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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft124_3 |
| Protein domains | TMhelix |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 231 |
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-15_000830.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft124_3a-0001 ID=EsuBft124_3a-0001|Name=EsuBft124_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2313bp|location=Sequence derived from alignment at Scaffold_245:438592..443997+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TAAGCGACCATCGGAAGTGCAAGGGAAACCACCACCACCATCACCCAGGC AGCAACCACCGCCGCCGAAGCCCGTTCAGGAAAAGCCGAAGTAACCAGCG CCTAGGGAGAGCAAGAGTTACTGCACCATGGGGGGTTACGAAGGGCAGAA CAAGCGCGCGCTCATCTGGGCTGCTTTGTACTTCTTGGCATGGATTCTGC AAAGATTGTGGTGCCACCTGGGCCTGCCCGACCACTGCGACCTCGCGATG CGGCCATTGGACGTGCTGACGGATTTGGTGGTGCTCTTCACCTTCTCCCT CGCACAGGCATACTGGTGTGAGATCTTGCTAGACGACCGTTTCGAGGAGC TCAAGAAGGCTCCTTGGATTTTCGGCGTCATTCTCCTCACGCCAATTATC ATCTCGGCCCTTGGGCGTATCGATGGACTCGAGAGGTGGGACAAGGACAA CGAGGGCCGAGACTTCGAGTTCTCCGCCCTCCGATCGACCATCTTCGTCT TCGGCCTTATTGCCGCCGTGCTCATTGTAGCGTGGCACTTCGCACGGGCG TGGCTGACTCTTCCCGGCATGCAGCTGGTGTCGGGAGGCGTTAAGGTCGA GCCGCCTAAGGAAGACCTTCACGGCATCTACGCCTCCAGCCGCATCGTCA TCATCGCGTGGTGCATCCTCTTCACTTCGTTCATCATCTCCGAGGACGAC GGCTTCGATTACAGAGGCGCGCTACTCGCATGGATGCTGTCCCTGATTGC GGTATTCCCGCACCCCGTGAGTTACGCCTGGCTCGGTGTCAACACGGGTA TCTTCTTGCAAGGGATCGGTGCCAACCGTCTCCGGTTCCTGGGGTGCAAG GAATGGTGAACGCGTGATAATCGTCTTACGACTGTTGTTCTTTTGTGTGC GGGGGAGACAAAGAAGTGCATCGCGGAGCGGACTTAGTCGCCCGCGATGT CGTCTGAGGCTTCGCGATATCAGTGGCGTACTGTGAAATTTTCTGCTGGC TAGTGTGAGCTAGGGTCATGATGATGGTGTGGGGAAGGTTACGCTTGCGC AGCTGCTACACTTTTCGTTTGGTCGAGAGTTTTTGGCTGAGGGATCATGG GGCCCATAACAGGTTGGCGTTACACCGATACCCGCTCACACGACGAATTG TGTGAACTGACAGTTTCGTTGTGAGTCGGTAGGGTTTCGGCGGTTTGTTT GGGCGCTACCTTGTTGGATTATTCCAACTGTTCGGTGCCACATATTTTCT TTGATTTCGGTTCTTCGTTGAGGTACCCACTCCGAATCTTCACCGATATG GTCGGGTCCGATTTATTCATGATTTTCGCTTGATTGTCGTTTTTGTGTCT GTATTCGATTTGACAGTGAACGGGCAGGCAGCGTGCGCTTCGTTGGACTT GGGTTGAGGGAGGTTGGGCCTCTGCGTTGTTTGTTCGTGAGAAAGCACCA AGCATCCATGAACGAATCATGCCGTAGGGGCGTTGGCGGGTTTTACTGAT