EsuBft124_22a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft124_22a-0001
Unique NameEsuBft124_22a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_245contigScaffold_245:206207..208581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog9978.XP_004593494.1
ProteomeIdEsuBft124_22
Protein domainsSSF143724
Protein domainsIPR007702
Protein domainsPTHR12258
Ownerapollo_admin@sb-roscoff.fr
Note14 kda phosphohistidine phosphatase os:oryctolagus cuniculus gn:phpt1 pe:1 sv:1 [Automatic annotation]
Nb exon3
Max annot lvl33208|Metazoa
Length1134
Hectar predicted targeting categoryother localisation
Evalue1.09e-18
EggNOG OGs2CUCZ@1|root,2S4DR@2759|Eukaryota,3A611@33154|Opisthokonta,3BT9Q@33208|Metazoa,3D9EE@33213|Bilateria,48EJ2@7711|Chordata,49BJS@7742|Vertebrata,3JGWD@40674|Mammalia,35Q7X@314146|Euarchontoglires
Ec32 ortholog descriptionJanus
Ec32 orthologEc-20_003030.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred namePHPT1
KEGG koko:K01112
GOsGO:0000003,GO:0002682,GO:0002683,GO:0002791,GO:0002793,GO:0003006,GO:0003674,GO:0003824,GO:0004721,GO:0005246,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007548,GO:0008150,GO:0008152,GO:0008200,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0016247,GO:0016248,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019855,GO:0022414,GO:0023051,GO:0023056,GO:0023057,GO:0032024,GO:0032502,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0033043,GO:0035774,GO:0035971,GO:0036211,GO:0040012,GO:0040017,GO:0042578,GO:0043086,GO:0043170,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044325,GO:0044424,GO:0044444,GO:0044464,GO:0046883,GO:0046887,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050708,GO:0050714,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051222,GO:0051223,GO:0051270,GO:0051272,GO:0051338,GO:0051339,GO:0051348,GO:0051350,GO:0051493,GO:0060341,GO:0061178,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0071704,GO:0090087,GO:0090276,GO:0090277,GO:0098772,GO:0099106,GO:0101006,GO:0140096,GO:1901564,GO:1903530,GO:1903532,GO:1904951,GO:2000145,GO:2000147,GO:2000249,GO:2000983,GO:2000984
EC3.9.1.3
Descriptionpeptidyl-histidine dephosphorylation
COG categoryS
BRITEko00000,ko01000
Cross References
External references for this mRNA
DatabaseAccession
GO2000984
GO2000249
GO0052745
GO2000147
EC3.1.3
GO0051350
GO0008969
GO0070062
GO0050860
GO0004721
GO0005829
GO0035971
GO0044325
GO0019855
EC3.1.3.18
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft124_22aEsuBft124_22aEctocarpus subulatus male Bft15bgeneScaffold_245 206207..208581 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft124_22a-0001-exonagat-exon-94912Ectocarpus subulatus male Bft15bexonScaffold_245 206207..206732 +
EsuBft124_22a-0001-exonagat-exon-94913Ectocarpus subulatus male Bft15bexonScaffold_245 206985..207165 +
