EsuBft1205_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1205_4a-0001
Unique NameEsuBft1205_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_210contigScaffold_210:118596..126829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G243
ProteomeIdEsuBft1205_4
Protein domainsIPR001905
Protein domainsTMhelix
Protein domainsIPR024041
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsIPR018047
Protein domainsPTHR11730
Protein domainsIPR029020
Protein domainsTRANSMEMBRANE
Protein domainsCYTOPLASMIC_DOMAIN
Ownerapollo_admin@sb-roscoff.fr
Noteammonium transporter 1 member 2 os:oryza sativa japonica gn:amt1-2 pe:2 sv:1 [Automatic annotation]
Nb exon6
Max annot lvl2759|Eukaryota
Length3214
Hectar predicted targeting categoryother localisation
Evalue2.62e-301
EggNOG OGsCOG0004@1|root,KOG0682@2759|Eukaryota
Ec32 ortholog descriptionAmmonium/urea transporter
Ec32 orthologEc-09_003820.1
Date last modified2016-10-03
Date creation2016-06-14
Preferred nameamt-1
KEGG koko:K03320
KEGG TC1.A.11
DescriptionAmmonium transporter
Descriptionammonium transmembrane transporter activity
COG categoryU
BRITEko00000,ko02000
NoteGroisillier A., annotator
Cross References
External references for this mRNA
DatabaseAccession
GO0080181
GO0015843
GO0010311
GO0072488
GO0080167
GO0051258
GO0009506
GO0009737
GO0050794
GO0005515
GO0055085
GO0009624
GO0016021
TCDB1.A.11.2..
GO0015398
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4aEsuBft1205_4aEctocarpus subulatus male Bft15bgeneScaffold_210 118596..126829 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4a-0001EsuBft1205_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_210 120296..126722 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4a-0001-exonagat-exon-37489Ectocarpus subulatus male Bft15bexonScaffold_210 118596..120370 -
EsuBft1205_4a-0001-exonEsuBft1205_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_210 120771..120955 -
EsuBft1205_4a-0001-exonagat-exon-37487Ectocarpus subulatus male Bft15bexonScaffold_210 121267..122118 -
EsuBft1205_4a-0001-exonagat-exon-37486Ectocarpus subulatus male Bft15bexonScaffold_210 122527..122647 -
EsuBft1205_4a-0001-exonagat-exon-37485Ectocarpus subulatus male Bft15bexonScaffold_210 125377..125405 -
