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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G8K1 |
| ProteomeId | EsuBft1238_4 |
| Protein domains | IPR015353 |
| Protein domains | IPR001214 |
| Protein domains | SSF82199 |
| Protein domains | G3DSA |
| Protein domains | PTHR13271 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | ribosomal lysine n-methyltransferase set10 os:schizosaccharomyces pombe (strain 972 atcc 24843) gn:set10 pe:3 sv:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2244 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | KOG1337@1|root,KOG1337@2759|Eukaryota |
| Ec32 ortholog description | SET domain and Rubisco LSMT substrate-binding domain protein |
| Ec32 ortholog | Ec-14_003300.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K19199 |
| KEGG Reaction | R03875,R04866,R04867 |
| KEGG Pathway | ko00310,map00310 |
| EC | 2.1.1.43 |
| Description | peptidyl-lysine monomethylation |
| COG category | I |
| BRITE | ko00000,ko00001,ko01000,ko03036 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1238_4a-0001 ID=EsuBft1238_4a-0001|Name=EsuBft1238_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2244bp|location=Sequence derived from alignment at Scaffold_510:296347..300559- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGATACCCCCACCGAGGAAGGATCTGATTCGCCAGCACGAGGGGCAGT CAGCGAAGAACAGGAGTTTTTGCGATGGCTCCGGAGCCATGGAGCTGTGA TCGACTGCGTGGAGTGGCCGTCGTCGGAGACTGAGAGTGGGGTTCGCGGA GCAGTGGCGAGGAGAGACATCGCTCCAGGGGATCACATGGTCATCATCCC ACATGCCCTCATGATGTCCGAGTTCCACGCCAAGGCCGACCCGAAATATG GCCATGTCCATCGTCTCAACACCCGCCTCCTGGGCAGCGACAACGGGCTC GCCCTCTACATCATGCAGGAAATCTTGAAGGAGGAGCGGTCGTTCTATTG GCCCTATCTTCGCATGCTACCCACCCCTTGCAACCTCCGGAACTGGAACA GAGAAAGCCTGCTCCTCCTGCAGGACCACAAGCTAGTTCGAAGGACGGCC GCCAGGGGTCGGCAGCTCCTGGCTCTGTACCGTGAGACGATCGAGTTTCT ATCGAGCAGCTACCCGGATCTGTACACAGTGAGTCGGAGGTTCGACTTTT GGCATCCAGAGTCGCGTTTGTTGCGCTTGAGAGTATGGTGCATCTATCCA TGCGCACCATGTGCTGACCGGTACACGTTCGAGTTGTTCGATTTTGCGTG GACAACCATACAGGCAAGAGCCTTTGGAAAGCGACTGAAGAGCTCGGCTC TTGTGCCGTTCGCGGATTGCCTTAACCATGGCAACGTCCAGACCAAGTAT GACTTCGACGTCGAACGGAATGGAACCTTTCGGCTCTTCCCTTCCGGCAA CAACCGCTACCCGAGGAACTCCGAGGTTCTCAACAGTTACGGTCGGAGGG CCAACGACAATCTTCTTCTCGACTACGGCTTCGCTATGCTCGACAACGAG TGGGATACAGCTGAGGTGACTTGCTTTCTCCCTCCGTCCCACGGCCAATC GCCGCTCGACCGGAGAAGGAAAGCGTGCTTGCTCGCGAGCGGGCAACACA CCGTTCGAATGCTGCGGGTGCATCGTGACGTCTGGCCAGAAGAGTTGCTA