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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1274_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 330 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1274_4a-0001 ID=EsuBft1274_4a-0001|Name=EsuBft1274_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3302bp|location=Sequence derived from alignment at Scaffold_390:380341..385001+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CAGCGGCAGCAGCAGACATCAGCGCACCCCCAACGACCTCTGCCTCCTCG ACGGCGACCCCCTCTCCACCTCCGGGCGACATTCCTCCAGCTAGTGGCGC CCCTCTTCGTCTCTTCCACACAAGTAGTGTGAAACCTCTAGGCGAGTCTG ATTCTGTGACTGGAAATGAGATCGGAGTTGTTAGTGATGGGGAGGTGTCT GGTGTTCCCGTTGCTGGTATGTCTGTGCTTGATGTTCCTGTTGTTCCTGC AGTGAATCCTGCTATAACCTCTCAAGCTCCGGTATCCCACACTAGGATGT CAACACCCAAAGGTGGTGAGCAGTTGCAGGAAGATAAGGGGACGAGTGCG GGGATGTTTGATGCGAGGGAAGGAGTTGCGTTTGAGCATGATGTGGCTGT GTTGGGTCGTGCCGAACAAATGGATGTTGACGTTTTCCACCACCGCGCTG GCCACTTTCCCGAACCCATTTTGAGTATGACTGCCGAGCAACAAGGGAAC ACCCTTCCCAGGGAGTTGGAACCCGGGAACACTGCCGCTTCGCCGCCCTC TGCCAACGCTGCCACTTGGCCTGCCGTCGCCGCCGCCACGGCGGGGACCA TCACCGCTTCGCCGCCCGCTGCTGCCGCTGTACCGTGGGGACCCGCCACT GCCGACGCTACGTCATCGTCGCCGTCGCACACCGCTGGTGGCGCACCATG GAATGCAGCCGCCGCCACCGACGCACCGTCGCCGCTGCCGCCAACCTCCG GGACCGCGTTACCCGCCACTGTCACCGCGGCCGCGCCGTCGCGGCTGCCG CCGACCTCCGGGGCCGCCGTGCCGCTTGTGCCTTCGCCAGGTGCCACCGC GCTGCCGCGCCCGAGGACGACCGCGACGAGGACCACCGACGTGGCCGCCG CCGCTTCGTCATCGCCGCAGCATACCACCGCAGGTGGGACACAGATTCAT CCAGCCGCCACCGTCGTCCCCGCGTCGTCGCCGACATCGCCTTACTCGGG GCATGCATCGCCACAGGCGGACTGGTTGTCTTCTCCTATTGAGGCCGCTG CTCCATCTTCGACGGCGCGTGATGCACGGCAAGCCGATGGTTAGGCATGG GTTGCTGGGGTCCGGTGGGGGTCGATACCGGTGGAAATGATGAGTGGAGA ATGAGTGGTCGGTCGACCCCGCGTGGCACGCNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGAAGCTGCTGATGAGACCTTCAATTTGCAC CGCTTCTTGGAATAGCCCGTCCCCTACTTGCCAAGAAATGGCAAGAGGCG TCTGGACCCGAAATTTCAATTTTTTTGGCTCTCGCTCTCAATCAGATACT TCGCTCTCAATCAGGCGAATATGTTGTTGATTCGAGATGGCATGAACAGC AATCGAGTTGTTTCTGTTTCCATATGAATACCTGCTTAGCAAACGGACTG TTGACGTATTGATAATAACGGAGTGTTCTTTCATGGACTCTGGAAATATC AGAGGCGTGTTTTGGGATGTGACAGAAGGGAGGCTGGTTGCATGGTTGAT