ACCACGCCACACATCATCGTGAGTGTGAGCCGATGGTCCGCTCCTCACGA TGAGAAACGCCTCCCAGGAAAAGAATAATATCTCACGCGTCGTAGCTACA ATCAGTCCGAATTTCAGACCGCCGAGAGCGTCTCGGAGTTTATATGTTGA TTTTGGCGGGGAGGATATTACAAAGAGGATCTGAGAGTACAGCAGTACCA ACGTTGGTTGCGCGGGCTTGGGGGTGGGGTGAATGAAGTGAAAGTGTCTT GTTTCTGGGAACAATAATAGTAGTGTTGTGGTGTCTGTCCCAGAATTCAA GGAAGTTGAAGCGTGGTAAGATGTTAATTTGACTTCTTGGTGCTTGTATT TATAATTTCGTTCCGGGGAGGACCAGACGGGTTCTCTGCTCAATCAAGGT GCTGCCATTTATTTGCAGGCGCGAAGACGTGACCGACAGCTAGCTGTAGA TGTCACGGCCTCTTTCGACATCTTTCTCCGGTGTGATCAGTGTAGTCTGG CGTGTGGTACCATAGAACAACGGTTACGCTAGTACGCACGCGGTGGCGAC GCAGCATGGCACGGTATGCGGATGTGGCGGTTAGATGACCTGACTCTGGC GATTCGAGCCATCCTTTTGAAAAGGATGGCCATTTTATTACACGTGCATG CAAGTTAATCTACTTGCATCGTTGCGTTCCCTGTCGGTGCCGCCTTCTTT CGTGCTGTTTTTCCGCTTTTGTTTCTTGAGAGGGAAATTCTTTCTTATCT GAAGGAGGTTGTAGGGGTCTTATCATGGATGTGGCGTTGCATCAAGGTGC TGCCATTTATTTG back to topprotein sequence of EsuBft124_3a-0001 >EsuBft124_3 ID=EsuBft124_3|Name=EsuBft124_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=243bp
MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDL VVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILLTPIIISALGRIDG LERWDKDNEGRDFEFSALRSTIFVFGLIAAVLIVAWHFARAWLTLPGMQL VSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALL AWMLSLIAVFPHPVSYAWLGVNTGIFLQGIGANRLRFLGCKEW back to topmRNA from alignment at Scaffold_245:438592..443997+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft124_3a-0001 ID=EsuBft124_3a-0001|Name=EsuBft124_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5406bp|location=Sequence derived from alignment at Scaffold_245:438592..443997+ (Ectocarpus subulatus male Bft15b) TAAGCGACCATCGGAAGTGCAAGGGAAACCACCACCACCATCACCCAGGC
AGCAACCACCGCCGCCGAAGCCCGTTCAGGAAAAGCCGAAGTAACCAGCG
CCTAGGGAGAGCAAGAGTTACTGCACCATGGGGGGTTACGAAGGGCAGAA
CAAGCGCGCGCTCATCTGGTGAGAAGGGGCGTGTGTTTCGCGCCGTATTC
ATTTTCCGACGCTTGTCGCCCTGGAAGGGACCATGGCGTGTGCTCCGGCC
CATGCTGCTGCCGTTGACGGCTGTGCATGCGTGCGGCAACGTTGTGTGCG
ATAGCGTTCCTTGCACCAACCCTCTCTCGTCCCTCTCTCGCACTTGCCGT
TTGTCAAAACCTCTTGGCTCTGTTGCGACAGGGCTGCTTTGTACTTCTTG
GCATGGATTCTGCAAAGATTGTGGTGGTGAGTGCTCAGCCTGCTGCGTGC
