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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G8J9 |
| ProteomeId | EsuBft1238_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 147 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.21e-44 |
| EggNOG OGs | 2E19I@1|root,2SCNU@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1238_2a-0001 ID=EsuBft1238_2a-0001|Name=EsuBft1238_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1470bp|location=Sequence derived from alignment at Scaffold_510:283419..290669- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGGAGAGGAGAGGAGTCACCAGGTCACCTTCGGTGCCACAAGCTCTGCTG CTGCGACGGAAGCCACGCAAAATATCAATCGCAACCGAGCTGTACCAGCT ACACGGCTAGCGTTTTCTTTCTGCAGGAGAAAATGTCGCTAGCGGGGCTG GTCGGGGGCTATGGAAGCGACGATTCAGACAACTCCAGCAACAATAGCTC ATCGTCTGCCAAGGGGGACAAGGCCGACGACCAGGACGGGGACGGGGGGG CGGGAGGAAGCGGGAGGGAAGAAAAGAGGGCTGGTGCTTCCTCCGGCGGT GGTATCGGCTCGTGCAACGAGAAGGGTTCCGGCAACAGAAGCAACAGTAC CAGCAGCGACGACGACAGCAGCGGCGAGGATAGTAGCGATGCGGAGGATG CAGCAGCAGCAGGAGGAGGAGCGCGAAAAAGCGTCAAGGCGAACAGACGA AATCCTTCGCCAGCTGGCAACAGCGGCGGCGGTAGTCTGCTCCCGTCCGT GAGCGACCTCTTCAGCAGCACGGCGGGGCCGGACTTCCTCAACGCACCGG GAGCCGGCCAGGATTTCATCGTCAAGGCCATGAAAAAGGAAAAGAAGAAG CAAACGGCAGCAGAGGCGACAACAGGCGACCCCACCGCAAATGCGGCGAC AGCAGCAGCAGCAGCAGCAGCAGGAGCAACAGCGAAACGGGAGAGGGACG TAGCGGCGGGGGTGAGGGGCACGGCGGTCGGGGTAAAGAAACCCAAGGGA GGGGCGGCGGGGCCCACGGGGCAGCCGGTGGACAAAAGAAAGGCGGCGGG TGGTAAGGAAAAGATCTCGGCGAAGGACAAGGTCAAGGGACAAAGATTAA AGGGGCAATCCGGGATCGGGTCGGACTTCCGAACATGGAAGAGCGATCTG GAGATGACCATGAGGCAGCAGTACGATTGAAAATAGTAATACGGTGTAGC ACGTTGTGGTTGAGAGCGTGACGCGCATTGTAGACAAATTACAAACGCTC GATAGAAATTGGAGTGCTGCAGTAGGAGGTTCGGTTGATATGGATAAGAA GCTGCAGATGCTCTTGCTGGAACGTGATGCATCCTGGGACCGACAGCAGT TGGTGCAAGCGGGTGTTGACCTTGATGCGGGCCGCTCTAATTCAATCCTT TCATTCTTGTGGGGCACCCTTTATTTATTCGCTCCTGATGAGTTCCAAAG TTCTGTCGAGCCAAGTGCCTCATTCGGCTTCGTTTGCGATGCCCTTCAGT TTGTTGTCGTTTGAGTCACAAGATTATGACGCGTTTTGCCAAACGTTTGT CTGGGCAAATGTGCAGCGTTTGTGACTCGAAGTGCACCGTTGACTCGACA TGGAGACAAGACGCACGTTGACTTTTGGTCAGCTGTCTTTCAGCAATAGA ACAAGCGTTTTACACACGAAAGAACGAGCTCGGTGATACAGCATTTGGTG GCTGGGTGGTTCGGTTACTA back to topprotein sequence of EsuBft1238_2a-0001 >EsuBft1238_2 ID=EsuBft1238_2|Name=EsuBft1238_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=265bp