TGATTTTATACCATTGAACAGCAACGGCGACACCGCTTCGCAAGTACGCG CTGCGTAGTAATTGGTCCTTGGAAACTGTAGTGGAGGAATGATTTGGCAT GTTTTGATTGATGAGTACGTGTTGATTTGTCTTCGTGTGGCGGTTTTCTT GGTAGAAGGCTTTCCGTTATCTCCTGTGTTTTTGACGCGCCTTTCCATGT ACCATCGGTCAGGGATAAACCCGTTCTCTCTGTTTTCGATGCTGTCGGCA ATTATCATGGGGAGGGAGAATAGGTTGTGTCATAAGAATTGCCACAGCAT CACGAACAAATGAATGCTTTGTTTTTTTTTACTATGCCCGATTTGCAAAG TCCGGGATTTGATTGCGTGAATGGCAATGCAAGTTTTTATGCGATTTTAT TTGGTGTGCTTTCCGTACCCAAATGTCACAGGATGCGTTTGTCAAGTAGA TGGTTGATCCCTTAACGTCTGGCGTTCGGAGCAGGGGGGCCGTAACCAGA CTGCATTGGTAGGGTACGCAGGAAGGAAATCTATTGCTCTGTTGTCGAAG GATGTATTTGTCAAGTAGAGGGTTAATCGCTTAATGTCTGATGTTCGGAG TAGGGGGGCCGTAGCCAGACAACATGTTTTTGTAGGGTATGCAGGAAGGA AAATTGTTGTTCTGTTGGAAATTGAAGAGAGGTTATTCACAGAATGTGGC GTCCTGCAGCAGCGGAGGTGGCGGTGCTGTCGTAGCTCGTAGACTTTGTA GTCTACCACAGAGGTTGGTCTACACTGCTGTGAGATCGGTAGGCCCGAGC GAGCTCTGGAAAGAGAAATGTAGATGGATTTTCTTATCAACTGACTCCCT GGTCAGGCTTTGATGGGTGCTAGATGAGAGTGAGCACAAGGGGCGAAGGC GCGCTTGTGTCTCATCTCAACAACAAAACAAAAACAAGAAACAAGCAGCA AAAACACAGCAGGTTCCGAGGGTCTCCGGAGTAATGGCCCGAGTACCGGA ATTTCGGGGTTCGGAACAATAAAACAACTACAGTCNGTTGGCGTTCGGTA TTGTCGAGGTCCTCTGTGTTGGTTGGTATCTTGATGGCATTGTTTTGGAC ATCGGATTCAAGATTGACCGATACAAAATACTTGCTGCAGCAGTGTTTTT GGTTCTATGGTCGGTTGGGTTTTCGTGATGGTCGTTGAGTATTGAAGTCA AGACCGGCCGATAGGAAGTACTTCAGAGTTTTTGGTTTAATGGTCGGTTG GATTATCGTGATATGCTTTTTGACATTAAATTACAGGTTGACCGATAGGA GATACTTTCAAGTGTTTTTGGTGTAATGCTCGGTTGGATTTTCTTGATGT TCGTTGAATGTTGAGTTGAAGACTGGCCGATAGGAAATACTTTGATGTGG TCTTGTAGGTTCAATGGTCTTCGTGTTGTTTTGAGGATGATGCACGGAGT AGAAGAAGAGCATTTATTTTTGCAATCATGATGATAATTTGATATTGGGG ATTTCGAATTCATGAGCAACCGATGGATTCTTGGTTGTGTTCCTGGCTTA ATGGTTTGCAACCGATGGAATGTCGATCAGTGTATCTGGTTTGATGGTTT TTCATGAATGTTTTGATCTTCGGAGATTCCGGATACAATGGAGACCGATG GAGATTCTGGTTGTGTTTCTGGGTGAATGGATTATTTTCGTTGCAAGAGA AATAGGAGGAGATACGACTCTTCTTGCACATTGACATTGATTTCTGGAGT GT back to topprotein sequence of EsuBft1274_4a-0001 >EsuBft1274_4 ID=EsuBft1274_4|Name=EsuBft1274_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=291bp
