Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1311_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 100 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1311_10a-0001 ID=EsuBft1311_10a-0001|Name=EsuBft1311_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1005bp|location=Sequence derived from alignment at Scaffold_589:172902..173906+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCCTGTTCGTGTCTGCTGTCCTTAATACAAGTGATACCATCATCTTCAA
CACAGATACAGGGAATACGAACACTCTAGAGTGTATCCCTCGAAGGAACC
CGTGCTGGAGATGAATGGCGCCGATGTTGCAGCAGAGGCTGCCGACGTCA
CCACTAGTACGCAGGGCAGAGTTGACAACCTAGAGAGAAAAGTTACAGGC
CTGACGGACGAGGCACAGCAGCTGCCAGGGCCTCACCGCGGCGCCCTCGG
AAAGTTTGAGAATGAGGGGGAGTCCGGCGGCGCTGGGGTGGGCGCTGTCA
TCATGGGCACTACGTCTGCCCGCGGTCTGCTGGAAGAGGGGCCGCACAAC
GACGGAATCACGCCGCCCGCACAGCACGGGGGAAGAAGCACCAGACCGGG
AGCCAGGCTGGTACTGCCAAGGATCCCTGCTGGAGTGGACCCGGGCATTG
GACCGGGCAGCGGGGAGGTCATGGGGTCATCATCCCAAGAGCAGCCTGCT
GCGGTGGGCGCTTACATAGACTACACGGCTGCAGAAGAGACCATCAGCAG
TAGACCGGTTGCGGAAGGCGAACCGGTGTGGGCATTTCAGGTCCCTGCTA
ACGGTGGGTTTGGTAGATTCCAGAACACCGAATACCTCAAGATAGGCAGC
GATGGTAGAGATGCAGCTGCCGCTCGAGGCACTGGCCGAAGGGTCAGAGC
AACGTACTCATCACGTCGAGAAGAGCTGTGCGGTGCTGGAGGGGGTGCCG
CAGACGGCACACCAAGTGTGCCTGTTGACCGCGGGAAAGTACTTGCGTCT
CGAGAGCTGGGGCATCATGCATCCCCGCGACGCCGTCGGTGTGCCATCAA
AACAACCAGCGCAGGCCACTGCGCGCGCACCATCCACACACAGCAGCAGC
AGCAGCAGGAGATGGTGAAGATGGCACCATTACAGCAGCGTGGAAGGGTC
AAGACACAGAAAGCCGGCCGCAAGGCCATGTGCCCATAGCCGCGACGGGA
GGGGC back to topprotein sequence of EsuBft1311_10a-0001 >EsuBft1311_10 ID=EsuBft1311_10|Name=EsuBft1311_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=292bp
MNGADVAAEAADVTTSTQGRVDNLERKVTGLTDEAQQLPGPHRGALGKFE
NEGESGGAGVGAVIMGTTSARGLLEEGPHNDGITPPAQHGGRSTRPGARL
VLPRIPAGVDPGIGPGSGEVMGSSSQEQPAAVGAYIDYTAAEETISSRPV
AEGEPVWAFQVPANGGFGRFQNTEYLKIGSDGRDAAAARGTGRRVRATYS
SRREELCGAGGGAADGTPSVPVDRGKVLASRELGHHASPRRRRCAIKTTS
AGHCARTIHTQQQQQQEMVKMAPLQQRGRVKTQKAGRKAMCP back to topmRNA from alignment at Scaffold_589:172902..173906+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1311_10a-0001 ID=EsuBft1311_10a-0001|Name=EsuBft1311_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1005bp|location=Sequence derived from alignment at Scaffold_589:172902..173906+ (Ectocarpus subulatus male Bft15b)
GTCCTGTTCGTGTCTGCTGTCCTTAATACAAGTGATACCATCATCTTCAA