TTGGGCGCCATCCACCACTTGGGTCCTGCTCGTAGCAAGGTAGTAGGCCC
CGTAACTAGTCCTAGTATGCTCTACCCTTTTTCGCCCGAGGCGAGCGCTG
ATGCCGGACGCAGATTTTGCTGGTCGCGCAATTTTTTTCCTGTTGTGACA
AAATTGGTCAACGGCCAAAAAATGTCCTGAACGCTTGCGCCTGACACCTG
GTGCCGCTGCATCTGCGTGTCCATCTCCTACAGCCACCTGGGCCTGCCCG
ACCACTGCGACCTCGCGATGCGGCCATTGGACGTGCTGACGGATTTGGTG
GTGCTCTTCACCTTCTCCCTCGCACAGGTAGGGATGGAGGTCCATCTGCG
TGGTAGAGTACAGATGTAGTGGTTGGCAGGATCACCTCCTGACAGCATGC
ATATCGATCCGTGCACATTCTGTCTTGGGAGCAACCGTGGAACACACACG
CACGCACCCTTGTCGCGCAACGGTCAGCGATTTTTGGGATGGATAGCTGT
ACTGCTGTTGTTCATTTACCCTCGGTCTTCCGCGTCATGACAAGAGAAAC
CTTTTTGGCAGTAGCATCGGTGTTCCATCGGCACAAGGGAACAATATTAA
AGTCTAGGCAAAACAGACCGCAGTTCCCGCCCTGTTCCTGTTCCTGCGAC
TCATTGTGCTCGCCAAAAATGCGCAGCAGCGGCATCATCATCATCATCTG
CAGCTAGAAGCTGCCATTGTTCAATGGTGGCTTGGCACCTGGCAATGCCG
CTTTCTCCGGCCTTCCTTTCATGCATTCGTCGAATGGCCGTTCGTGATTC
CGACATCCGTGCTTCGCACTATTAGACTAGGTGGAAAAAGCGGGATTTCT
TTCGTCGCGCTCTCTATCATCCAGAATGTGGGAAGGGTTGAACGGCTGTC
CCATGCATGTTGAGAAGCTGAAGTGGACGTAGCATATGATAGGGTCACAT
CCGAAAACATGCCCATGCTAGCAGATGCCCACGCTGGCAGGCGGCTAATG
TGTAGTGCATTTCCTCGTGCCCCAAGCGGTAATCTCGTGCGTCAGTAGTG
CCAAGCCGAGACAATACATGACGTGCAAATCAGCAAATATGTTATTCCGT
CGTCCTTGAGGGTACGTATCGCTGCCTACTTGGTCGCGGTCGACATTTTT
TGTTCGAAAATATACGCAATCTCACAGGAAGACTGCCCGTTCGAATTAAA
CCCTGCTCCATCTACACGCGCATCATACCCACTGCTGTTTTCCCATGCTC
CTCGCTCGCATTTTATTTTTATGGTGGTCCTGCTGATGCAGGCATACTGG
TGTGAGATCTTGCTAGACGACCGTTTCGAGGAGCTCAAGAAGGCTCCTTG
GATTTTCGGCGTCATTCTCCTCACGTGAGTGCCTCCACACACACCATGAT
ATGTGCACCCTTTGTTGCTGTGTGTTGTGTGTGTGTGTGTGCGTGTGCTT
TGTCTTCACTTCAAATCAGCGCTCACAGCACTATTATAGTGCTGTTTTCT
CCAACCCGTGGACACACAGAAGAGCCCCTCTTTACCCTCCCCTCCTGCGG
TACTTTGCCTCCGATTATTAGTGCGAAAAGAGCACATCACTCTCTTCCCT
CTACGTACACACGACCTAGCGCCATCCACTAGGCCAGGAGCGGAAGCGAG
TGAAAAACTCTCCGAAAGCTCGCTTACGCCGGGGTTCGAACCCCTGACCT
GACCTCTGAAAGGTTTCGAGGTTACCAAGTAGACCACTGGGGCGACCGGT
GTGTTAAGTCATCTCGGAACAGCATTGTTATCGCACAGCAAGTTTCCACT
TTTTATTTCAGCCTCCTGTTTTCGAGTTAGGGCTAGCGTCAACAAACACT
ACGAAAAATACGTGCACTCTTCCTTCATGTTGGGTGGTTTCGAACTACAG
ATGTATGCTTTCCTCTATACGACTTGGGGCTCAACACACACCGTACAAGT
GCACGCTTCAATCATGTTGTCGATGCCCATAGCACGGTTAATCTTTTTGA