EsuBft1205_4a-0001-exonagat-exon-37488Ectocarpus subulatus male Bft15bexonScaffold_210 126578..126829 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4a-0001-exonagat-three_prime_utr-1965Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_210 118596..120295 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4a-0001-cdsEsuBft1205_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_210 120296..120370 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1205_4a-0001-exonagat-five_prime_utr-1290Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_210 126723..126829 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1205_4a-0001 ID=EsuBft1205_4a-0001|Name=EsuBft1205_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3214bp|location=Sequence derived from alignment at Scaffold_210:118596..126829- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TTTCTGTTCCTCTCCACACCTCTCTCCCCCCTCCTGTTCGTGCCCAAGCT
CAGCACAACCCACACTCGCTTTTTCTCCCCGTCTCTCCGAAGACGAAGGC
GCGAACTATGAATTCCACGACCACCTCGACCGCCTCGCTGACCTCCTCGG
ACCCCGCGTATGCCCTGCAGCCTGCAACGCTCGGTGATGTCCAATCGCTT
GGGGATGAGATGGATATATTCTGGTTGATGTTTGGCGCCATCCTCGTCTT
CTTCATGCAGACTGGATTCGCCATGCTGGAGGTCGGTTCCGTGTCCATCA
AGAATACCAAAAACATCTTGATCAAGAACATTGGCGACGCCTCCCTGGGC
GCCATCTGCTGGTGGCTGTTAGGCTACGGTGTCGCCATGGGAGATACTAA
GGGTCGTTTCATCGGAAGCAACGCCTTTGCCCTCAAGGGCGACCACTTCG
AGGCGGACGACGGCACCCTCACCAACGGCTACAATTACGCCATGTGGCTG
TTCCAGTGGGCCTTCGCTGCAACCGCCGCCACCATCGTGTCGGGGGCTGT
GGCCGAGCGCGTGTCCTTCAACGCGTACATCATCTACTCTATTGTCCTGA
CGTCGTTCATCTACCCCGTTGTCGTGCACTGGGGCTGGGGCGGCGGGTGG
GCCTCCGCCTGGATGGAAGAGGACCTCCTGTTCGGCTGCGGTGTCATTGA
CTTCGCCGGTTCTGGCGTCGTCCACATGACCGGCGGCCTCGCCGCACTCT
GCGCGGCCATCGTCGTGGGACCCCGCACCGGCCGCTTCAACGAGGATGGC
ACCTCCAACTCCCTCCCCCAGCAGTCCGCGGTGCTCCAGTCGCTCGGCAC
GCTCATCCTCTGGTTCGGATGGTATGGGTTTAACGGTGTGTCCACACTCG
CCATCAACGGCCTTGCCGGAGTTGCCGCGAAGACTATGGTGACCACCACC
ATCTCGGCTGCCTTCGGTGCCGTCACGACTGTCCTCCTGGGCAAGCTTCA
CGTCGGGTATTGGGACGCAGGGGCCGCCAACAACGGTCTCCTTGCAGGTC
TCGTGGGCGTCACCGCGGCCTGCTCTACCTGCGAGCCCGAGGGCGCTATG
GTGATAGGCATCATTTCCGGCTTCGTGTACACCTACGCCTCCAAGATGCT
TGTGAAGTTCAAGATCGACGACGTCGTGGACGCCATCCCTGTCCACTGCT
TCTGCGGAGCGTGGGGTGTGTTCGCCGCGTCGCTCTTCGCGACAAAAGAC
