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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft123_25 |
| Protein domains | SSF56672 |
| Protein domains | Coil |
| Protein domains | PTHR19446 |
| Protein domains | IPR000477 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | rna-directed dna polymerase from mobile element jockey os:drosophila funebris gn:jockey\pol pe: [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2160 |
| Evalue | 1.02e-159 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0006259 |
| GO | 0003824 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft123_25a-0001 ID=EsuBft123_25a-0001|Name=EsuBft123_25a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2160bp|location=Sequence derived from alignment at Scaffold_38:449975..453457- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTTGGGACGAAGTAGTGCAGAAGGCCAACGGAGGCCTGGA GGGAAACGTCAAGCAGATGTGGGAAGGGATTAGTGGAATGGTAAAAAAGA CCGCGCAAGGGGGGGATACAGGGGTCGCAACTTTGCGAGGTGTGAACGGT GGATTAGTCACTAGTGGGAAGGGAAAAAGGGAAGTTCTAGCAAGACACTT CAAGAGACTTGGAGTGCCCTCGGAGAATGAAGCTTTTGACCAAGCGTTTA AGAAGGAGGTGGACGCATGGGCCCAAAAAGAAGAAGAGACATCGAAGGCA GACGTTGGGAACGTAGAACTAGAAAAGGAGTTCACTGAGGACGAGGTTGA GGCGTGTGTGAACAAGCTGAAGTGCCACAAAGCAGCAGGAGCGGATGGGA TAGTCAACGAGTTCATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATG GTACTGCTATACAATTGGGTGTGGAAAAACGAGTATACGCCAAGTAGATG GAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAAGGAGACAAGACTGACC CAGGAAACTACAGGGGGATCACACTGTTGAACACAGTAGGAAAAGTGTTC TGTAAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAACATAG CATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACC ACGTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGGGAAAG CCGACGTACTGCTTCTTCCTGGACGTGAAAAAGGCATACGACACCGTATG GAGAAATGGGTTGTGGAAACAACTGTCCAAATACGGGATCAAGGGGAAAA TGTGGAGAGTGCTGAAGAAGATGACAGAGTGCACGAAAAGCGCGGTCATG CTAGACGGAGAACTGTCAAAATTCTTCGACATTGAGCAGGGGGTCCCACA AGGTTGCACGCTGTCCCCAACATTGTTCCAGGTGTTCATCAACGATCTGT TGGAAGTCGTAGAGGCAGTCCGGAAGGGAGCAAGAGTAGGGGACACGGAA ACGTCGGGGGGCCCACAAGGTTGCACGCTGTCCCCAACATTGTTCCAGGT GTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGTCCGGAAGGGAGTAA AAGTAGGGGACACGGAAACGTCGGTTTCAGGAATGCTGTTTGCGGATGAT TTTGTCGGTATGTCGGACACCCCTGAGGGACTGCAACTGCAAATTGACGC GGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTCAGAAGA GTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGA TGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGGACCAGTACACATACCT CGGAGTAGAGATCGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGG TAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCA AACCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAAT CGTACCGCCGCTAGAGTACGCCGGAGAGATGAAAGCAGCGAAAANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGCGCACAAGTAATGCAGTCGTGAGGGCAGAATTGGGGATCCAATC CCTACGGTCGGAAAGAGACGCGAGGAAGCTGACATGGAAGTATCGCATGT ACGGGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAACGAA AAAACGATCGCGGTAATTGGGGATAGATGGTGGGCACAAGAGGCCGTAGA GGACGGGGATAAGATGTGCAAGGAATTTTTATGTAGTTTGTGGCAGAAAC GTAAAGAGCTCCCAAATGTTGGTGGTGTCTCTAGTAGGGGTAGGAACGGT GCTCCGTCTCGAAAGGGACGCGCGGTCAATGGTCAAATGACTATTGCAAG CAACAAATGA back to topprotein sequence of EsuBft123_25a-0001 >EsuBft123_25 ID=EsuBft123_25|Name=EsuBft123_25a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=719bp
MIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXWDEVVQKANGGLEGNVKQMWEGISGMVKKTAQGGDTGVATLRGVNG GLVTSGKGKREVLARHFKRLGVPSENEAFDQAFKKEVDAWAQKEEETSKA DVGNVELEKEFTEDEVEACVNKLKCHKAAGADGIVNEFMKFGGKGMIQLM VLLYNWVWKNEYTPSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVF CKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTVGRIIQGRKRAGK PTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVM LDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLEVVEAVRKGARVGDTE TSGGPQGCTLSPTLFQVFINDLLEVVEAVRKGVKVGDTETSVSGMLFADD FVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHR WKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILA NRHLDTRIKLTVLKSVIVPPLEYAGEMKAAKXXXXXXXXXXXXXXXXXXX XXRTSNAVVRAELGIQSLRSERDARKLTWKYRMYGMGEERLPRIVWEANE KTIAVIGDRWWAQEAVEDGDKMCKEFLCSLWQKRKELPNVGGVSSRGRNG APSRKGRAVNGQMTIASNK back to topmRNA from alignment at Scaffold_38:449975..453457- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft123_25a-0001 ID=EsuBft123_25a-0001|Name=EsuBft123_25a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3483bp|location=Sequence derived from alignment at Scaffold_38:449975..453457- (Ectocarpus subulatus male Bft15b) ATGATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGGGACGAAGTAGTGCAGAAGGCCAACGGAGGCCTGGA
GGGAAACGTCAAGCAGATGTGGGAAGGGATTAGTGGAATGGTAAAAAAGA
CCGCGCAAGGGGGGGATACAGGGGTCGCAACTTTGCGAGGTGTGAACGGT
GGATTAGTCACTAGTGGGAAGGGAAAAAGGGAAGTTCTAGCAAGACACTT
CAAGAGACTTGGAGTGCCCTCGGAGAATGAAGCTTTTGACCAAGCGTTTA
AGAAGGAGGTGGACGCATGGGCCCAAAAAGAAGAAGAGACATCGAAGGCA
GACGTTGGGAACGTAGAACTAGAAAAGGAGTTCACTGAGGACGAGGTTGA
GGCGTGTGTGAACAAGCTGAAGTGCCACAAAGCAGCAGGAGCGGATGGGA
TAGTCAACGAGTTCATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATG
GTACTGCTATACAATTGGGTGTGGAAAAACGAGTATACGCCAAGTAGATG
GAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAAGGAGACAAGACTGACC
CAGGAAACTACAGGGGGATCACACTGTTGAACACAGTAGGAAAAGTGTTC
TGTAAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAACATAG
CATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACC
ACGTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGGGAAAG
CCGACGTACTGCTTCTTCCTGGACGTGAAAAAGGCATACGACACCGTATG
GAGAAATGGGTTGTGGAAACAACTGTCCAAATACGGGATCAAGGGGAAAA
TGTGGAGAGTGCTGAAGAAGATGACAGAGTGCACGAAAAGCGCGGTCATG
CTAGACGGAGAACTGTCAAAATTCTTCGACATTGAGCAGGGGGTCCCACA
AGGTTGCACGCTGTCCCCAACATTGTTCCAGGTGTTCATCAACGATCTGT
TGGAAGTCGTAGAGGCAGTCCGGAAGGGAGCAAGAGTAGGGGACACGGAA
ACGTCGGTGTCAGGAATGCTGTCNGGTCATGCTAGACGGAGAACTGTCAA
AATTCTTCGAGATTGAGCAGGGGGGCCCACAAGGTTGCACGCTGTCCCCA
ACATTGTTCCAGGTGTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGT
CCGGAAGGGAGTAAAAGTAGGGGACACGGAAACGTCGGTTTCAGGAATGC
TGTTTGCGGATGATTTTGTCGGTATGTCGGACACCCCTGAGGGACTGCAA
CTGCAAATTGACGCGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGC
CAACGTTCAGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGAAC
CAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGGAC
CAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTGGAATGC
ACACATGTCCAAGGTAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGC
ACCCAATACTCGCAAACCGGCACCTCGATACACGCATCAAATTGACGGTT
TTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAGAGGTATGGGA
AGGAAATAAGGAGGTAGTGAAAGAAGTCGAGGCGGCCTAGATGAAAGCAG
CGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGCGCACAAGTAATGCAGTCGTGAGGGCAGAATT