MSVLDVPVVPAVNPAITSQAPVSHTRMSTPKGGEQLQEDKGTSAGMFDAR EGVAFEHDVAVLGRAEQMDVDVFHHRAGHFPEPILSMTAEQQGNTLPREL EPGNTAASPPSANAATWPAVAAATAGTITASPPAAAAVPWGPATADATSS SPSHTAGGAPWNAAAATDAPSPLPPTSGTALPATVTAAAPSRLPPTSGAA VPLVPSPGATALPRPRTTATRTTDVAAAASSSPQHTTAGGTQIHPAATVV PASSPTSPYSGHASPQADWLSSPIEAAAPSSTARDARQADG back to topmRNA from alignment at Scaffold_390:380341..385001+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1274_4a-0001 ID=EsuBft1274_4a-0001|Name=EsuBft1274_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4661bp|location=Sequence derived from alignment at Scaffold_390:380341..385001+ (Ectocarpus subulatus male Bft15b) CAGCGGCAGCAGCAGACATCAGCGCACCCCCAACGACCTCTGCCTCCTCG
ACGGCGACCCCCTCTCCACCTCCGGGCGACATTCCTCCAGCTAGTGGCGC
CCCTCTTCGTCTCTTCCACACAAGTAGTGTGAAACCTCTAGGCGAGTCTG
ATTCTGTGACTGGAAATGAGATCGGAGTTGTTAGTGATGGGGAGGTGTCT
GGTGTTCCCGTTGCTGGTATGTCTGTGCTTGATGTTCCTGTTGTTCCTGC
AGTGAATCCTGCTATAACCTCTCAAGCTCCGGTATCCCACACTAGGATGT
CAACACCCAAAGGTGGTGAGCAGTTGCAGGAAGATAAGGGGACGAGTGCG
GGGATGTTTGATGCGAGGGAAGGAGTTGCGTTTGAGCATGATGTGGCTGT
GTTGGGTCGTGCCGAACAAATGGATGTTGACGTTTTCCACCACCGCGCTG
GCCACTTTCCCGAACCCATTTTGAGTATGACTGCCGAGCAACAAGGGAAC
ACCCTTCCCAGGGAGTTGGAACCCGGGAACACTGCCGCTTCGCCGCCCTC
TGCCAACGCTGCCACTTGGCCTGCCGTCGCCGCCGCCACGGCGGGGACCA
TCACCGCTTCGCCGCCCGCTGCTGCCGCTGTACCGTGGGGACCCGCCACT
GCCGACGCTACGTCATCGTCGCCGTCGCACACCGCTGGTGGCGCACCATG
GAATGCAGCCGCCGCCACCGACGCACCGTCGCCGCTGCCGCCAACCTCCG
GGACCGCGTTACCCGCCACTGTCACCGCGGCCGCGCCGTCGCGGCTGCCG
CCGACCTCCGGGGCCGCCGTGCCGCTTGTGCCTTCGCCAGGTGCCACCGC
GCTGCCGCGCCCGAGGACGACCGCGACGAGGACCACCGACGTGGCCGCCG
CCGCTTCGTCATCGCCGCAGCATACCACCGCAGGTGGGACACAGATTCAT
CCAGCCGCCACCGTCNCTGCCGACGCTACGTCATCGTCGCCGTCGCACAC
CGCTGGTGGCGCACCGTGGGATGCAGCCGCCGCCACCGACGCACCGTCGC
CGCTGCCGCCAACCTCCGGGACCGCGTTACCCGCCACTGTCACCGCGGCC
GCGCCGTCGCCGCTGCCGCCGACCTCCGGGGCCGCCGTGCCGCTTGTGCC
TTCGCCAGGTGCCACCGCGCTGCCGCGCCCGAGGACGACCGCGACGAGGA
CCACCGACGTCGCCGCCGCCGCTTCGTCATCGCCGCAGCATACCACCGCA
GGTGGGACACAGATTCATCCAGCCGCCACCGTCGTCCCCGCGTCGTCGCC
GACATCGCCTTACTCGGGGCATGCATCGCCACAGGCGGACTGGTTGTCTT
CTCCTATTGAGGCCGCTGCTCCATCTTCGACGGCGCGTGATGCACGGCAA
GCCGATGGTTAGGCATGGGTTGCTGGGGTCCGGTGAGCTGGGGGGCGGCG
AGTAGGGGGGCGATGGAGGACAATACGGTTGGGGGGGAGACGTGAAGGTG
ATCAAGAGCAAATAGGTGGGGGTCGATACCGGTGGAAATGATGAGTGGAG