AACTATAGCGCGGCTTACTACGACCGCGCGGACAAGTGCGCGGGTGTCTT
CTACGGCGGCGATGGAAATGCCGTCGCTGCCAACGTGGTGTTCATTCTGG
CCGTCATCGCATGGGTCGTGGTTACGTGCTTGGCCCTGTTCGTAGGGATC
AACGCTGTCGTCGGTATGCGTGTGGACAAGGAGATGGAGCAAATTGGCAT
GGACGACTCCAAGCACGGAGGCCAGACCTACCCAGAGATGCTGAAGGGGG
CCACCTCGGCGTAAATTTTCTTTTTGGTTTCGCCAATGCCACGCGGCGGC
CACCTGGTGATCGTCCCACGACCCTGGGTCCCGATCTGTTGCAACTCAGA
TGCAAGAGGCCGTCAGTGACGAGTCAGCCGGCTTCTCGCGCGCACTTGAA
TGCGTGGGCGAACGCTGCTGGGCTTGGTTGTAGAAGGAATAATGAAATGT
AGCTAGCGGACGTCTGATGGTATACGCTCGGGCCCTTCCTGAGCCGTTCT
GGCGTGTTTTTTTTTCCCCAGACACAGGTTTGGCTTGTCGCTTTTGGTGT
TGGTGGTCAAATCGTTCCCCCGGAGCTTGCTGGGGTAGCTAACTCGCCTT
TCGTGTTGAGAAGGAAATGGGGCGTAGTCTTGTGCTCGTAACGGAAGCGC
GTCATCCTTGGCAAGTCCATGCTCGCCTACATTAGTTTAAGGTGCCCGCA
TTTTCCTCTCGTCTGTCCGTGTATCAGCGCTCATTTTGCGAGCGGTTGAG
TTTGGGGAAGTGCTCGAACAAGAGACAAGCATGCACAAAGGTGTCACTAC
AACAGGCCGCTGAGTTAAAGGAGATATGGGGCGCAGGAAACATTGGGCAT
TGCGAGGTTACACCACTCGCCGCTAAGTATGTAAATTCATCAAATGTCTC
GTGTGCATTCCTGTGTACATCAGACGCCAGTTTCGTACAATTGATCTTGT
ACGCACTGGGTACTTGTTAATTACGAGTGTGATGTTTTGCCCCACACGAA
TTGCGCAGGCCCTCGATGTGAGTACACTTGTGAGGACTCCGTTTCCGGAA
GAATAGTCCGCGTCGGTTTTTGTATCGTCGTGCCCTTGTTGTCGGTTACC
TTTGCTTGCTTGTTTGGGCGAGAAAAGACTGCTGTTATTAACATATCAGC
GTTAGCCCGTCGCCACATGGGTACGAGTAATTTATTGCCGTCTGAAATGT
TCCAGGGGGAAAAGCCGACGAGGAGACGAGTGCCGTTGGAGAGGGGTTGC
GGGAGTTCTTTGTTGTTGCTTTGTACCATTAGGAAGCGGTGGCTGGAACT
ACGGTGTAGGCTGTACGCACTGGCAACGCTTCACGTGTGTTTGAACTCTC
GGTGCCTGGCGCGTGACAGGGCAAATCGATTTAACAACGATACACGTTCT
TTGTATTAACGAAGTGTTCGCTCCGGTTTCTGCCTGCCACGCGGCACAAG
AAACTCGTGGTGTTGCGATAAATGCACGGGATGCGCGCACGGGGATGCTC
GGCGGGGACAACGAAAGGTCGTGCACCATCATCAGCCAGGGGAGACGGCA
CAACGTCTCCCATGCCACCTTCACACTTTTGCAAGGCGGATATATCTTCA
ACGTTGGCATGCACGGTCCAGTAGCTCGGCACAAGCGACCCAGGCCTACG
ACCGAACGCTGACCACGCTTGGGGTATGGGTTGTAGGGTTTAGTGGCGTC
TAGAGCCTCGCGCCAAGGTGTAGCGTGAGCGCTCGTAGCTTTGCTACACC
GTAGCTTTGGTGTCGTGTCTGCCTCTAGCCGCAACCCAAAGGCTGCCCTG
GAACTGACCGCGAGCAACGTTGGTTGGCGCACAAGCTGGATCAGGGAAAT
GAACCTCAATTCGTTCAACCACATCTGCCAGGCGAAGTACGTCCACGAAC
TTAACATGAGGTATCGTAGTGGCCTCCGTAAGCAACGGAACAGACCCCCG
TGGCCGGAATGTAA
back to top

protein sequence of EsuBft1205_4a-0001

>EsuBft1205_4 ID=EsuBft1205_4|Name=EsuBft1205_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=468bp
MNSTTTSTASLTSSDPAYALQPATLGDVQSLGDEMDIFWLMFGAILVFFM
QTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAMGDTKGR
FIGSNAFALKGDHFEADDGTLTNGYNYAMWLFQWAFAATAATIVSGAVAE
RVSFNAYIIYSIVLTSFIYPVVVHWGWGGGWASAWMEEDLLFGCGVIDFA
GSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTSNSLPQQSAVLQSLGTLI
LWFGWYGFNGVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLHVG
YWDAGAANNGLLAGLVGVTAACSTCEPEGAMVIGIISGFVYTYASKMLVK
FKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYDRADKCAGVFYG
GDGNAVAANVVFILAVIAWVVVTCLALFVGINAVVGMRVDKEMEQIGMDD
SKHGGQTYPEMLKGATSA
back to top

mRNA from alignment at Scaffold_210:118596..126829-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1205_4a-0001 ID=EsuBft1205_4a-0001|Name=EsuBft1205_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=8234bp|location=Sequence derived from alignment at Scaffold_210:118596..126829- (Ectocarpus subulatus male Bft15b)
TTTCTGTTCCTCTCCACACCTCTCTCCCCCCTCCTGTTCGTGCCCAAGCT CAGCACAACCCACACTCGCTTTTTCTCCCCGTCTCTCCGAAGACGAAGGC GCGAACTATGAATTCCACGACCACCTCGACCGCCTCGCTGACCTCCTCGG ACCCCGCGTATGCCCTGCAGCCTGCAACGCTCGGTGATGTCCAATCGCTT GGGGATGAGATGGATATATTCTGGTTGATGTTTGGCGCCATCCTCGTCTT CTGTGAGTGTTATGTGTTCTTGTCTGTTGTTCTCGCCCTCCGAGCTTTGT TGCTTTTCTTCAAATCGACATGTCCATGTCATCTGAGTCTGCAGGCCTAG CGCTCGCCACGTGGGTTCCTACTGATGACCCTCGTGCTGGCCTGATGTCG CCATTTTCCGCGGTGTCGTGAAGACGATGGCCGCCCCCAGCGTCTTGTAT CCTAGGTCCTGAGGGAACAAATTTTGACAGGCCGGAGAGTTGAGGGGACA GGAAAAAAGGCTCGCTCTCTCCGATGGTGCCCGTCCTGTTGCCGAGGTGG TACTCCCAGCCTGCAGAGTAATGTGACACGAGGAGGGCCTGGCATTGAAG AGATGGGTGATGTGTTTGGGGTACGTCGAAAGTGTTTGTACAGCAGCAGT TGAGGCTAGTCCGGTGGATGTCCTGCCGCGCGCTGCCGCCGTTGCTCCCC TTCCTTTTCTTCTCTCTACGCTGTTCTTTGGGCACATGCGGCACATGAAT CACTTTCGGTTAAAAAAACTTAATACACCGTGTAACAGCACCCCGCCGCG GTCGGGCAAGAGTACAAGGAGTTGCTCAGCTCACCCCTGTCGTCCCTGTT TTACTTTATTTTACGAGAAGAACGGCAGCTCCTGTGACGAGAGCTCTTGT GTGGAACCCATTTTTTTTCTCCCAAGCTCGCGACGCTGCAAAGCGCGAAC CCCTCCGTCTCCTCTCAATATCTCAAGAGCTTTTTTTGTTGACCAATGAA CACTCTTCAAGCGCTCTTTCCCCGCTTCCCATCGTGAGGCTTGAGGTCCG TCTGTTCACGGCGGTATGCCGTCAGCTTGCGTAACCCACATCCGTGACGC ATCGTGCGAACGCACAAAACTGCTGCGACCTGTGGGGCGCAAAATTCTTG TTTCGTACGCGCGCGCAGTGTTACATCCAGGCGCAGTTCCGTGGTTCAAA GCCGAGAGCTGCTGGCTCGTGACATCATATTTTCCACCTTTTCGATTCAG AGCCAAACATCATATTGTCGGAGTTTAGCCTACTATAGTTTGCCACGCGT TCCCTCTTCAGACGCGTACCATGCATGCTGCTGACGGCTTTCTGCTGCCG