CACAGATACAGGGAATACGAACACTCTAGAGTGTATCCCTCGAAGGAACC
CGTGCTGGAGATGAATGGCGCCGATGTTGCAGCAGAGGCTGCCGACGTCA
CCACTAGTACGCAGGGCAGAGTTGACAACCTAGAGAGAAAAGTTACAGGC
CTGACGGACGAGGCACAGCAGCTGCCAGGGCCTCACCGCGGCGCCCTCGG
AAAGTTTGAGAATGAGGGGGAGTCCGGCGGCGCTGGGGTGGGCGCTGTCA
TCATGGGCACTACGTCTGCCCGCGGTCTGCTGGAAGAGGGGCCGCACAAC
GACGGAATCACGCCGCCCGCACAGCACGGGGGAAGAAGCACCAGACCGGG
AGCCAGGCTGGTACTGCCAAGGATCCCTGCTGGAGTGGACCCGGGCATTG
GACCGGGCAGCGGGGAGGTCATGGGGTCATCATCCCAAGAGCAGCCTGCT
GCGGTGGGCGCTTACATAGACTACACGGCTGCAGAAGAGACCATCAGCAG
TAGACCGGTTGCGGAAGGCGAACCGGTGTGGGCATTTCAGGTCCCTGCTA
ACGGTGGGTTTGGTAGATTCCAGAACACCGAATACCTCAAGATAGGCAGC
GATGGTAGAGATGCAGCTGCCGCTCGAGGCACTGGCCGAAGGGTCAGAGC
AACGTACTCATCACGTCGAGAAGAGCTGTGCGGTGCTGGAGGGGGTGCCG
CAGACGGCACACCAAGTGTGCCTGTTGACCGCGGGAAAGTACTTGCGTCT
CGAGAGCTGGGGCATCATGCATCCCCGCGACGCCGTCGGTGTGCCATCAA
AACAACCAGCGCAGGCCACTGCGCGCGCACCATCCACACACAGCAGCAGC
AGCAGCAGGAGATGGTGAAGATGGCACCATTACAGCAGCGTGGAAGGGTC
AAGACACAGAAAGCCGGCCGCAAGGCCATGTGCCCATAGCCGCGACGGGA
GGGGC back to topCoding sequence (CDS) from alignment at Scaffold_589:172902..173906+ >EsuBft1311_10a-0001 ID=EsuBft1311_10a-0001|Name=EsuBft1311_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=879bp|location=Sequence derived from alignment at Scaffold_589:172902..173906+ (Ectocarpus subulatus male Bft15b)
ATGAATGGCGCCGATGTTGCAGCAGAGGCTGCCGACGTCACCACTAGTAC
GCAGGGCAGAGTTGACAACCTAGAGAGAAAAGTTACAGGCCTGACGGACG
AGGCACAGCAGCTGCCAGGGCCTCACCGCGGCGCCCTCGGAAAGTTTGAG
AATGAGGGGGAGTCCGGCGGCGCTGGGGTGGGCGCTGTCATCATGGGCAC
TACGTCTGCCCGCGGTCTGCTGGAAGAGGGGCCGCACAACGACGGAATCA
CGCCGCCCGCACAGCACGGGGGAAGAAGCACCAGACCGGGAGCCAGGCTG
GTACTGCCAAGGATCCCTGCTGGAGTGGACCCGGGCATTGGACCGGGCAG
CGGGGAGGTCATGGGGTCATCATCCCAAGAGCAGCCTGCTGCGGTGGGCG
CTTACATAGACTACACGGCTGCAGAAGAGACCATCAGCAGTAGACCGGTT
GCGGAAGGCGAACCGGTGTGGGCATTTCAGGTCCCTGCTAACGGTGGGTT
TGGTAGATTCCAGAACACCGAATACCTCAAGATAGGCAGCGATGGTAGAG
ATGCAGCTGCCGCTCGAGGCACTGGCCGAAGGGTCAGAGCAACGTACTCA
TCACGTCGAGAAGAGCTGTGCGGTGCTGGAGGGGGTGCCGCAGACGGCAC
ACCAAGTGTGCCTGTTGACCGCGGGAAAGTACTTGCGTCTCGAGAGCTGG
GGCATCATGCATCCCCGCGACGCCGTCGGTGTGCCATCAAAACAACCAGC
GCAGGCCACTGCGCGCGCACCATCCACACACAGCAGCAGCAGCAGCAGGA
GATGGTGAAGATGGCACCATTACAGCAGCGTGGAAGGGTCAAGACACAGA
AAGCCGGCCGCAAGGCCATGTGCCCATAG back to top
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