Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 120017.I2FSM7 |
| ProteomeId | EsuBft119_18 |
| Protein domains | Coil |
| Protein domains | IPR013103 |
| Protein domains | PTHR11439 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | copia protein os:drosophila melanogaster gn:gip pe:1 sv:3 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 4751|Fungi |
| Length | 1392 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.51e-13 |
| EggNOG OGs | COG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3UY7N@5204|Basidiomycota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Encoded by |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003824 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_18a-0001 ID=EsuBft119_18a-0001|Name=EsuBft119_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1392bp|location=Sequence derived from alignment at Scaffold_420:498430..501106+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGGCTGCTGGCTCAAGCAAACGAAGACGTCCTCCTCTCCATGCTGGA
TGCTCGGCGAGTCATGAACGGCAAGACAATGCTCCGGTCAGGATTGAAGG
GGGGCGGCGAGAAGGGGGACAGAGGCGAGCAGCTCGCGAGGAGTGAGGGC
GTGGTAGGGAGCACGGGAAAGTTGCCGGAGGTGGACATCGGCGAGGAGGG
ACGCATGGGGAATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGC
TCGGACTTGTGGCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTG
CGCGAGACGGAGCCGCCTCTCTTGCGACCCGACATGCCGCGCTGCCACGC
AAAGGACCGCCGAGTACCCCAGACTTTCAAGAGGCAAAGCAGAGCGAACA
AACCGAACAGTTCATGGATGCGGCCAAGCCGAATAGACAACTGCATCAAG
TCGAAGTTGATTTTTGATTGGAAGGTAGATGCGTTCGGCTTTCCTACGAA
GGCCAAGGCTAGACTTGTTGCGAGAGGAGACATGCAGAAGGAGTTCATTG
ACTTTGGTGACTTGTATGCACCTACTGTAGTTTCATCTAGTGTTCGTATG
TTGGCAGCTTTGGCGTGTGAGCTTGACTTGGAGTTGTGTCACTTCGATGT
CGACCAGGCTTTTGTGAGGGCCCCTCTCAAGGAAGACATTTGCATGCGAC
TGCCGGAAGGATGTGTGGGGACGAAGGAGAAGTGTGATCAATTCGGCAAG
GACCTGGAAGGGGCCTCCAGCCGCCCTCCGCCCACGGCGCTCAGGCGGCC
AACGGGAGAGACCGCCGCCGAGCTGACGGCTACGGTGATGTCGGCCGCTG
CTGAGACCGCGCCGCTGGCGAGGTGCGCACGAGGGCAGAGAGGCTGGTAC
ACGAGCGAAGCGCAGCACGAGATCTCTGAAGCGTCGAAGGAGATCAAGGC
GACCCAGCAGCAGTTGCGTGGGGCCTCAAAGAACAGCGCCTGCGAGGCAA
CCCTGAAGGCGATGCTCAAAGCGGCGCGGAAGAAGCGCAGCATCGCGAGG
TGGAGAGCACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGGAAATTGCCAACAGAAAGGCCGTCGGCCGGACGACCTACCGG
CTGAGCTGATCGAGCTTTTCCTGCACGGAGATCAAGGTTTCCTCCGCGAA
TTCCACGCCATTGTCGTGGACGTGTGGCAGACTGGGGNNNNN back to topprotein sequence of EsuBft119_18a-0001 >EsuBft119_18 ID=EsuBft119_18|Name=EsuBft119_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=464bp
MGLLAQANEDVLLSMLDARRVMNGKTMLRSGLKGGGEKGDRGEQLARSEG