CCCACCCCATGCCCGATGCCGCCGCCATCGCCTGCCGTCAACAACATCCA CCGCGACTGCTGCTGCTACGTCAGTCATGCAGACTGGATTCGCCATGCTG GAGGTGAGAGCGGAGAGAAGAAGCAGCGCATGCGTATGCTGGCTACGTTG TTGTTGCGCCTAATTAGTGCCACGTTATAAGATCGCAGCACCATCCTTGA ATCCGAAAGGTGAAGAGCAGTGACACTCCTCGTATGCAGATATGGGTTCG ATTTTAGAGGCGCACGGGTTGTGGTTCGAGCGACACAGGTTTCTTTTGTC CCCCACGTATCCCAGTTTTTACAGCTACGTCTCTTGCTGTTCCCATTCCG ATTAGACCGGCCGGGGGCGCCGAAAATTCGAGGCCTGGTCTGTACACTTT CAGGCATCCACGTGCAAACGTTCAAAGTAAAGAATATCTCATCCTTGCCT ATCCTGCATTAGACACGATGCGTTTGTTCATCATAAATTTATCCCTGCTC CTCTTGAATTCTCAAAGAGTATGCCCTCGTCGTGATCCGTGCTTTTTTTT TCGTTCACTTCAAGTCAGCGCCCACCATGCACCTCGATCAACCCTTCGGG GTCTAAAGGCGTCCTGACTGATCACTGGTTTATCACTTGCAAATGATGTT GTGGCATGCCATGGAGTTGTTACCCTGTTCTTCTCCACGTCAGGTGGAAT AAGTCAACAGGTACGTGTGTCTTCATTATTCGCATCGACCGCGCCACCAG GTGACCAATGCCAAGACGTCACAATAGTGCCTGCGGGTAAAATCCCTGGG ACGGCAAAATTTCGAGAAATGCACAATTTCATGCAAATGCCACCATGAAT CTCTCCAACATCCTTTGACAGAGGCACACATCAATAGCTCCACATACATG CCCTCGCCCGAATCTAGGTAGCCACTCGAGAAAAGACAGGATGACAGCGA CAAGAGGCACTTCAACCCCAAATAGGCCAGGATGTGATAGTGGGGTGCAG ATAGCTGTTCCGTCTTTAGAAGTACGCGCATTTCTTTATTAGGAGAAACA AATATACACACAGAAAGACTACCCGTTCGAGGTATAACTACACTCGAAGG GGATGTGTTGAAGTCTTTACAGTGAGTAGAGGAAAACCAGCTGGGTACTT GACTTATTTCGAGTTTGTTTAAGCCTATACACTGATGATTTATATCAGTG ATACCAGTTGGTGCTTAGCACAAAAACATCTGCGTAGGTACATTTACATG TGGCCTGCACAGGGAACACGGCGCAATATGTCATGTTGACAGTAGTTGCT GGTTTAATTTAGAAAAATACATATATTAGGAAAAACAAATATGCACACAG AAAGACTACCCGTTAAACACATTAAAGCTCCCTGTTCGAGCGAAATTCAT AGTCGTTCGAGGGGAGCTTTTTACAGCAGTATTTAGGAAAAACAAGTATA CGTGCAGAAAGGCTACAGCAGTATGCAATAACCGACATACGTTAGTTTAT CTTTTTACTACAAAGTACTGTTTATTACAGCAGTAGTTGTTGTACCTATT TGAAAAAACAAATATACACTAGTCTAATTATTTATTTTATTTGTTTATTT GTTTATTTGTTTATTTGTTCTTTCTGCTGTACGTCTGTCCCTCTCCCGCG TTTTCTCCTCGCTGATTTGTTTTTGCTGAAGTATATAATGAAACAGCTAG ACCCAAGTCTGAACGGGTTAACGGCACTCCGTGGTCACACAAAGGGTTCC TCCGCAACGTCCCCACCCCTGCTAGAGTACCTTCCTTGCCTTCGATTTTA ATTTCGAAAAAGAGTGAGCAACATTTCATTCCTCTTTGTACGCTCGAACT AATATGTTGCGCTTTCCATCCAGGCCACGAACGCAAGCGAAAGAAAACTC ACTTTCAAAAATGATTCAACCGGAATCCGAACACGTGACCCCAGCCAGTA GAAGGTTGACGAGGGTACACATGATTACCGACTGAACATACCGACCGGTA GGTTTGAAGGAGAAATTCCTCCACGCGATGAACAACCCAAACTTCAGCAC ATGCCGTTCGACTGCTGTGATATCTGTGATACTCGCGCGCATAGTACAAA ATTTCTATGTGCGTTTGCTATGTTATTTTTCGACACAAACAGGACGAGTT