EsuBft124_22a-0001-exonEsuBft124_22a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_245 208155..208581 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft124_22a-0001-cdsEsuBft124_22a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_245 206207..206732 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft124_22a-0001-exonagat-three_prime_utr-2356Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_245 208261..208581 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft124_22a-0001EsuBft124_22Ectocarpus subulatus male Bft15bpolypeptideScaffold_245 206207..208260 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft124_22a-0001 ID=EsuBft124_22a-0001|Name=EsuBft124_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1134bp|location=Sequence derived from alignment at Scaffold_245:206207..208581+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGCTGGGGCGAACCCGGTTTCTCGGCCTGTCCGGATCGCTACCGC
GGGACACTTCCTCACTTTTTCGTCGTTCTCTGGAACGTTCCCGGCTCGGA
GCACCCCGCTGCCGCCCTTCTCCTTCTCGTGCTTTTCCACCACCGACGGC
GGCGGCGGCGGCAGCGGCAGCAAACAACGCAGTCTACTCAGCACCGCCAC
TCGTCACCGCCCGCCGCTAGCAGCAGCATCGCTCGGGCTTCGGGGGCAAC
AGAAACCGCTGCTGCTCGGGCGGCGCTCCGCGAGGGGTTCCGGTCTCTCT
GCCGGTTGGGCCTCGGGGCGCTTAAGGATGATGAGCGAGGAGGGTGGGGC
TGATGGCGCCACCTCCACGGCCGGTTGCGACAAACAGGAAGGCGGGTCGG
ATTCGGGGGCGTCCGGTGGTGGTGGAGGGGCTAGAACGAAAGGGGGGCGT
GGCGGCGAGGCATTCCCGTCCGTTACGCTCGACGCCGATGCGGTCCAGAA
GTTCGCCGAGATCCAGGTCCGGTGGGGCGGCACGGACGAAAGCTCTGAGC
CAACTATCCTGATCCGGGGCCTGAAATCTGCCAAATACCACATCGAAGCG
GCTGAACCCACGATGGCGCGTTTGCGGGAGGCTGGAGCAGACGCCACCGT
TACCGGCGGCGGGCGCATCAAGCACAGCAGCAAGAGACGAAGCATATTCA
TCTATGGGTACAGCATGCAGTTTGGCCCGGCGAACCTCCCGCGAGTGGCC
GACCTTTGCCGGAAGCAGTTTCCGTCGGACTACGAGGTTACTTGGACCGA
AGGCGGTTACTAGTTGCGCCCCCTGTTTAAATAGGCGGTGATTACAGCTG
CAGCAGAGTGCACTCTATTCAGCAGTGGCCCGCCCCTCAACAACGTCGGA
TGGATACCGCCTCCCTCAAAAACTGGGCACAGACGGAGTCACCACAGTCA
TTCTGTACAGTGAATAGTGTTCCCTCTGAATAGCGCCGGTCGATTCGCCG
GGAACAAACTGGCGTTGTTTAGGGCCACTACTGAAGGGGCTCGGAGACAA
TAAAAACATCTTGGCTATTGCACGGGTCAACGTGCTGTAGGTATGAGTCA
AATCTGTGGGGGCTACGTGTATGGGTAGTGTGGG
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protein sequence of EsuBft124_22a-0001

>EsuBft124_22 ID=EsuBft124_22|Name=EsuBft124_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=270bp
MPAGANPVSRPVRIATAGHFLTFSSFSGTFPARSTPLPPFSFSCFSTTDG
GGGGSGSKQRSLLSTATRHRPPLAAASLGLRGQQKPLLLGRRSARGSGLS
AGWASGRLRMMSEEGGADGATSTAGCDKQEGGSDSGASGGGGGARTKGGR
GGEAFPSVTLDADAVQKFAEIQVRWGGTDESSEPTILIRGLKSAKYHIEA
AEPTMARLREAGADATVTGGGRIKHSSKRRSIFIYGYSMQFGPANLPRVA
DLCRKQFPSDYEVTWTEGGY
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mRNA from alignment at Scaffold_245:206207..208581+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft124_22a-0001 ID=EsuBft124_22a-0001|Name=EsuBft124_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2375bp|location=Sequence derived from alignment at Scaffold_245:206207..208581+ (Ectocarpus subulatus male Bft15b)
ATGCCCGCTGGGGCGAACCCGGTTTCTCGGCCTGTCCGGATCGCTACCGC
GGGACACTTCCTCACTTTTTCGTCGTTCTCTGGAACGTTCCCGGCTCGGA
GCACCCCGCTGCCGCCCTTCTCCTTCTCGTGCTTTTCCACCACCGACGGC
GGCGGCGGCGGCAGCGGCAGCAAACAACGCAGTCTACTCAGCACCGCCAC
TCGTCACCGCCCGCCGCTAGCAGCAGCATCGCTCGGGCTTCGGGGGCAAC
AGAAACCGCTGCTGCTCGGGCGGCGCTCCGCGAGGGGTTCCGGTCTCTCT
GCCGGTTGGGCCTCGGGGCGCTTAAGGATGATGAGCGAGGAGGGTGGGGC
TGATGGCGCCACCTCCACGGCCGGTTGCGACAAACAGGAAGGCGGGTCGG
ATTCGGGGGCGTCCGGTGGTGGTGGAGGGGCTAGAACGAAAGGGGGGCGT
GGCGGCGAGGCATTCCCGTCCGTTACGCTCGACGCCGATGCGGTCCAGAA
GTTCGCCGAGATCCAGGTCCGGTGGGGTGAGTTTTGCTGGCCTACAAAAG