TTTGAGAGTTTTTCGGGATTGACGCGAGGTACGAGGGATGTTGGTATGTA
CCTACACCGACTACAGTAGTCCTACCGGCGACCCCTCGAGCTTCTAATAA
ATAGTACTAGCAGTAGTCCAGTTTGTAGATGTGCCGTCCCAGAAATACCA
CAGTAGTCGAAGCTACGGGTGTACAGGTGTCAACGCGAGGAGGGAATGGG
TTGCCACAAGCCAAGGGTCGGACTTGCTGTATATGATTGGTCTGTTGGCC
TTCATGAACAACCATAAAACAAGGAAGTCACCGTACACATTTGTGGTGTC
TGTTGCGACCCTAAAAAGGCGAGACGGAAACACACACAAAAGCACAACAA
ACCGCGAGGGGCTTCCGCTCGACGTCGTGTTCCTTGGCACTTTGCGGTGT
TCCTTGGCACCATGCGGTGACTTTCTCTCCCCATCTCATGCTCCTCTCCG
TCACTACTCTGACCTGCCACGCTTCTAAACCTCGTGATGCTCATAACAAC
GCAGGCCAATTATCATCTCGGCCCTTGGGCGTATCGATGGACTCGAGAGG
TGGGACAAGGACAACGAGGGCCGAGACTTCGAGTTCTCCGCCCTCCGATC
GACCATCTTCGTCTTCGGCCTTATTGCCGCCGTGCTCATTGTAGCGTGGC
ACTTCGCACGGGCGTGGCTGGTGAGAGAAACACACCGATATTTTTTGCCG
GACAAGCGGACATGTGTTGTACCCCAGCAACAATCGCATCGAAGCTTGCA
CGATATGTCAACCCGACCGACTCGTTACGTCTAAGCGCCCAACGTTTCCC
CTCGCTTCCTCCCCCGTGGTTCTTGTTTACTTATTTTTTTCGGAAGACTC
TTCCCGGCATGCAGCTGGTGTCGGGAGGCGTTAAGGTCGAGCCGCCTAAG
GAAGACCTTCACGGCATCTACGCCTCCAGCCGCATCGTCATCATCGCGTG
GTGCATCCTCTTCACTTCGTTCATCATCTCCGAGGACGACGGCTTCGATT
ACAGAGGCGCGCTACTCGCATGGGTGCGTACATGTGGCGGGAACTTTTGC
TTTTCGGTTGGGTACAATCTTGTTGGTTAGATCATGCGTGTGGCTCGGTA
TCGAGTTGGGTATGTTGGTGAGGCTTCGTATGTAGTACCTTGTTCAAGGT
GCATTGCTGTAGAACCTCGTGTTGGGCTGGCGAAAAAAGGAGGCTCTCTC
TTTGTTCTGGTGTACCTTCTATTTCCAATTAAGTACTAGTGGATGGCGGG
CGATGTACAGGAGAAGGTTGTTCTAGTAGCAGCAGCAGTGTTGATTGGTG
GACAGTGACCCACCCCCACGCTCTTACAAGCTCGAACCCCTCCTCCCTTT
TCCCCGCCGCGCCGTGCGATCCGCAGATGCTGTCCCTGATTGCGGTATTC
CCGCACCCCGTGAGTTACGCCTGGCTCGGTGTCAACACGGGTATCTTCTT
GCAAGGGATCGGTGCCAACCGTCTCCGGTTCCTGGGGTGCAAGGAATGGT
GAACGCGTGATAATCGTCTTACGACTGTTGTTCTTTTGTGTGCGGGGGAG
ACAAAGAAGTGCATCGCGGAGCGGACTTAGTCGCCCGCGATGTCGTCTGA
GGCTTCGCGATATCAGTGGCGTACTGTGAAATTTTCTGCTGGCTAGTGTG
AGCTAGGGTCATGATGATGGTGTGGGGAAGGTTACGCTTGCGCAGCTGCT
ACACTTTTCGTTTGGTCGAGAGTTTTTGGCTGAGGGATCATGGGGCCCAT
AACAGGTTGGCGTTACACCGATACCCGCTCACACGACGAATTGTGTGAAC
TGACAGTTTCGTTGTGAGTCGGTAGGGTTTCGGCGGTTTGTTTGGGCGCT
ACCTTGTTGGATTATTCCAACTGTTCGGTGCCACATATTTTCTTTGATTT
CGGTTCTTCGTTGAGGTACCCACTCCGAATCTTCACCGATATGGTCGGGT
CCGATTTATTCATGATTTTCGCTTGATTGTCGTTTTTGTGTCTGTATTCG
ATTTGACAGTGAACGGGCAGGCAGCGTGCGCTTCGTTGGACTTGGGTTGA