AATGAGTGGTCGGTCGACCCCGCGTGGCACGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAAGCTGCTGATGAGACCTTCAATTTGCA
CCGCTTCTTGGAATAGCCCGTCCCCTACTTGCCAAGAAATGGCAAGAGGC
GTCTGGACCCGAAATTTCAATTTTTTTGGCTCTCGCTCTCAATCAGATAC
TTCGCTCTCAATCAGGCGAATATGTTGTTGATTCGAGATGGCATGAACAG
CAATCGAGTTGTTTCTGTTTCCATATGAATACCTGCTTAGCAAACGGACT
GTTGACGTATTGATAATAACGGAGTGTTCTTTCATGGACTCTGGAAATAT
CAGAGGCGTGTTTTGGGATGTGACAGAAGGGAGGCTGGTTGCATGGTTGA
TTGATTTTATACCATTGAACAGCAACGGCGACACCGCTTCGCAAGTACGC
GCTGCGTAGTAATTGGTCCTTGGAAACTGTAGTGGAGGAATGATTTGGCA
TGTTTTGATTGATGAGTACGTGTTGATTTGTCTTCGTGTGGCGGTTTTCT
TGGTAGAAGGCTTTCCGTTATCTCCTGTGTTTTTGACGCGCCTTTCCATG
TACCATCGGTCAGGGATAAACCCGTTCTCTCTGTTTTCGATGCTGTCGGC
AATTATCATGGGGAGGGAGAATAGGTTGTGTCATAAGAATTGCCACAGCA
TCACGAACAAATGAATGCTTTGTTTTTTTTTACTATGCCCGATTTGCAAA
GTCCGGGATTTGATTGCGTGAATGGCAATGCAAGTTTTTATGCGATTTTA
TTTGGTGTGCTTTCCGTACCCAAATGTCACAGGATGCGTTTGTCAAGTAG
ATGGTTGATCCCTTAACGTCTGGCGTTCGGAGCAGGGGGGCCGTAACCAG
ACTGCATTGGTAGGGTACGCAGGAAGGAAATCTATTGCTCTGTTGTCGAA
GGATGTATTTGTCAAGTAGAGGGTTAATCGCTTAATGTCTGATGTTCGGA
GTAGGGGGGCCGTAGCCAGACAACATGTTTTTGTAGGGTATGCAGGAAGG
AAAATTGTTGTTCTGTTGGAAATTGAAGAGAGGTTATTCACAGAATGTGG
CGTCCTGCAGCAGCGGAGGTGGCGGTGCTGTCGTAGCTCGTAGACTTTGT
AGTCTACCACAGAGGTTGGTCTACACTGCTGTGAGATCGGTAGGCCCGAG
CGAGCTCTGGAAAGAGAAATGTAGATGGATTTTCTTATCAACTGACTCCC
TGGTCAGGCTTTGATGGGTGCTAGATGAGAGTGAGCACAAGGGGCGAAGG
CGCGCTTGTGTCTCATCTCAACAACAAAACAAAAACAAGAAACAAGCAGC
AAAAACACAGCAGGTTCCGAGGGTCTCCGGAGTAATGGCCCGAGTACCGG
AATTTCGGGGTTCGGAACAATAAAACAACTACAGTCNGTTGGCGTTCGGT
ATTGTCGAGGTCCTCTGTGTTGGTTGGTATCTTGATGGCATTGTTTTGGA
CATCGGATTCAAGATTGACCGATACAAAATACTTGCTGCAGCAGTGTTTT
TGGTTCTATGGTCGGTTGGGTTTTCGTGATGGTCGTTGAGTATTGAAGTC
AAGACCGGCCGATAGGAAGTACTTCAGAGTTTTTGGTTTAATGGTCGGTT
GGATTATCGTGATATGCTTTTTGACATTAAATTACAGGTTGACCGATAGG
AGATACTTTCAAGTGTTTTTGGTGTAATGCTCGGTTGGATTTTCTTGATG
TTCGTTGAATGTTGAGTTGAAGACTGGCCGATAGGAAATACTTTGATGTG
GTCTTGTAGGTTCAATGGTCTTCGTGTTGTTTTGAGGATGATGCACGGAG
TAGAAGAAGAGCATTTATTTTTGCAATCATGATGATAATTTGATATTGGG
GATTTCGAATTCATGAGCAACCGATGGATTCTTGGTTGTGTTCCTGGCTT
AATGGTTTGCAACCGATGGAATGTCGATCAGTGTATCTGGTTTGATGGTT