MSLAGLVGGYGSDDSDNSSNNSSSSAKGDKADDQDGDGGAGGSGREEKRA GASSGGGIGSCNEKGSGNRSNSTSSDDDSSGEDSSDAEDAAAAGGGARKS VKANRRNPSPAGNSGGGSLLPSVSDLFSSTAGPDFLNAPGAGQDFIVKAM KKEKKKQTAAEATTGDPTANAATAAAAAAAGATAKRERDVAAGVRGTAVG VKKPKGGAAGPTGQPVDKRKAAGGKEKISAKDKVKGQRLKGQSGIGSDFR TWKSDLEMTMRQQYD back to topmRNA from alignment at Scaffold_510:283419..290669- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1238_2a-0001 ID=EsuBft1238_2a-0001|Name=EsuBft1238_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7251bp|location=Sequence derived from alignment at Scaffold_510:283419..290669- (Ectocarpus subulatus male Bft15b) TGGAGAGGAGAGGAGTCACCAGGTCACCTTCGGTGCCACAAGCTCTGCTG
CTGCGACGGAAGCCACGTGAGTTGATTGCAGATGAATGACCGGAAGCTGG
CCTCACTCGGCTTGCCCGTGATGTTTGATATTCAGGGAGATAACCGATGC
GCTGTGGCTGTGTTGGGTAAACCGGGTACAGTTGGCGCCCGCAGTTAAGA
AATATTTTGTTAAGAAATTGAGGCTCACTTTTTCACGAAAAATAAGAAAA
TAGGGTTAACATAGCTTAATCTGGGTCACAAAATAAGAAATGTCTCAAAA
AGATAGGAAGGGAGCGGGGGGCGCAAAAGGGTGACAACCCCCAATGTTCG
CCTCACGGAGCTTGCATCATAATGACGGGGTAGTTTTCGTTGTTGGGCAC
GTCAGCGTGCGGGTGAGGCATCATGCGGTGTTGATGCATTTGTTTAGTTT
CAGCCCTCACTCATGAGGGGGGTACAGGACCTTGTAGCGATAGCGAGACG
TTGCCGCTGGATACATTTCGCTTCTAGGGAGTGGCCTTACGTGCAGCCGT
CGGTAGTGAGAATCGGGGTTGAGTACGGAGGTCGAGGAAAGCAGTGCAAA
TCATTTGTATATTTGGAACGTTGTGTAGTATGCAAGCAGAGAAATAGTAA
GCAATTGCCGATTTAAGAAATTCAGCAGGATTTGGCTGCACGAAAAAATA
AGAAACTTGAAATAGGAAACTGAACGATATACGCTGAGTTTATAGCCCAA
AATAAGAATTCGAGGCTGGACCCGAAATAAGCGTTTCTTAACTGCGGGCG
CCAATTGTAGGCCGAAGCTTGTAGGTTTGTGGAGAAGGCAGCTCGGCCAG
TGAGGGCCGAGATGAGAAAGTCTTGTATTAGAAGGGAGAGGGGACAGCAG
AGAACACTCGTGTCCGAGGACCCGAAGACAAAGTCACAACACCCATCCGT
GACGCAATTCCGACCATTCATCGAATCTCCGTAGATCCATGTCCCATATT
CAACCATCTTTACTATGCTCCAAGAGTATATCTATCAACCCATCTGCTCC
TATGCATCGCAATGATACGGCAAGTCAATACAGTACCATTTTCGACGCAT
AACGTGGATCCTACTCCTCCATGACGAACAAACAACCAAGAACTCGATCA
TGCAAATGTTCCTCAACCCACAACGTCTTGTCTCATCGCCTTCGTTCCTT
CTCTGCAAAACGCTCTTCTTCTGGTCCATCCTTTTTCAGCACTTCGCCGC
AACGACACCCGCAAAGTACTTATGTCCCCCGCACAACTCAAAAGCATTAA
ACAACCCATTGAACCAAACCTATCTGTGAAAGTCATCTTCATTTACTTCC
CAAAACACGGATCAATTCGCAGAAATTCGCCTTCGTTGTCCTTCGATTAC
ATCCATCCATCCGTCTACAAGTCCGACCAAGACAACACAATTTTCTCAAA
AGGAAAAGCGGTTGTATATATATGTTTCATGTTTCGCGGATGCCCGCTTA
GCAGGTAAAACGAAGCTGAGCATGACATGAATCCTCTACTCTCACATTTC
CGATCAAACAACATCCATCCCCAAACATTCGTTCAGCGGTAAGATCATTT