CGATTTTGTCGCTGTGCGTGCCTCACCGCACCCGAGCTGGACAACCTCGA GGCACGGGGAGGGCAACAGGCAACAATGGCATCACAAAGCACCCCTTCCG ACGCGATGCGACAGCGAGGTATCGCCGGCACTGTTGAGCCCACCGCCGCG GCGGTACCACCATACCAGGACCTGTGTCGGTGCGCCCTGCGCTCTTCAAA ACAGGCAACAAGAGGCAAAGCCGAGGGCGGCAGCGGCAGTGGTGGCAGCG GCGACCGCACGTCGACCAGAGGGACTACTGCAGCCCCTCCCTCCTCCTCA TTGCCATCATGCGGGAAGGCTCGTGAGGATACCATCAACAACAACCACAA CATTGGCGATGACGATACTCTTCGTGAAGGTCTATCTGTACACGCGTCTA AGTGCACCCTTCCTCTGCGAGACGAACACGAAGAAGGAAACGGGGATCGA GGGGATCGAGGAGCCGGGGCCGGGGCAGAGGAGGAAGGGCAACAAGACGG CGATGACCCCAGCGGCGCGGGAGGAGCAGGAGGGAAACGAGGAGGTGTAG ACAGCCCCGACGAAAATCTCGACGCCTCAGGCTGTCGTTTCCCGTGCAGG GCGCTAACGGCGCAGAACGAGGTCGCGGCGCTCACCGAGGCCGTCAAGTA CCTCGCCCAAGCCAGGGACAACTACCCAACCACCCTGGAGTACGATGAGG CAAAACGCCTACCGGGAAGCACGAACATCACCGGACTCCTCACCGGAGCT GGTAACAGCATTAATCTACCGAATCACGGTCAAGCGGATTCTAGCGCGGC AACTAGAGATGGCCGAAGCAGCGATTGCGACATCGCTGCTGTGCGGGATC AGTTTCAGTCCTCGGACGAGAATGGCGAGGGCGTCGGGCACGAGAATGGG CCGTCGATGGTATCTGCTCCGGTTTCTTCATCCCGCTTGGACCATCTCCT GGCCCCCCCACCTTCGCCACCGTCACGCCTGTCGTCGCCGCCGCTGTCAA CCCGGGCATCATCGACGACCGGCGGCGGCATCGAAAACGAATGCCACCAG CATCACCTTCAGAGCCCTCGTTTTTCCCTGGCAACAGGGATCGATTCGCC GTCCTTCGTATCGTACTTGGCGGACGTCGAGAGCGTGATAGTCTACAAAA GGGAAGCTGCTTCCGCCGCCGCTGCAGCGTACCATCCAGAATGA back to topprotein sequence of EsuBft1238_4a-0001 >EsuBft1238_4 ID=EsuBft1238_4|Name=EsuBft1238_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=747bp
MDTPTEEGSDSPARGAVSEEQEFLRWLRSHGAVIDCVEWPSSETESGVRG AVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGL ALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTA ARGRQLLALYRETIEFLSSSYPDLYTVSRRFDFWHPESRLLRLRVWCIYP CAPCADRYTFELFDFAWTTIQARAFGKRLKSSALVPFADCLNHGNVQTKY DFDVERNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNE WDTAEVTCFLPPSHGQSPLDRRRKACLLASGQHTVRMLRVHRDVWPEELL RFCRCACLTAPELDNLEARGGQQATMASQSTPSDAMRQRGIAGTVEPTAA AVPPYQDLCRCALRSSKQATRGKAEGGSGSGGSGDRTSTRGTTAAPPSSS LPSCGKAREDTINNNHNIGDDDTLREGLSVHASKCTLPLRDEHEEGNGDR GDRGAGAGAEEEGQQDGDDPSGAGGAGGKRGGVDSPDENLDASGCRFPCR ALTAQNEVAALTEAVKYLAQARDNYPTTLEYDEAKRLPGSTNITGLLTGA GNSINLPNHGQADSSAATRDGRSSDCDIAAVRDQFQSSDENGEGVGHENG PSMVSAPVSSSRLDHLLAPPPSPPSRLSSPPLSTRASSTTGGGIENECHQ HHLQSPRFSLATGIDSPSFVSYLADVESVIVYKREAASAAAAAYHPE back to topmRNA from alignment at Scaffold_510:296347..300559- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1238_4a-0001 ID=EsuBft1238_4a-0001|Name=EsuBft1238_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4213bp|location=Sequence derived from alignment at Scaffold_510:296347..300559- (Ectocarpus subulatus male Bft15b) ATGGATACCCCCACCGAGGAAGGATCTGATTCGCCAGCACGAGGGGCAGT