VVGSTGKLPEVDIGEEGRMGNGWSIGPSERGVPLGLVARLATRDDLDSAV
RETEPPLLRPDMPRCHAKDRRVPQTFKRQSRANKPNSSWMRPSRIDNCIK
SKLIFDWKVDAFGFPTKAKARLVARGDMQKEFIDFGDLYAPTVVSSSVRM
LAALACELDLELCHFDVDQAFVRAPLKEDICMRLPEGCVGTKEKCDQFGK
DLEGASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGWY
TSEAQHEISEASKEIKATQQQLRGASKNSACEATLKAMLKAARKKRSIAR
WRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXGNCQQKGRRPDDLPAELIELFLHGDQGFLRE
FHAIVVDVWQTGXX back to topmRNA from alignment at Scaffold_420:498430..501106+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_18a-0001 ID=EsuBft119_18a-0001|Name=EsuBft119_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2677bp|location=Sequence derived from alignment at Scaffold_420:498430..501106+ (Ectocarpus subulatus male Bft15b)
ATGGGGCTGCTGGCTCAAGCAAACGAAGACGTCCTCCTCTCCATGCTGGA
TGCTCGGCGAGTCATGAACGGCAAGACAATGCTCCGGTCAGGATTGAAGG
GGGGCGGCGAGAAGGGGGACAGAGGCGAGCAGCTCGCGAGGAGTGAGGGC
GTGGTAGGGAGCACGGGAAAGTTGCCGGAGGTGGACATCGGCGAGGAGGG
ACGCATGGGGAATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGC
TCGGACTTGTGGCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTG
CGCGAGACGGAGCCGCCTCTCTTGCGACCCGACATGCCGCGCTGCCACGC
AAAGGACCGCCGAGTACCCCAGACTTTCAAGAGGCAAAGCAGAGCGAACA
AACCGAACAGTTCATGGATGCGGCCAAGCGTGAGGTGTTTGGATTGCTAG
AAGCAGACGCGTTTAAGATTGTTGGACCGTAGCAGCGAATAGACAACTGC
ATCAAGTCGAAGTTGATTTTTGATTGGAAGGTAGATGCGTTCGGCTTTCC
TACGAAGGCCAAGGCTAGACTTGTTGCGAGAGGAGACATGCAGAAGGAGT
TCATTGACTTTGGTGACTTGTATGCACCTACTGTAGTTTCATCTAGTGTT
CGTATGTTGGCAGCTTTGGCGTGTGAGCTTGACTTGGAGTTGTGTCACTT
CGATGTCGACCAGGCTTTTGTGAGGGCCCCTCTCAAGGAAGACATTTGCA
TGCGACTGCCGGAAGGATGTGGTGCGTTGTCAGGGAAGTTAGTGCAGTTG
AACAAGAGTCTTTATGGCTTGAGGCAGGCATCTAGAGAGTGGTACGCCTT
ACTAAAGAAATGACTTTTGGCTTTGGGGTTCGAGCAGTGCATGACTGATT
CGTGTGTTTTTCGTCTAGTCGAAGAGGGGGGAGTAGTGTTGCTTTGCGTA
GCACATGTAGACGAGTTTTTTGCAGTGGGGACGAAGGAGAAGTGTGATCA
ATTCGGCAAGGACCTGGAAGGGTACGTGCCAGTGAAGTCTCTAGGGGAGT
TGAAGTGGTACTCCGGTTGCTATTACGAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGGGAGAGAGATATGGTGTCGAGTGGGGGGGGGGCATTCCTTT
GCCCACCACCTGGAGACTTTGGGACTTTGACTTGGACGAGCCGAGCGTAG
AGTACGCTGTTCGCGCGCTGGTCGGTTCGCTGTTGTGGATTGCCTCGTGG
ACTAGGCCAGATATCGCGAATTCGGTGAGAGCAGTGGCGAGGTACTGTAG
TGCACCGAAATTGATCCACTGGAAGGCTGCACTTGGCATTTGAGGATATG
CAGTATGGACTAGTTATTTGGGGATTCCTTTTCAGAGGGGGACGGTTTCG
GGATTTTCTTTGATTGCGTTTGTCGAAGCGGATTACGCTTCACGTGCGGC
AGACCGTAGTAGGTCGGTTTCGGGAGGGGTAGTTGCGGCCGTGTATTCCC
CTGTATGAGGATAACGAAGGAGCTATCCAGATCGCAATACGCCCGATCTC
GACTTCCAACTCGAAGCACATCGACGTGCGGCATCACTTCCTCATGCAGC