GCGCAAAACATACGCGAGTTTTGTTCCTGTTGCTTCTCTCTAGAAATCTA
GCACCAGCTATAGTAAATTCCTTCCGAAAGAACAACGTGCCCCCCTGCTC
TGGGAGATCCGCCCCCCTGATTGTTGAAGGGGTCGGAAATCTGAACCACA
GACCAAAAGAACAACATTCGAAATTCATCCATTCGAAACTCAAGAAAAAC
AATCCTGCGGCAAATAAATCCCGACAAAACACCAAAACCAAATCAAATCC
AATGCCGAAACAACGTTCGCAAATCCGAATGCTAGAAACCAATCCAGTAC
CAAGGCCAAAATCCAATCCAATGCACCAAAACGGAACATTCGGAAACCCT
CCAATTCAATACCAAAACAATAACACTCGAAAGCCCTACATTTGCCGGCG
CATCAACCTCCAGCACTTAACCCAGGCTTGTTTGGTCGCTTGGCAACGAC
GTTGTAAAACAAGCCGCCGCCCCCCCCCGGTGTTTGTCATCGGGGTTAGG
TTTTCGTCGCTTGGCAACGACATTGTAAAACAAGCCGCCACCCCCCCGGT
GTTTTGCGATCGGGATTGGGTTTTCGTCGCTTGGCAACAACGTTGTAAAA
CAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGTTTTTTTTTT
TACCTCCGTTTTTTGTTTTGGCGGTAACCATAATGGTGGTCGAGTAGATC
ATGTTGTGCGGGGTCGAGAACCCTCACTCCGCGCAAGGGGGATGATCGCA
CCACGTTGTGTTGAAATGGTCAAGCACCCTCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACGCAAGGAAGTAAGCCAAGATGCCGAAACACCCTT
AGCAGGATGCAGCGCACCCTTCATGCGACAGCCGAATATCTCACGGCACT
ACGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTCAAGCACCCTCGAGGCAGTTACACAG
TGCTTACAACTGTCTCTGGAAGTGAAGCACCAGAAAATAAATTAACTCAT
ATGCAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGAACACC
CTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACGG
CGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTG
CTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGG
CATGCACGACTATGAGTACACCCCCCCAGCATATTTCGCACGCCTTCGCC
GCGGTCGCCTTCCGCCCTTGCATCTTTTCTGGCTGGCCGCGACTCGAGCT
TGGATGTTTGCGTCCGCCTGAAGAGGGGGAAGAGCACTTGTCGCTCCCGG
AGGATTGACTCGGCGGTGGTGCAGGGCAGGTCGCGCATTTGGAGGGGAAG
ATGGCGGCAGATTAGTTCCGAACAAACCAGCACTACTGAGGAGAATCACA
TACTACCAACATTCCCCCCGGCTCTGCACAATGNCTTTTCTGGCTGGCCG
CGACTCGAGCTTGGATGTTTGCGTCCGCCTGAAGAGGGGGAAGAGCACTT
GTCGCTCCCGGAGGATTGACTCGGCGGTGGTGCAGGGCAGGTCGCGCATT
TGGAGGGGAAGATGGCGGCAGATTAGTTCCGAACAAACCAGCACTACTGA
GGAGAATCACATACTACCAACATTCCCCCCGGCTCTGCACAATGGTGACT
GCAGCAGAAAAAGCAACAAATGAAACACACTTTCAAGTCGTCGGACCCTA
CTTGTGGAATGGTTTGTCTGAGATTACCGATCACTGCGACATTGCCACTC
AATAAGTAGCTGAATATCATCCTGAAACGGAGGTCGATCAATCCTCCATC
ACAAAATAATAATACAGCCGCTGCTCCTGGTCTAACCATAGGGTAATCAA
TCCTAAGTCAAAACCTTAAGATCTTGGAACCGCAATCTCACAACAAATAA
CAACCTCAAGACAATGTATACAATATTCGGAAATTAGCATTTCTTTCGTC
AATATTGTGGATTTTCAATCTGCAACACGGTGGAGGTACCAATCAATGTT
GCACGTCGCTGAGACTTCACACGTCTCTGGTACTCGTTGACACAACCAAG