CAGCGAAGAACAGGAGTTTTTGCGATGGCTCCGGAGCCATGGAGCTGTGA
TCGACTGCGTGGAGTGGCCGTCGTCGGAGACTGAGAGTGGGGTTCGCGGA
GCAGTGGCGAGGAGAGACATCGCTCCAGGGGTGAGAGAATGTAATTTTAC
GTGTTATTCTGCGTGCTGTATGCACAGCAGTGCTACATGTACAGTCTATC
CTTCAGCCGTACACATCATCATCGGCCACGGACCCGATACTTTTGCCTCT
ACCGCTGCTCCAACTTGCAGGCGTAGATTGGGGTGTTGCCGCTTGGAGGT
CACGTAAGACCCTTTGCTTTGCCAACAAGTGCACTTGCGCCGCAACTCAC
CAGATCCCAAGCAAAGACTTTATCTCAACTCCGTATCGACGCTGTCCGTT
TTCGCCGTCGACATGGTCATGTACGGCAAACGATGCAACCTGATGCCCCG
GCCTTTTTCCCTACGTTTCATTGAATGCAACTAAAACAGGATCACATGGT
CATCATCCCACATGCCCTCATGATGTCCGAGTTCCACGCCAAGGCCGACC
CGAAATATGGCCATGTCCATCGTCTCAACACCCGCCTCCTGGGCAGCGAC
AACGGGCTCGCCCTCTACATCATGCAGGAAATCTTGAAGGAGGAGCGGTC
GTTCTATTGGCCCTATCTTCGCATGCTACCCACCCCTTGCAACCTCCGGA
ACTGGAACAGAGAAAGCCTGCTCCTCCTGCAGGACCACAAGCTAGTTCGA
AGGACGGCCGCCAGGGGTCGGCAGCTCCTGGCTCTGTACCGTGAGACGAT
CGAGTTTCTATCGAGCAGCTACCCGGATCTGTACACAGTGAGTCGGAGGT
TCGACTTTTGGCATCCAGAGTCGCGTTTGTTGCGCTTGAGAGTATGGTGC
ATCTATCCATGCGCACCATGTGTATGCCACACGCACGTCAGGCACAAGCA
TGGAATAGTCGATAATGTCGGACTCACTAACGTCATTGCTTCTCGCCCCT
CATATCACAAGCAACGAGACCACCCCATTCGCTTAACTAGCCATGGATTT
CATGTCCCCTATACTTCCGTCGGTGCCCTCCCCCCCCCGGAACCGTCAAC
GCTGTCAACAGGCTGACCGGTACACGTTCGAGTTGTTCGATTTTGCGTGG
ACAACCATACAGGCAAGAGCCTTTGGAAAGCGACTGAAGAGCTCGGCTCT
TGTGCCGTTCGCGGATTGCCTTAACCATGGCAACGTCCAGACCAAGTAAG
CAAACAAGTGTTTCCGTACCGTAACCGAAGCATGTATCTCATACCGCAAC
ATACAGTCGAGAAACACTGTCGTCGACCCCATTGCCTCGATCAACGATAC
CCCCCCCCCCCACGCCGTCCATCCCAGTCGGGGGTACGTAGCACACGTGT
GTGGGGACTTTGCTTTCGTTTACGTAGAGTATTGACTAATACTTGGAAGT
ATCTCGAAAACAGGCTGCTCACCCTTACCCTTTGCAGTGCGGGGAGCTGT
GCTGCACAACGCTATTGGTTGTCTACGGCTAGAAGGGTAACCTCTTCCCA
TGTAAACCTGACAATCCTGCAAAAAGGTATGACTTCGACGTCGAACGGAA
TGGAACCTTTCGGCTCTTCCCTTCCGGCAACAACCGCTACCCGAGGAACT
CCGAGGTTCTCAACAGTTACGGTCGGAGGGCCAACGACAATCTTCTTCTC
GACTACGGCTTCGCTATGCTCGACAACGAGTGGGATACAGCTGAGGTGAC
TTGCTTTCTCCCTCCGTCCCACGGCCAATCGCCGCTCGACCGGAGAAGGA
AAGCGTGCTTGCTCGCGAGCGGGCAACACACCGTTCGGTACGTGCTGTGC
GCGCGCTAGATATCTCTGAAGTGTCAGCTGTTTCGGCCTCACACAGAATT
TGTCTTGGCCAAGTGCTCGTAAACGCGTTGGTTGGCGCTCACAACGCAAC
AGTCTCGCTTCCTAGGACAACAGACTTTGCTTGGGTGGGCGACATGAGCG
AGCGGCGCCGCACACGGCCAGGCCCAGTGCCTGCTGCCGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAATTTTCACCGCCTG
CCAACACTTCATCTCGGTTGTATACCTCTGCACGTCAATATGGATAGCAC