TTTTTGGACTGCGGTCGACTAGAGCCCACTACATGCCGATGTGACGAAAA CACTTCCGCTAGCAACTTAATCTGGCTCTGTCAAATTCAGCAATTTAGCA TGAAGTACCTCTGCGGTTTGCCTCACAGTTGTCTGCTACCGTTCATCGGT GACTTGAAATACCACACCCGGTACGCCGATTTTGAAATATCGATTCCCCC TCGATAAACAGGATGTAGAAATGAAAGAAACATCGTCGCGAAGCCCCTGA GGCCGTTCCAACACCCCCTTCGATTCGGCGCTGTCACACACTACTCTTGC TGTTGGGTACTCAAGCTCTGGAAATCAGATCAGGAGAAGTGGGTGGGTAT CTCTTGCCACGCGCCGCGGTTTTCCCGAAAGGCGACTTGTGGTCCTCCTT GTCCTCTTATTGATCAGCTTCTTTTCTGGTAACCCCAAACCTGCCCGCAC CGCCACTAAACTAGCCTCCGACACCTCCATATTAAATGAGAGTAAAGAAA AAAATTGGTGGGTTGGCGTTACAGTAGCCGTTCACGCCAAGAGCCTCCTC CTCGCCCGTAAATCATTTGTGTATCCCCTTGTTTCGCATGGATCATCGAC CGACGAAGAAGTTGCTCCCCCCGTCGCCATTCTTTTGCCTGTTTCGTATT CTCTTCCGTTGAACCGAACGCAAACCTATTAGGTCGGTTCCGTGTCCATC AAGAATACCAAAAACATCTTGATCAAGAACATTGGCGACGCCTCCCTGGG CGCCATCTGCTGGTGGCTGTTAGGCTACGGTGTCGCCATGGGAGATACTA AGGGTGCGTATGTACAGCGATACTAAGGGTGCGTATGTACAGCGTGCGAC GAGACATTTATCGCGCACGATTACAATAATGGTATTATTTGCTTTTATCG AGTGACACAAGCCAGGAGGTGTAGGCGCGTGTCGCTTTTTCCATGTATGT CAAGTCCATGTCAGTCTGCCGGGAGTACTTGTTGGTACTGTCGTATGCCC CTGTGTCGTCTGTGAGCATAACAAGGCAACAGGGAATCGTGAAGGGGTGC CGGCGGTTTCCTACAGCGAGCAAGCGCGTCGTCCACAACACCAGGATGCC ACCTGCGGTGACAGGTGGACCTTGCCGATAGTTCCCCTCTTTTTCCTCCA CGCTGCCTGAGTGTTAATTTTGCCTTCCCCGCGCCCGTCCTCCCTCCCCT GGCAACCGCAGGTCGTTTCATCGGAAGCAACGCCTTTGCCCTCAAGGGCG ACCACTTCGAGGCGGACGACGGCACCCTCACCAACGGCTACAATTACGCC ATGTGGCTGTTCCAGTGGGCCTTCGCTGCAACCGCCGCCACCATCGTGTC GGGGGCTGTGGCCGAGCGCGTGTCCTTCAACGCGTACATCATCTACTCTA TTGTCCTGACGTCGTTCATCTACCCCGTTGTCGTGCACTGGGGCTGGGGC GGCGGGTGGGCCTCCGCCTGGATGGAAGAGGACCTCCTGTTCGGCTGCGG TGTCATTGACTTCGCCGGTTCTGGCGTCGTCCACATGACCGGCGGCCTCG CCGCACTCTGCGCGGCCATCGTCGTGGGACCCCGCACCGGCCGCTTCAAC GAGGATGGCACCTCCAACTCCCTCCCCCAGCAGTCCGCGGTGCTCCAGTC GCTCGGCACGCTCATCCTCTGGTTCGGATGGTATGGGTTTAACGGTGTGT CCACACTCGCCATCAACGGCCTTGCCGGAGTTGCCGCGAAGACTATGGTG ACCACCACCATCTCGGCTGCCTTCGGTGCCGTCACGACTGTCCTCCTGGG CAAGCTTCACGTCGGGTATTGGGACGCAGGGGCCGCCAACAACGGTCTCC TTGCAGGTCTCGTGGGCGTCACCGCGGCCTGCTCTACCTGCGAGCCCGAG GGCGCTATGGTGATAGGCATCATTTCCGGCTTCGTGTACACCTACGCCTC CAAGATGCTTGTGAAGTTCAAGATCGACGACGTCGTGGACGCCATCCCTG TCCACTGCTTCTGCGGAGCGTGGGGTGTGTTCGCCGCGTCGCTCTTCGCG ACAAAAGACAACTGTGAGTGTGCCCTTTGCCCAGCCACCTCAGCCCCCCT CCTCTTGTCCGGCAAGTTTCATCATTCCGCCAGTTGGTTCATGAGGCCTG