GCATCGAAAGTTTTTGATCAGGTTAAAGCTGCTACCCAAAGAGAGTCCAC
ATAAAACGTTGATTACGCAATCTTGATCAGGCTAAACCTGCTGCTCAAAA
AGTAGCTACCAAAAAGCCCAGATAGAACGTTGATCACGCTGTTGCCGGGA
AGAGGAAGTTGGTCTCAGCACGGCTATCAGGAAGACAAAGCACAAAACCT
CGTCAATCACTGCATGACACTACGCACAATTATATTTCTACTGCCACGCC
ACACGCACACAGATCGTATCATCAGTTTCGAAACTGGCATCAGTTGTTGA
GGATTACTGGCAACCTAGGTTGGGTCTACCCATTTGCTACAGGTAGTCGG
CCTTTGACCGAGCGGTGGAGTTTGACGGCAGTACCGCACGACGTATGGTC
GCGTTTTGGTTGAGTAAGCGTTAGAGTTTGTCGGCATTACCGCGCGGCGT
ATTGCCGCGACTATGCTAGAGAAAGAGTAGGAGAGAGAGTTTGAGGGCAG
TGCCGGGTGGAGGTGGAGTTGGAGTAAGCGTTGGCGTTTGACGGCAGTAC
CGCACGGCGTAATGCCGCGTTTAGAATCTGACGGCACTATACAACCCCTG
TAGACGGCGGGGCGCAGCTGACGATGGCGCTGCTGTAGGTCTTGGGGGTG
CTGCTGCCGTGCAGGCCCTCGCCGTTGGTGGCCTCTTCGTCTGGTTGGGT
GTCGTCAGCCGCGCGTGCGGCTGCCCATAGGTGCTACCAATCTCTGGTTA
ACTCGTACCCAGTCACCCTCGACAAGTCGTTCAACGCTAGCGTGTTGGGT
AAACCGGGTAGGCCGAAGCTTGTAGGTTTGTGGAGAAAGGCAGCTCGGCC
AGTGAGGGACGAGATGAGAAAGTCTTGTATTAGAAGGGAGAGGGGACAGC
AGAGAACACTCGTGTCCGAGGACCCGAAGAGAAAGTCACAACACCCATCC
GTGACGCCATTCAGATCACTCATTGAATTTCCGAAGAAACCAAGTAGAAA
CTCCATGTTCCTCCGCAATTTACAAATTGCAATCTCCGTAGATCCATGTC
CCATATTCAACCATCTTTACTATGCTCCAAGAGTATATCTAACACGCTGG
TTGCGCCGCAGCAGCGGCGCCTGATGATGTCTGATGTTGTTTCTCTACAA
TAGCCTACAGCAATAGACGATACTGCTGTAGACTGTCTAGACTAGGTGGG
CACTTTGAAAGGCGTGTGGTTCAATCTCGCCAGATTGTGTGGTGCTATGG
ACGACATGAGACACCCGGATTCCCCTGACCTTGAACCACCTCTCAAACCC
GTATACAGCATACGACGCCGCCCCGACTCCCATAATTGACCTCTCTGCTG
TTCAGCCAGCGGGGGGTGCAACTCCATCACGCCGAGCATAAAACCTGGTT
ACGCGTAGAGTCCCTCACAGTTCTACACGATTGAACGAATTGCTCTTGTT
GTGCAACGCCACAATAACCAACACGCCTTGTACATGGTAGCGAAGTTCTA
CGTGCCTCGTCTGGGATGTCGCAGTCCAGCAGTCGTGATGCGGACATGCG
GACTACAGCAGCAGCAGTGATTAAATAGTCATCATTTTAACAAGTTGAGT
TGATTTGCATGTCCGGCACCACCGTGCCCAGGTTACCACTTGGCCGGAGG
TTATACGATGACTTGTTCAACGCTGGATGACTTCTTGCCAGTAGCTGCTG
AAGAACTGCAACATGAATCCTTGCCTAAACCTCCACGACCTGTAGACTTA
GCTTAACCCATTGCTGCTCGACATCCTCGCGCCCAGATTACACTGGAATT
ATGAGTTGATTCAATGCTGTGTTCGCCCCCCTCCCCCCGTATCGCAGGCA
AAATATCAATCGCAACCGAGCTGTACCAGCTACACGGCTAGCGTTTTCTT
TCTGCAGGAGAAAATGTCGCTAGCGGGGCTGGTCGGGGGCTATGGAAGCG
ACGATTCAGACAACTCCAGCAACAATAGCTCATCGTCTGCCAAGGGGGAC
AAGGCCGACGACCAGGACGGGGACGGGGGGGCGGGAGGAAGCGGGAGGGA
AGAAAAGAGGGCTGGTGCTTCCTCCGGCGGTGGTATCGGCTCGTGCAACG
AGAAGGGTTCCGGCAACAGAAGCAACAGTACCAGCAGCGACGACGACAGC
AGCGGCGAGGATAGTAGCGATGCGGAGGATGCAGCAGCAGCAGGAGGAGG