GCCAGGGGCCCTCCGGTTGTTCACAAGAGACAGGTTTGGGGAGCGCCCCC
CGAGCGGCGGGACTGTTAGACGGGGACGAAATACGTGGTGCCCGGGACAA
GCCGTAGGGCATATGGGGGGGGAGGTCACCGTTTGCCGCGCGCTCACGCG
AGTAACAAAAAACAATGAGGTCCTCGTTTTTTTTACACCCGATTTTTTTT
TTGGTGTTTTCGCGCACGCGAAGCGCAGGCGGCACGGACGAAAGCTCTGA
GCCAACTATCCTGATCCGGGGCCTGAAATCTGCCAAATACCACATCGAAG
CGGCTGAACCCACGATGGCGCGTTTGCGGGAGGCTGGAGCAGACGCCACC
GTTACCGGCGGCGGGCGCATCAAGCACAGCAGCAAGAGACGAAGCATATT
CATCTATGGGTGAGCGAAACACTTTAAGTAGTCTGGTTGGAGCGACGCTC
GCGTGAACATGTGTATGCGTATGTTTTTTTCCGCCATTTCTTCTGCGGGC
GGACTGGAACACAATTGCTGCTTGAGGCTGGTTTCTCGAAACAGCGGCAA
GCGTGCGTGAAGTTGGTGCGGGCAGGGGAGGAGTGCCTGGAGGGGTATTT
TTCTCCAAGACGAGCTAAGGTTAATGGGTTTCTCACGCCTCCCCCGCTGC
GACGGTGGCAAAGCAGTAGACGCGTACACGATCGGTACGTCCCGATGCTC
CATACTGCTGTACCAGTAGAGCTATGCGGAAGGAACGACGGGAACGAATC
GTGGTCACGGGTATCTTGTGTCGGTTGTTGGTTGCGGCTGTCGTTCAGGC
GCGCATCCCAAAGACACACCGTAGTCGCCCCACACACCACCAAAAGACGG
TACAGCAGTATTACGTGGAATTTCACCGTTTCCGTATCCGTCTTGTCAAC
GGCGTGCACGGTGTTTGTTCCTCGCTTTCAAAGCTATCCTCTCTTTTTCA
GTAGCATTAGTACCATGGCACACCTACGCAAAAGCGACTGATCGATCGAC
CCTGCTTTTTCTTTCAATGTGCATGTCTGCGACCGACCTTGTTTCCGTCC
GTTCGCCTACGAACGGTCCGGAAGATTCGATGCGTGTGCCTGCGGGGATG
AGGATCTGGCTTGTCACCCCAGCCAGGCGTGGTCGATGGCAGATATTGCG
TGCTCGTTTCAACAACGAGCGCGCCACACCACCGATGGCTCCCCCACCCA
GAATACATCACTTGTCCAAACACTGCTATGATAGATAGCGCGGGCAAATG
AACAGATACAATTATTCTTCCCCCTGAACTTCGTACGGCACCCAAGGATT
GGTTCGTGTGGTAGCTTTTTTTGTATGACTCCTCCCCCTTCCCTCATCGT
TCGTGGGTGCTCTACCGAAATGAAAAACGTTGGCAACAACAACAACAGGT
ACAGCATGCAGTTTGGCCCGGCGAACCTCCCGCGAGTGGCCGACCTTTGC
CGGAAGCAGTTTCCGTCGGACTACGAGGTTACTTGGACCGAAGGCGGTTA
CTAGTTGCGCCCCCTGTTTAAATAGGCGGTGATTACAGCTGCAGCAGAGT
GCACTCTATTCAGCAGTGGCCCGCCCCTCAACAACGTCGGATGGATACCG
CCTCCCTCAAAAACTGGGCACAGACGGAGTCACCACAGTCATTCTGTACA
GTGAATAGTGTTCCCTCTGAATAGCGCCGGTCGATTCGCCGGGAACAAAC
TGGCGTTGTTTAGGGCCACTACTGAAGGGGCTCGGAGACAATAAAAACAT
CTTGGCTATTGCACGGGTCAACGTGCTGTAGGTATGAGTCAAATCTGTGG
GGGCTACGTGTATGGGTAGTGTGGG
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Coding sequence (CDS) from alignment at Scaffold_245:206207..208581+

>EsuBft124_22a-0001 ID=EsuBft124_22a-0001|Name=EsuBft124_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=813bp|location=Sequence derived from alignment at Scaffold_245:206207..208581+ (Ectocarpus subulatus male Bft15b)
ATGCCCGCTGGGGCGAACCCGGTTTCTCGGCCTGTCCGGATCGCTACCGC
GGGACACTTCCTCACTTTTTCGTCGTTCTCTGGAACGTTCCCGGCTCGGA
GCACCCCGCTGCCGCCCTTCTCCTTCTCGTGCTTTTCCACCACCGACGGC
GGCGGCGGCGGCAGCGGCAGCAAACAACGCAGTCTACTCAGCACCGCCAC
TCGTCACCGCCCGCCGCTAGCAGCAGCATCGCTCGGGCTTCGGGGGCAAC
AGAAACCGCTGCTGCTCGGGCGGCGCTCCGCGAGGGGTTCCGGTCTCTCT
GCCGGTTGGGCCTCGGGGCGCTTAAGGATGATGAGCGAGGAGGGTGGGGC
TGATGGCGCCACCTCCACGGCCGGTTGCGACAAACAGGAAGGCGGGTCGG
ATTCGGGGGCGTCCGGTGGTGGTGGAGGGGCTAGAACGAAAGGGGGGCGT
GGCGGCGAGGCATTCCCGTCCGTTACGCTCGACGCCGATGCGGTCCAGAA
GTTCGCCGAGATCCAGGTCCGGTGGGGCGGCACGGACGAAAGCTCTGAGC
CAACTATCCTGATCCGGGGCCTGAAATCTGCCAAATACCACATCGAAGCG
GCTGAACCCACGATGGCGCGTTTGCGGGAGGCTGGAGCAGACGCCACCGT
TACCGGCGGCGGGCGCATCAAGCACAGCAGCAAGAGACGAAGCATATTCA
TCTATGGGTACAGCATGCAGTTTGGCCCGGCGAACCTCCCGCGAGTGGCC
GACCTTTGCCGGAAGCAGTTTCCGTCGGACTACGAGGTTACTTGGACCGA
AGGCGGTTACTAG
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