TGAGGGTAACATACGTCGCTTCATGACCATAATGTTTCTACCCTTTCCGC
ATGCATCGCACACTCGGTATTAATATCACTTCTAGGCCGTCGGCCGAACT
GTGTATCATCCTCCTCCCTTCCCCCCTGCCACCATCTTTCGCCTCTCCCA
TTGCAGAATGCTGCGGGTGCATCGTGACGTCTGGCCAGAAGAGTTGCTAC
GATTTTGTCGCTGTGCGTGCCTCACCGCACCCGAGCTGGACAACCTCGAG
GCACGGGGAGGGCAACAGGCAACAATGGCATCACAAAGCACCCCTTCCGA
CGCGATGCGACAGCGAGGTATCGCCGGCACTGTTGAGCCCACCGCCGCGG
CGGTACCACCATACCAGGACCTGTGTCGGTGCGCCCTGCGCTCTTCAAAA
CAGGCAACAAGAGGCAAAGCCGAGGGCGGCAGCGGCAGTGGTGGCAGCGG
CGACCGCACGTCGACCAGAGGGACTACTGCAGCCCCTCCCTCCTCCTCAT
TGCCATCATGCGGGAAGGCTCGTGAGGATACCATCAACAACAACCACAAC
ATTGGCGATGACGATACTCTTCGTGAAGGTCTATCTGTACACGCGTCTAA
GTGCACCCTTCCTCTGCGAGACGAACACGAAGAAGGAAACGGGGATCGAG
GGGATCGAGGAGCCGGGGCCGGGGCAGAGGAGGAAGGGCAACAAGACGGC
GATGACCCCAGCGGCGCGGGAGGAGCAGGAGGGAAACGAGGAGGTGTAGA
CAGCCCCGACGAAAATCTCGACGCCTCAGGCTGTCGTTTCCCGTGCAGGG
CGCTAACGGCGCAGAACGAGGTCGCGGCGCTCACCGAGGCCGTCAAGTAC
CTCGCCCAAGCCAGGGACAACTACCCAACCACCCTGGAGTACGATGAGGC
AAGTACACCACGTCGAACTCTGATTTTCATTCTTTTCCCGTCCCACCAGT
CTCAACCTCGCGGCATGTTCATGTTTGAACCACGGAGGGGATACTACGGG
CACAGACCTGTTTTCAACACCGAGGATATCCCGGGTCAATCATGATGACA
AAGAAGCAGCTCAAGAACTGAAGATTTGTTTGTAAATTTGTGCCCTGCTG
ATGCTCGTACGAATCTCAACGACGCCACAACACAGGGGTGCCCAATCCTA
GTTCGCGCCCGACACTCGAATCGGGGCACCACGAGACCGGATTCACCGAA
CCTACCAGAAGCAAGAACAAGTTCCGTTGCATATCTGTCCTGTGTCTTCT
TCGACCTCAGAACGCCTACCGGGAAGCACGAACATCACCGGACTCCTCAC
CGGAGCTGGTAACAGCATTAATCTACCGAATCACGGTCAAGCGGATTCTA
GCGCGGCAACTAGAGATGGCCGAAGCAGCGATTGCGTTTGTTCAGGTGAA
AGAACATGAGAGTTTTATTGCCTCCGTGTGTAGTGCGAGCGCTCTGCCGG
CTGCCTGGCACAGAGGTGTCGCCTTCGGCTGGTCACGCGGGCGGCGCGAT
ATGCGCCAAGAAGTACATGCCACCAAGAATTGCCGTATGATTTGTGTGGG
TTGCATGGGAAGGCAATCGAAATCCAACCACCCTTTGCCTTCATCCTTAG
CGCGATACACCCCTCTCTCCTGCTGCTGAAAATGCCCCATCTACCAGGAC
ATCGCTGCTGTGCGGGATCAGTTTCAGTCCTCGGACGAGAATGGCGAGGG
CGTCGGGCACGAGAATGGGCCGTCGATGGTATCTGCTCCGGTTTCTTCAT
CCCGCTTGGACCATCTCCTGGCCCCCCCACCTTCGCCACCGTCACGCCTG
TCGTCGCCGCCGCTGTCAACCCGGGCATCATCGACGACCGGCGGCGGCAT
CGAAAACGAATGCCACCAGCATCACCTTCAGAGCCCTCGTTTTTCCCTGG
CAACAGGGATCGATTCGCCGTCCTTCGTATCGTACTTGGCGGACGTCGAG
AGCGTGATAGTCTACAAAAGGGAAGCTGCTTCCGCCGCCGCTGCAGCGTA