AGCGCGAAAAAGCGTCAAGGCGAACAGACGAAATCCTTCGCCAGCTGGCA
ACAGCGGCGGCGGTAGTCTGCTCCCGTCCGTGAGCGACCTCTTCAGCAGC
ACGGCGGGGCCGGACTTCCTCAACGCACCGGGAGCCGGCCAGGATTTCAT
CGTCAAGGCCATGAAAAAGGAAAAGAAGAAGCAAACGGCAGCAGAGGCGA
CAACAGGCGACCCCACCGCAAATGCGGCGACAGCAGCAGCAGCAGCAGCA
GCAGGAGCAACAGCGAAACGGGAGAGGGACGTAGCGGCGGGGGTGAGGGG
CACGGCGGTCGGGGTAAAGAAACCCAAGGGAGGGGCGGCGGGGCCCACGG
GGCAGCCGGTGGACAAAAGAAAGGCGGCGGGTGGTAAGGAAAAGATCTCG
GCGAAGGACAAGGTCAAGGGACAAAGATTAAAGGGGCAATCCGGGATCGG
GTCGGACTTCCGAACATGGAAGAGCGATCTGGAGATGACCATGAGGCAGC
AGTACGATTGAAAATAGTAATACGGTGTAGCACGTTGTGGTTGAGAGCGT
GACGCGCATTGTAGACAAATTACAAACGCTCGATAGAAATTGGAGTGCTG
CAGTAGGAGGTTCGGTTGATATGGATAAGAAGCTGCAGATGCTCTTGCTG
GAACGTGATGCATCCTGGGACCGACAGCAGTTGGTGCAAGCGGGTGTTGA
CCTTGATGCGGGCCGCTCTAATTCAATCCTTTCATTCTTGTGGGGCACCC
TTTATTTATTCGCTCCTGATGAGTTCCAAAGTTCTGTCGAGCCAAGTGCC
TCATTCGGCTTCGTTTGCGATGCCCTTCAGTTTGTTGTCGTTTGAGTCAC
AAGATTATGACGCGTTTTGCCAAACGTTTGTCTGGGCAAATGTGCAGCGT
TTGTGACTCGAAGTGCACCGTTGACTCGACATGGAGACAAGACGCACGTT
GACTTTTGGTCAGCTGTCTTTCAGCAATAGAACAAGCGTTTTACACACGA
AAGAACGAGCTCGGTGATACAGCATTTGGTGGCTGGGTGGTTCGGTTACT
A back to topCoding sequence (CDS) from alignment at Scaffold_510:283419..290669- >EsuBft1238_2a-0001 ID=EsuBft1238_2a-0001|Name=EsuBft1238_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=798bp|location=Sequence derived from alignment at Scaffold_510:283419..290669- (Ectocarpus subulatus male Bft15b) ATGTCGCTAGCGGGGCTGGTCGGGGGCTATGGAAGCGACGATTCAGACAA CTCCAGCAACAATAGCTCATCGTCTGCCAAGGGGGACAAGGCCGACGACC AGGACGGGGACGGGGGGGCGGGAGGAAGCGGGAGGGAAGAAAAGAGGGCT GGTGCTTCCTCCGGCGGTGGTATCGGCTCGTGCAACGAGAAGGGTTCCGG CAACAGAAGCAACAGTACCAGCAGCGACGACGACAGCAGCGGCGAGGATA GTAGCGATGCGGAGGATGCAGCAGCAGCAGGAGGAGGAGCGCGAAAAAGC GTCAAGGCGAACAGACGAAATCCTTCGCCAGCTGGCAACAGCGGCGGCGG TAGTCTGCTCCCGTCCGTGAGCGACCTCTTCAGCAGCACGGCGGGGCCGG ACTTCCTCAACGCACCGGGAGCCGGCCAGGATTTCATCGTCAAGGCCATG AAAAAGGAAAAGAAGAAGCAAACGGCAGCAGAGGCGACAACAGGCGACCC CACCGCAAATGCGGCGACAGCAGCAGCAGCAGCAGCAGCAGGAGCAACAG CGAAACGGGAGAGGGACGTAGCGGCGGGGGTGAGGGGCACGGCGGTCGGG GTAAAGAAACCCAAGGGAGGGGCGGCGGGGCCCACGGGGCAGCCGGTGGA CAAAAGAAAGGCGGCGGGTGGTAAGGAAAAGATCTCGGCGAAGGACAAGG TCAAGGGACAAAGATTAAAGGGGCAATCCGGGATCGGGTCGGACTTCCGA ACATGGAAGAGCGATCTGGAGATGACCATGAGGCAGCAGTACGATTGA back to top
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