATTATGTCACTGGGCAGGTGGGTCGATGAAGGATGTTGAGGGTGGGGCGT
CGTTCGCCGGGAAATGGAGCAAGGAATTGATCGGTCCGCTCAACCCCTCT
GGGGTTGAGCCAACCATCTACCTCACGATGTCCATCACGTCTCACAAGCA
CGCGTTCAGCAGCATCCACGAGTTCACGGAGACAACTCGCCGCTGGGAAC
GCGGCGCCGATGGCGAACTCCACCAAATGCGATGGATGCCTGATTTCAAT
CACTGGGTGCTCATGTTGCCCCCGGCAAACGCAGGTGCCCTTCAGGTGAG
ACAGACAGGACGCCGGGTGTCCGGACGCCGGGTGTGTTGTTGCTCATTGT
GGGGCGCAAAAGACGTACGGAGCTTTGTGAAGTGTTCATTCTTTTGACCC
CTCGGCCGCAGTTCATTTCCTGAGTATACCACACACCCCAGAATTCGCCC
ATCTTCGCATTGTTCGCACGCGTGTATTTCGCTCTGCGCAGAAACACACA
AACAGACGGGGGGTTCGTTTTCAGCCAACCGCCCCGGTCGGCGCAAGGTT
CCAGAAAAGAAAGTGGCATTTTGAACGCCACCCCTTTCGTCGCCAACGAC
ATGGCGGCCTTGACAAAAGTCAGAGCATTGTTGTATGGAGGGCTCGTCAC
CACCCACTCAGGCCTTTTCCCGGAGTTAGCTGCGAGAAAGTCTTCCGGGA
AGGACTCCAAGCTTGCGTCAAGGTTGGTATCCGCTGGACGCCTGCATCGA
CAACAACAGAATACAAGAAATCAGCGATCGCGCACATGATACGGGAAAAA
AATAATCATGCGCGAACATGGTGTTGCCGTTTCGCCAAACGCGTGAGAAT
CTCCCTCTTCAACAAAGACATCCACTGTGGGAGAAGAAAGACCCCCATAC
GTGCTATAAGG back to topCoding sequence (CDS) from alignment at Scaffold_589:137828..139488+ >EsuBft1311_6a-0001 ID=EsuBft1311_6a-0001|Name=EsuBft1311_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=585bp|location=Sequence derived from alignment at Scaffold_589:137828..139488+ (Ectocarpus subulatus male Bft15b)
ATGCTCGTGGATGCAACGGCTCAAGCCCTGCTCAACGAGGCGGACAGCGC
GGACGGTGGGACCAGGGGGTCGACCATAAAAACCTGCGCCAACAATGCTT
GCTATTTCAACGCCGTTGCGTTGGGGGGGTTTGGCGCCAGCACTCCTGAG
GTCTTGACAGAGAGCGTAGCGCGAGTTCTGTACCTGCTTGCCGTGCGAGA
GGTCGCTGGCGAGTTCAGCGACAGCCAACAGGCGGCCATACCGTGGACAG
CACAAGCGTTTGGGGTGAAGATGCGGTGCTTTCACCCAGGTGGGTCGATG
AAGGATGTTGAGGGTGGGGCGTCGTTCGCCGGGAAATGGAGCAAGGAATT
GATCGGTCCGCTCAACCCCTCTGGGGTTGAGCCAACCATCTACCTCACGA
TGTCCATCACGTCTCACAAGCACGCGTTCAGCAGCATCCACGAGTTCACG
GAGACAACTCGCCGCTGGGAACGCGGCGCCGATGGCGAACTCCACCAAAT
GCGATGGATGCCTGATTTCAATCACTGGGTGCTCATGTTGCCCCCGGCAA
ACGCAGGTGCCCTTCAGGCCTTTTCCCGGAGTTAG back to top
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