GGGAGGTTGGGCCTCTGCGTTGTTTGTTCGTGAGAAAGCACCAAGCATCC
ATGAACGAATCATGCCGTAGGGGCGTTGGCGGGTTTTACTGATACCACGC
CACACATCATCGTGAGTGTGAGCCGATGGTCCGCTCCTCACGATGAGAAA
CGCCTCCCAGGAAAAGAATAATATCTCACGCGTCGTAGCTACAATCAGTC
CGAATTTCAGACCGCCGAGAGCGTCTCGGAGTTTATATGTTGATTTTGGC
GGGGAGGATATTACAAAGAGGATCTGAGAGTACAGCAGTACCAACGTTGG
TTGCGCGGGCTTGGGGGTGGGGTGAATGAAGTGAAAGTGTCTTGTTTCTG
GGAACAATAATAGTAGTGTTGTGGTGTCTGTCCCAGAATTCAAGGAAGTT
GAAGCGTGGTAAGATGTTAATTTGACTTCTTGGTGCTTGTATTTATAATT
TCGTTCCGGGGAGGACCAGACGGGTTCTCTGCTCAATCAAGGTGCTGCCA
TTTATTTGCAGGCGCGAAGACGTGACCGACAGCTAGCTGTAGATGTCACG
GCCTCTTTCGACATCTTTCTCCGGTGTGATCAGTGTAGTCTGGCGTGTGG
TACCATAGAACAACGGTTACGCTAGTACGCACGCGGTGGCGACGCAGCAT
GGCACGGTATGCGGATGTGGCGGTTAGATGACCTGACTCTGGCGATTCGA
GCCATCCTTTTGAAAAGGATGGCCATTTTATTACACGTGCATGCAAGTTA
ATCTACTTGCATCGTTGCGTTCCCTGTCGGTGCCGCCTTCTTTCGTGCTG
TTTTTCCGCTTTTGTTTCTTGAGAGGGAAATTCTTTCTTATCTGAAGGAG
GTTGTAGGGGTCTTATCATGGATGTGGCGTTGCATCAAGGTGCTGCCATT
TATTTG back to topCoding sequence (CDS) from alignment at Scaffold_245:438592..443997+ >EsuBft124_3a-0001 ID=EsuBft124_3a-0001|Name=EsuBft124_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=732bp|location=Sequence derived from alignment at Scaffold_245:438592..443997+ (Ectocarpus subulatus male Bft15b) ATGGGGGGTTACGAAGGGCAGAACAAGCGCGCGCTCATCTGGGCTGCTTT GTACTTCTTGGCATGGATTCTGCAAAGATTGTGGTGCCACCTGGGCCTGC CCGACCACTGCGACCTCGCGATGCGGCCATTGGACGTGCTGACGGATTTG GTGGTGCTCTTCACCTTCTCCCTCGCACAGGCATACTGGTGTGAGATCTT GCTAGACGACCGTTTCGAGGAGCTCAAGAAGGCTCCTTGGATTTTCGGCG TCATTCTCCTCACGCCAATTATCATCTCGGCCCTTGGGCGTATCGATGGA CTCGAGAGGTGGGACAAGGACAACGAGGGCCGAGACTTCGAGTTCTCCGC CCTCCGATCGACCATCTTCGTCTTCGGCCTTATTGCCGCCGTGCTCATTG TAGCGTGGCACTTCGCACGGGCGTGGCTGACTCTTCCCGGCATGCAGCTG GTGTCGGGAGGCGTTAAGGTCGAGCCGCCTAAGGAAGACCTTCACGGCAT CTACGCCTCCAGCCGCATCGTCATCATCGCGTGGTGCATCCTCTTCACTT CGTTCATCATCTCCGAGGACGACGGCTTCGATTACAGAGGCGCGCTACTC GCATGGATGCTGTCCCTGATTGCGGTATTCCCGCACCCCGTGAGTTACGC CTGGCTCGGTGTCAACACGGGTATCTTCTTGCAAGGGATCGGTGCCAACC GTCTCCGGTTCCTGGGGTGCAAGGAATGGTGA back to top
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