TCGTAAATGAGAAGGAGGTAGAGACCATCCACGTAGCGTCGAAGTATCAG
CATGCCGACTTCCTCGCGAAGGCGCTACCTGAGAGAGAGTTTGTTTCCCA
CCGGGACTACGTGATGAACTTTAAGTGATTAGTCCGGGAGATCCTTTTTG
TTTTTGAGTCTTGTGTCTTTTGTTTTGTTTTCGATTTTTGGTTTTTGTGT
TGATTTGTTTGATTCTCTGAGAAATAAGATTGACCGGTGGAAATTGTCGC
AATTCTGGTTAAATGGTTGGCAATGATTCAAACCGATAGGAATTCTAACG
AATGTTTCTGGAAGGACAAACACCTACGGGACGCCTTCCAAAACAGGGCC
TCCAGCCGCCCTCCGCCCACGGCGCTCAGGCGGCCAACGGGAGAGACCGC
CGCCGAGCTGACGGCTACGGTGATGTCGGCCGCTGCTGAGACCGCGCCGC
TGGCGAGGTGCGCACGAGGGCAGAGAGGCTGGTACACGAGCGAAGCGCAG
CACGAGATCTCTGAAGCGTCGAAGGAGATCAAGGCGACCCAGCAGCAGTT
GCGTGGGGCCTCAAAGAACAGCGCCTGCGAGGCAACCCTGAAGGCGATGC
TCAAAGCGGCGCGGAAGAAGCGCAGCATCGCGAGGTGGAGAGCACTGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAATTG
CCAACAGAAAGGCCGTCGGCCGGACGACCTACCGGCTGAGCTGATCGAGC
TTTTCCTGCACGGAGATCAAGGTTTCCTCCGCGAATTCCACGCCATTGTC
GTGGACGTGTGGCAGACTGGGGNNNNN back to topCoding sequence (CDS) from alignment at Scaffold_420:498430..501106+ >EsuBft119_18a-0001 ID=EsuBft119_18a-0001|Name=EsuBft119_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1392bp|location=Sequence derived from alignment at Scaffold_420:498430..501106+ (Ectocarpus subulatus male Bft15b)
ATGGGGCTGCTGGCTCAAGCAAACGAAGACGTCCTCCTCTCCATGCTGGA
TGCTCGGCGAGTCATGAACGGCAAGACAATGCTCCGGTCAGGATTGAAGG
GGGGCGGCGAGAAGGGGGACAGAGGCGAGCAGCTCGCGAGGAGTGAGGGC
GTGGTAGGGAGCACGGGAAAGTTGCCGGAGGTGGACATCGGCGAGGAGGG
ACGCATGGGGAATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGC
TCGGACTTGTGGCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTG
CGCGAGACGGAGCCGCCTCTCTTGCGACCCGACATGCCGCGCTGCCACGC
AAAGGACCGCCGAGTACCCCAGACTTTCAAGAGGCAAAGCAGAGCGAACA
AACCGAACAGTTCATGGATGCGGCCAAGCCGAATAGACAACTGCATCAAG
TCGAAGTTGATTTTTGATTGGAAGGTAGATGCGTTCGGCTTTCCTACGAA
GGCCAAGGCTAGACTTGTTGCGAGAGGAGACATGCAGAAGGAGTTCATTG
ACTTTGGTGACTTGTATGCACCTACTGTAGTTTCATCTAGTGTTCGTATG
TTGGCAGCTTTGGCGTGTGAGCTTGACTTGGAGTTGTGTCACTTCGATGT
CGACCAGGCTTTTGTGAGGGCCCCTCTCAAGGAAGACATTTGCATGCGAC
TGCCGGAAGGATGTGTGGGGACGAAGGAGAAGTGTGATCAATTCGGCAAG
GACCTGGAAGGGGCCTCCAGCCGCCCTCCGCCCACGGCGCTCAGGCGGCC
AACGGGAGAGACCGCCGCCGAGCTGACGGCTACGGTGATGTCGGCCGCTG
CTGAGACCGCGCCGCTGGCGAGGTGCGCACGAGGGCAGAGAGGCTGGTAC
ACGAGCGAAGCGCAGCACGAGATCTCTGAAGCGTCGAAGGAGATCAAGGC
GACCCAGCAGCAGTTGCGTGGGGCCTCAAAGAACAGCGCCTGCGAGGCAA
CCCTGAAGGCGATGCTCAAAGCGGCGCGGAAGAAGCGCAGCATCGCGAGG
TGGAGAGCACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGGAAATTGCCAACAGAAAGGCCGTCGGCCGGACGACCTACCGG
CTGAGCTGATCGAGCTTTTCCTGCACGGAGATCAAGGTTTCCTCCGCGAA
TTCCACGCCATTGTCGTGGACGTGTGGCAGACTGGGGNNNNN back to top
|