TTTCATGAATGTTTTGATCTTCGGAGATTCCGGATACAATGGAGACCGAT
GGAGATTCTGGTTGGTATTGCCGGTTTAATGGTTTGCGACCAATGGAAAT
TCAAACTAGTGTTTCTGGGTGAATGGATTATTTTCGTTGCAAGAGAAATA
GGAGGAGATACGACTCTTCTTGCACATTGACATTGATTTCTGGAGTGTTC
GGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG
GTTGACCGATAGGAGATACTTTCAAGTGTTTTTGGTGTAATGCTCGGTTG
GATTTTCTTGATGTTCGTTGAATGTTGAGTTGAAGACTGGCCGATAGGAA
ATACTTTGATGTGGTCTTGTAGGTTCAATGGTCTTCGTGTTGTTTTGAGG
ATGATGCACGGAGTAGAAGAAGAGCATTTATTTTTGCAATCATGATGATA
ATTTGATATTGGGGATTTCGAATTCATGAGCAACCGATGGATTCTTGGTT
GTGTTCCTGGCTTAATGGTTTGCAACCGATGGAATGTCGATCAGTGTATC
TGGTTTGATGGTTTTTCATGAATGTTTTGATCTTCGGAGATTCCGGATAC
AATGGAGACCGATGGAGATTCTGGTTGGTATTGCCGGTTTAATGGTTTGC
GACCAATGGAAATTCAAACTAGTGTTTCTGGGTGAATGGATTATTTTCGT
TGCAAGAGAAATAGGAGGAGATACGACTCTTCTTGCACATTGACATTGAT
TTCTGGAGTGT back to topCoding sequence (CDS) from alignment at Scaffold_390:380341..385001+ >EsuBft1274_4a-0001 ID=EsuBft1274_4a-0001|Name=EsuBft1274_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=876bp|location=Sequence derived from alignment at Scaffold_390:380341..385001+ (Ectocarpus subulatus male Bft15b) ATGTCTGTGCTTGATGTTCCTGTTGTTCCTGCAGTGAATCCTGCTATAAC CTCTCAAGCTCCGGTATCCCACACTAGGATGTCAACACCCAAAGGTGGTG AGCAGTTGCAGGAAGATAAGGGGACGAGTGCGGGGATGTTTGATGCGAGG GAAGGAGTTGCGTTTGAGCATGATGTGGCTGTGTTGGGTCGTGCCGAACA AATGGATGTTGACGTTTTCCACCACCGCGCTGGCCACTTTCCCGAACCCA TTTTGAGTATGACTGCCGAGCAACAAGGGAACACCCTTCCCAGGGAGTTG GAACCCGGGAACACTGCCGCTTCGCCGCCCTCTGCCAACGCTGCCACTTG GCCTGCCGTCGCCGCCGCCACGGCGGGGACCATCACCGCTTCGCCGCCCG CTGCTGCCGCTGTACCGTGGGGACCCGCCACTGCCGACGCTACGTCATCG TCGCCGTCGCACACCGCTGGTGGCGCACCATGGAATGCAGCCGCCGCCAC CGACGCACCGTCGCCGCTGCCGCCAACCTCCGGGACCGCGTTACCCGCCA CTGTCACCGCGGCCGCGCCGTCGCGGCTGCCGCCGACCTCCGGGGCCGCC GTGCCGCTTGTGCCTTCGCCAGGTGCCACCGCGCTGCCGCGCCCGAGGAC GACCGCGACGAGGACCACCGACGTGGCCGCCGCCGCTTCGTCATCGCCGC AGCATACCACCGCAGGTGGGACACAGATTCATCCAGCCGCCACCGTCGTC CCCGCGTCGTCGCCGACATCGCCTTACTCGGGGCATGCATCGCCACAGGC GGACTGGTTGTCTTCTCCTATTGAGGCCGCTGCTCCATCTTCGACGGCGC GTGATGCACGGCAAGCCGATGGTTAG back to top
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