GTCACGAAGCGATTCATGCTTGCAAGCATACTTTTGGCACAAACAACGCT AGGGGGATGGTATGTAGCCATACAGGCGCTATGCGTACGTAGTTGTTGCC AAATCATTGTGAGGTTGGTGGCCGCATATGTTCGTTTGTGAGGTAGCTTC CTCTTGGCTAGCGTTGTACGCCATCCATCTGATTCTTTCCCCCCCCCAAT AACCTTGGCTCCACATCATATCAGATAGCGCGGCTTACTACGACCGCGCG GACAAGTGCGCGGGTGTCTTCTACGGCGGCGATGGAAATGCCGTCGCTGC CAACGTGGTGTTCATTCTGGCCGTCATCGCATGGGTCGTGGTTACGTGCT TGGCCCTGTTCGTAGGGATCAACGCTGTCGTCGGTATGCGTGTGGACAAG GAGATGGAGGTCAGTTCGTTCACCCGCGCCATTTTTTTTTTTCCGTCGCT GTCTGCCCTTCTCGTTCGTCTAGCTCCCGTGCCGTGGAAAATGGTGAGGT ACTGTCGCTGTTCCCCCTCGTTCTTTTCTCTCGACGATCGGTCCCTGCTG CGCTTGAAGTGGGGCGTGACAGCTCGCTTGCACGGGTACAGTGTGCGCGG TGTCGATCGATCCGTTGGTCGACGCTCCATAAAATAACGATCATGTCAGC AGACTAGCTAGCGCTGACCAGTTGAATGGTTCGATGTCAGCTTCTACAGC TCGCATGGGGTAGTGCCAATGTCCATATCATACACGTCGCCTGACCCTCG CGTCTTGTCCTCGTCTTGGTCGTTTGTTTCTCCCGTCGTATTTTGTTCGT CGGCATCAGCAAATTGGCATGGACGACTCCAAGCACGGAGGCCAGACCTA CCCAGAGATGCTGAAGGGGGCCACCTCGGCGTAAATTTTCTTTTTGGTTT CGCCAATGCCACGCGGCGGCCACCTGGTGATCGTCCCACGACCCTGGGTC CCGATCTGTTGCAACTCAGATGCAAGAGGCCGTCAGTGACGAGTCAGCCG GCTTCTCGCGCGCACTTGAATGCGTGGGCGAACGCTGCTGGGCTTGGTTG TAGAAGGAATAATGAAATGTAGCTAGCGGACGTCTGATGGTATACGCTCG GGCCCTTCCTGAGCCGTTCTGGCGTGTTTTTTTTTCCCCAGACACAGGTT TGGCTTGTCGCTTTTGGTGTTGGTGGTCAAATCGTTCCCCCGGAGCTTGC TGGGGTAGCTAACTCGCCTTTCGTGTTGAGAAGGAAATGGGGCGTAGTCT TGTGCTCGTAACGGAAGCGCGTCATCCTTGGCAAGTCCATGCTCGCCTAC ATTAGTTTAAGGTGCCCGCATTTTCCTCTCGTCTGTCCGTGTATCAGCGC TCATTTTGCGAGCGGTTGAGTTTGGGGAAGTGCTCGAACAAGAGACAAGC ATGCACAAAGGTGTCACTACAACAGGCCGCTGAGTTAAAGGAGATATGGG GCGCAGGAAACATTGGGCATTGCGAGGTTACACCACTCGCCGCTAAGTAT GTAAATTCATCAAATGTCTCGTGTGCATTCCTGTGTACATCAGACGCCAG TTTCGTACAATTGATCTTGTACGCACTGGGTACTTGTTAATTACGAGTGT GATGTTTTGCCCCACACGAATTGCGCAGGCCCTCGATGTGAGTACACTTG TGAGGACTCCGTTTCCGGAAGAATAGTCCGCGTCGGTTTTTGTATCGTCG TGCCCTTGTTGTCGGTTACCTTTGCTTGCTTGTTTGGGCGAGAAAAGACT GCTGTTATTAACATATCAGCGTTAGCCCGTCGCCACATGGGTACGAGTAA TTTATTGCCGTCTGAAATGTTCCAGGGGGAAAAGCCGACGAGGAGACGAG TGCCGTTGGAGAGGGGTTGCGGGAGTTCTTTGTTGTTGCTTTGTACCATT AGGAAGCGGTGGCTGGAACTACGGTGTAGGCTGTACGCACTGGCAACGCT TCACGTGTGTTTGAACTCTCGGTGCCTGGCGCGTGACAGGGCAAATCGAT TTAACAACGATACACGTTCTTTGTATTAACGAAGTGTTCGCTCCGGTTTC TGCCTGCCACGCGGCACAAGAAACTCGTGGTGTTGCGATAAATGCACGGG ATGCGCGCACGGGGATGCTCGGCGGGGACAACGAAAGGTCGTGCACCATC