CCATCCAGAATGA back to topCoding sequence (CDS) from alignment at Scaffold_510:296347..300559- >EsuBft1238_4a-0001 ID=EsuBft1238_4a-0001|Name=EsuBft1238_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2244bp|location=Sequence derived from alignment at Scaffold_510:296347..300559- (Ectocarpus subulatus male Bft15b) ATGGATACCCCCACCGAGGAAGGATCTGATTCGCCAGCACGAGGGGCAGT CAGCGAAGAACAGGAGTTTTTGCGATGGCTCCGGAGCCATGGAGCTGTGA TCGACTGCGTGGAGTGGCCGTCGTCGGAGACTGAGAGTGGGGTTCGCGGA GCAGTGGCGAGGAGAGACATCGCTCCAGGGGATCACATGGTCATCATCCC ACATGCCCTCATGATGTCCGAGTTCCACGCCAAGGCCGACCCGAAATATG GCCATGTCCATCGTCTCAACACCCGCCTCCTGGGCAGCGACAACGGGCTC GCCCTCTACATCATGCAGGAAATCTTGAAGGAGGAGCGGTCGTTCTATTG GCCCTATCTTCGCATGCTACCCACCCCTTGCAACCTCCGGAACTGGAACA GAGAAAGCCTGCTCCTCCTGCAGGACCACAAGCTAGTTCGAAGGACGGCC GCCAGGGGTCGGCAGCTCCTGGCTCTGTACCGTGAGACGATCGAGTTTCT ATCGAGCAGCTACCCGGATCTGTACACAGTGAGTCGGAGGTTCGACTTTT GGCATCCAGAGTCGCGTTTGTTGCGCTTGAGAGTATGGTGCATCTATCCA TGCGCACCATGTGCTGACCGGTACACGTTCGAGTTGTTCGATTTTGCGTG GACAACCATACAGGCAAGAGCCTTTGGAAAGCGACTGAAGAGCTCGGCTC TTGTGCCGTTCGCGGATTGCCTTAACCATGGCAACGTCCAGACCAAGTAT GACTTCGACGTCGAACGGAATGGAACCTTTCGGCTCTTCCCTTCCGGCAA CAACCGCTACCCGAGGAACTCCGAGGTTCTCAACAGTTACGGTCGGAGGG CCAACGACAATCTTCTTCTCGACTACGGCTTCGCTATGCTCGACAACGAG TGGGATACAGCTGAGGTGACTTGCTTTCTCCCTCCGTCCCACGGCCAATC GCCGCTCGACCGGAGAAGGAAAGCGTGCTTGCTCGCGAGCGGGCAACACA CCGTTCGAATGCTGCGGGTGCATCGTGACGTCTGGCCAGAAGAGTTGCTA CGATTTTGTCGCTGTGCGTGCCTCACCGCACCCGAGCTGGACAACCTCGA GGCACGGGGAGGGCAACAGGCAACAATGGCATCACAAAGCACCCCTTCCG ACGCGATGCGACAGCGAGGTATCGCCGGCACTGTTGAGCCCACCGCCGCG GCGGTACCACCATACCAGGACCTGTGTCGGTGCGCCCTGCGCTCTTCAAA ACAGGCAACAAGAGGCAAAGCCGAGGGCGGCAGCGGCAGTGGTGGCAGCG GCGACCGCACGTCGACCAGAGGGACTACTGCAGCCCCTCCCTCCTCCTCA TTGCCATCATGCGGGAAGGCTCGTGAGGATACCATCAACAACAACCACAA CATTGGCGATGACGATACTCTTCGTGAAGGTCTATCTGTACACGCGTCTA AGTGCACCCTTCCTCTGCGAGACGAACACGAAGAAGGAAACGGGGATCGA GGGGATCGAGGAGCCGGGGCCGGGGCAGAGGAGGAAGGGCAACAAGACGG CGATGACCCCAGCGGCGCGGGAGGAGCAGGAGGGAAACGAGGAGGTGTAG ACAGCCCCGACGAAAATCTCGACGCCTCAGGCTGTCGTTTCCCGTGCAGG GCGCTAACGGCGCAGAACGAGGTCGCGGCGCTCACCGAGGCCGTCAAGTA CCTCGCCCAAGCCAGGGACAACTACCCAACCACCCTGGAGTACGATGAGG CAAAACGCCTACCGGGAAGCACGAACATCACCGGACTCCTCACCGGAGCT GGTAACAGCATTAATCTACCGAATCACGGTCAAGCGGATTCTAGCGCGGC AACTAGAGATGGCCGAAGCAGCGATTGCGACATCGCTGCTGTGCGGGATC AGTTTCAGTCCTCGGACGAGAATGGCGAGGGCGTCGGGCACGAGAATGGG CCGTCGATGGTATCTGCTCCGGTTTCTTCATCCCGCTTGGACCATCTCCT GGCCCCCCCACCTTCGCCACCGTCACGCCTGTCGTCGCCGCCGCTGTCAA CCCGGGCATCATCGACGACCGGCGGCGGCATCGAAAACGAATGCCACCAG CATCACCTTCAGAGCCCTCGTTTTTCCCTGGCAACAGGGATCGATTCGCC GTCCTTCGTATCGTACTTGGCGGACGTCGAGAGCGTGATAGTCTACAAAA GGGAAGCTGCTTCCGCCGCCGCTGCAGCGTACCATCCAGAATGA back to top
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