GGGGATCCAATCCCTACGGTCGGAAAGAGACGCGAGGAAGCTGACATGGA
AGTATCGCATGTACGGGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGG
GAGGCGAAGTGAGACAGCAACATAGAGGGGTAGACAACCCACGGAATGGG
TCAAGGTTGTAGAGGATGTATGGAAGGGGCTCGACCGACGAAGATGAAAC
GCCGGAAACGGAGGGTCTACAGGGGTTCGAGGAGAAGATATCTGTTGCTT
GTGCCGAGAGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGTGTGACATGGACAAGT
TTGGTAAATTAGACAACAGCGAAAAAACGATCGCGGTAATTGGGGATAGA
TGGTGGGCACAAGAGGCCGTAGAGGACGGGGATAAGATGTGCAAGGAATT
TTTATGTAGTTTGTGGCAGAAACGTAAAGAGCTCCCAAATGTTGGTGGTG
TCTCTAGTAGGGGTAGGAACGGTGCTCCGTCTCGAAAGGGACGCGCGGTC
AATGGTCAAATGACTATTGCAAGCAACAAATGA back to topCoding sequence (CDS) from alignment at Scaffold_38:449975..453457- >EsuBft123_25a-0001 ID=EsuBft123_25a-0001|Name=EsuBft123_25a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2160bp|location=Sequence derived from alignment at Scaffold_38:449975..453457- (Ectocarpus subulatus male Bft15b) ATGATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTTGGGACGAAGTAGTGCAGAAGGCCAACGGAGGCCTGGA GGGAAACGTCAAGCAGATGTGGGAAGGGATTAGTGGAATGGTAAAAAAGA CCGCGCAAGGGGGGGATACAGGGGTCGCAACTTTGCGAGGTGTGAACGGT GGATTAGTCACTAGTGGGAAGGGAAAAAGGGAAGTTCTAGCAAGACACTT CAAGAGACTTGGAGTGCCCTCGGAGAATGAAGCTTTTGACCAAGCGTTTA AGAAGGAGGTGGACGCATGGGCCCAAAAAGAAGAAGAGACATCGAAGGCA GACGTTGGGAACGTAGAACTAGAAAAGGAGTTCACTGAGGACGAGGTTGA GGCGTGTGTGAACAAGCTGAAGTGCCACAAAGCAGCAGGAGCGGATGGGA TAGTCAACGAGTTCATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATG GTACTGCTATACAATTGGGTGTGGAAAAACGAGTATACGCCAAGTAGATG GAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAAGGAGACAAGACTGACC CAGGAAACTACAGGGGGATCACACTGTTGAACACAGTAGGAAAAGTGTTC TGTAAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAACATAG CATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACC ACGTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGGGAAAG CCGACGTACTGCTTCTTCCTGGACGTGAAAAAGGCATACGACACCGTATG GAGAAATGGGTTGTGGAAACAACTGTCCAAATACGGGATCAAGGGGAAAA TGTGGAGAGTGCTGAAGAAGATGACAGAGTGCACGAAAAGCGCGGTCATG CTAGACGGAGAACTGTCAAAATTCTTCGACATTGAGCAGGGGGTCCCACA AGGTTGCACGCTGTCCCCAACATTGTTCCAGGTGTTCATCAACGATCTGT TGGAAGTCGTAGAGGCAGTCCGGAAGGGAGCAAGAGTAGGGGACACGGAA ACGTCGGGGGGCCCACAAGGTTGCACGCTGTCCCCAACATTGTTCCAGGT GTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGTCCGGAAGGGAGTAA AAGTAGGGGACACGGAAACGTCGGTTTCAGGAATGCTGTTTGCGGATGAT TTTGTCGGTATGTCGGACACCCCTGAGGGACTGCAACTGCAAATTGACGC GGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTCAGAAGA GTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGA TGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGGACCAGTACACATACCT CGGAGTAGAGATCGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGG TAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCA AACCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAAT CGTACCGCCGCTAGAGTACGCCGGAGAGATGAAAGCAGCGAAAANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGCGCACAAGTAATGCAGTCGTGAGGGCAGAATTGGGGATCCAATC CCTACGGTCGGAAAGAGACGCGAGGAAGCTGACATGGAAGTATCGCATGT ACGGGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAACGAA AAAACGATCGCGGTAATTGGGGATAGATGGTGGGCACAAGAGGCCGTAGA GGACGGGGATAAGATGTGCAAGGAATTTTTATGTAGTTTGTGGCAGAAAC GTAAAGAGCTCCCAAATGTTGGTGGTGTCTCTAGTAGGGGTAGGAACGGT GCTCCGTCTCGAAAGGGACGCGCGGTCAATGGTCAAATGACTATTGCAAG CAACAAATGA back to top
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