ATCAGCCAGGGGAGACGGCACAACGTCTCCCATGCCACCTTCACACTTTT GCAAGGCGGATATATCTTCAACGTTGGCATGCACGGTCCAGTAGCTCGGC ACAAGCGACCCAGGCCTACGACCGAACGCTGACCACGCTTGGGGTATGGG TTGTAGGGTTTAGTGGCGTCTAGAGCCTCGCGCCAAGGTGTAGCGTGAGC GCTCGTAGCTTTGCTACACCGTAGCTTTGGTGTCGTGTCTGCCTCTAGCC GCAACCCAAAGGCTGCCCTGGAACTGACCGCGAGCAACGTTGGTTGGCGC ACAAGCTGGATCAGGGAAATGAACCTCAATTCGTTCAACCACATCTGCCA GGCGAAGTACGTCCACGAACTTAACATGAGGTATCGTAGTGGCCTCCGTA AGCAACGGAACAGACCCCCGTGGCCGGAATGTAA
back to top

Coding sequence (CDS) from alignment at Scaffold_210:118596..126829-

>EsuBft1205_4a-0001 ID=EsuBft1205_4a-0001|Name=EsuBft1205_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1407bp|location=Sequence derived from alignment at Scaffold_210:118596..126829- (Ectocarpus subulatus male Bft15b)
ATGAATTCCACGACCACCTCGACCGCCTCGCTGACCTCCTCGGACCCCGC
GTATGCCCTGCAGCCTGCAACGCTCGGTGATGTCCAATCGCTTGGGGATG
AGATGGATATATTCTGGTTGATGTTTGGCGCCATCCTCGTCTTCTTCATG
CAGACTGGATTCGCCATGCTGGAGGTCGGTTCCGTGTCCATCAAGAATAC
CAAAAACATCTTGATCAAGAACATTGGCGACGCCTCCCTGGGCGCCATCT
GCTGGTGGCTGTTAGGCTACGGTGTCGCCATGGGAGATACTAAGGGTCGT
TTCATCGGAAGCAACGCCTTTGCCCTCAAGGGCGACCACTTCGAGGCGGA
CGACGGCACCCTCACCAACGGCTACAATTACGCCATGTGGCTGTTCCAGT
GGGCCTTCGCTGCAACCGCCGCCACCATCGTGTCGGGGGCTGTGGCCGAG
CGCGTGTCCTTCAACGCGTACATCATCTACTCTATTGTCCTGACGTCGTT
CATCTACCCCGTTGTCGTGCACTGGGGCTGGGGCGGCGGGTGGGCCTCCG
CCTGGATGGAAGAGGACCTCCTGTTCGGCTGCGGTGTCATTGACTTCGCC
GGTTCTGGCGTCGTCCACATGACCGGCGGCCTCGCCGCACTCTGCGCGGC
CATCGTCGTGGGACCCCGCACCGGCCGCTTCAACGAGGATGGCACCTCCA
ACTCCCTCCCCCAGCAGTCCGCGGTGCTCCAGTCGCTCGGCACGCTCATC
CTCTGGTTCGGATGGTATGGGTTTAACGGTGTGTCCACACTCGCCATCAA
CGGCCTTGCCGGAGTTGCCGCGAAGACTATGGTGACCACCACCATCTCGG
CTGCCTTCGGTGCCGTCACGACTGTCCTCCTGGGCAAGCTTCACGTCGGG
TATTGGGACGCAGGGGCCGCCAACAACGGTCTCCTTGCAGGTCTCGTGGG
CGTCACCGCGGCCTGCTCTACCTGCGAGCCCGAGGGCGCTATGGTGATAG
GCATCATTTCCGGCTTCGTGTACACCTACGCCTCCAAGATGCTTGTGAAG
TTCAAGATCGACGACGTCGTGGACGCCATCCCTGTCCACTGCTTCTGCGG
AGCGTGGGGTGTGTTCGCCGCGTCGCTCTTCGCGACAAAAGACAACTATA
GCGCGGCTTACTACGACCGCGCGGACAAGTGCGCGGGTGTCTTCTACGGC
GGCGATGGAAATGCCGTCGCTGCCAACGTGGTGTTCATTCTGGCCGTCAT
CGCATGGGTCGTGGTTACGTGCTTGGCCCTGTTCGTAGGGATCAACGCTG
TCGTCGGTATGCGTGTGGACAAGGAGATGGAGCAAATTGGCATGGACGAC
TCCAAGCACGGAGGCCAGACCTACCCAGAGATGCTGAAGGGGGCCACCTC
GGCGTAA
back to top