Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft119_16 |
| Protein domains | PF14223 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 221 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_16a-0001 ID=EsuBft119_16a-0001|Name=EsuBft119_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2217bp|location=Sequence derived from alignment at Scaffold_420:493452..495767+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGGACGGAGACGGACGACAGCCTCCGGGGGGATCAGGTCAGGCTGT
CCCTCCCCCCGGGGAAGGCGTCGCGGACGGAGGAGGGAGCGATTCTTTCT
TCGTCAACGATGCACGAGACCGAGGGGGTGCGCGAGCGGCAGGAGGGGAA
GATCAGCGCGACACGATGCGTGAGCTGGTTGACCTCTTCAAGCAGGCCTT
CGCGACATCAACTCATGACCAGGGGCACCGTGCCCACTCAGGCACGTCTA
GCAACCAGATCTTAGAACTGAGGCAGAGAGAAAAGATAGATGTACCAGTA
TGGAGTGATGACTATCTGAAGAACAGATCGATCGAAGTTGCATTGCGAGT
GTTCACGAGTGCTTTTGAAGCGTGGCTGGAGAGTGAGGGACTTGCTGGTG
TGATGAGGAGTTCAGAGGTCCCTGTTGGTGCAGCTGGTGTGGATTTGAAT
TGGTTGAGCAGCACGTTCGGAGAGGAGAGAGTGAAGCAATCCAGGAAGAT
TTGGACGTTTATGCTAGCTAAGATCACAGCACAACCCGTACAAGCCCAAA
TCTTGGCATCAGAATCACCTCAAGCAGGGTACCGCGTGTTTCTCGAACAA
TACAGCCAGGACAAGAGTCAGGAGCGACAAACTCTTGACGACGCATGGAA
CGTAATAGGCCAGAGGCAAGGAGAGAGTCTTATGGACTATTACGGTAGGG
CAGTTGCGCTGTGGATGAGACTTCGATCGTATGGTGATAACAGGGATGAA
AAGTCGATGTGCAGGCACATAGTACGGGGATTTCTCCCAAGGTTTGAGAA
AACTAAAGACCGTCTTCTGTTTGATTCGATGTTGTCGAGGGCTACAATGC
AGGAGATGCTGAGGTTGGAAGAGCACGAGCTGAGGTACGAGCGGAGGGCT
GCAGAGGGGAAGGAAGAGATGAGGCACGCCTTCGTCGCTGCCGGCGTGGG
CCGGGGCGGCGAGGCGGGGAAACCAGCCGCTGCAGGATCGGAGCAAGGCG
GACATCGACTCCAGCAACCACAAAGGTCGGTGCAGCCACATCAGCAGCAA
CCATCGCACTTCTGCCAGCTCCACGGCCCCAACAGCACCCACGAGACCTC
CGAATGTCACAAGTTACGCAACGAATTCCTCGCCCACTACAACGAGTTCT
GCGCGTACATGAGCGGGAGGCGGGAGGCCCAGGGGTCGGTCTTCCCTCGA
GGCGGAGCCCAAGACTCGGGGCGGATGGTTGGTGGCCCATCTCGACAGCA
GCCGTACCAAAACGAACAAGGTGCGGGCTGGAGTCGGGGCCACTCTCCAG
CGCTGCCGGGACCGCCGCGTGGGCCAGGATCCGGAGCTGGAGGACAGCTG
CAGGGGCGCAACTCTGGGGGGCGTGGGTATGGTAGATACGGTCCTTGCCC
CCCGGAGAGCCGAGGTCGTCAGATGGGCGGCCGTGGTGGCGGCGACATCA
CCTCGGGATGGGAGGCCACGTGGGCGCCCGGATCTACACCCAGCTGGACC
CCACCACCTCCTGAGGCAGACTACGGGTACGGGCTCGCGGCTCACGGAGT
GGACCATGGCGGAGGTCCCTNTGTACTGCGGCACTATTTTCCGGCTCATT
TCGCCATCGGAGGCGGAGAACCATCAGGCGGCGACATCACCTCGGGATGG
GAGGCCACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACGGTTTCCACCGATTCCCCGACGGCGGAGGGCTCTACCAGCAGCAAC
AAGTGAGCAACGTACCACACTATCCTTCTGCTGCTGGACCGGACGCCCAA
CAACCACGAGCTTACGAGGCCTTCGATACCTCGCAGCATCAGCAGCATCA
GCAGCATCAGCAGCACTACGGTGCACCCCAGGCGACCTCTTCCGCTTCCT
CTTCCTCTCCAGCTCCTGGCGACGCTCTACCTCCAGCCGGCGATTCCCCT
CTGCGTCTCTTCATGGCACGTGGCGTGTGCCCTCGAGGCAAGTCTGAGAT
TGATTATGAGAAGGATGTTGGTTTTTCGATGTCTAGCGTGTTCACGAGTG
TGGAGTCTGATGTGTCAATGCCTGGTGTTCCCCGCGTGCCTGCTGTGCAT
GAAGGTTCTGATGATGAGTTCGGTGTCTCGACGTTTGGTGTGTCTACTCA
TGATGTACCCCGCGTGCCCGCTGTACTTGAGAGTCCTGATGAAGTGGTCG
GCGTTTCGGAGTGTGAT back to topprotein sequence of EsuBft119_16a-0001 >EsuBft119_16 ID=EsuBft119_16|Name=EsuBft119_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=554bp
MPDGDGRQPPGGSGQAVPPPGEGVADGGGSDSFFVNDARDRGGARAAGGE
DQRDTMRELVDLFKQAFATSTHDQGHRAHSGTSSNQILELRQREKIDVPV
WSDDYLKNRSIEVALRVFTSAFEAWLESEGLAGVMRSSEVPVGAAGVDLN
WLSSTFGEERVKQSRKIWTFMLAKITAQPVQAQILASESPQAGYRVFLEQ
YSQDKSQERQTLDDAWNVIGQRQGESLMDYYGRAVALWMRLRSYGDNRDE
KSMCRHIVRGFLPRFEKTKDRLLFDSMLSRATMQEMLRLEEHELRYERRA
AEGKEEMRHAFVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSVQPHQQQ
PSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQGSVFPR
GGAQDSGRMVGGPSRQQPYQNEQGAGWSRGHSPALPGPPRGPGSGAGGQL
QGRNSGGRGYGRYGPCPPESRGRQMGGRGGGDITSGWEATWAPGSTPSWT
PPPPEADYGYGLAAHGVDHGGGPXVLRHYFPAHFAIGGGEPSGGDITSGW
EATX back to topmRNA from alignment at Scaffold_420:493452..495767+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_16a-0001 ID=EsuBft119_16a-0001|Name=EsuBft119_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2316bp|location=Sequence derived from alignment at Scaffold_420:493452..495767+ (Ectocarpus subulatus male Bft15b)
ATGCCGGACGGAGACGGACGACAGCCTCCGGGGGGATCAGGTCAGGCTGT
CCCTCCCCCCGGGGAAGGCGTCGCGGACGGAGGAGGGAGCGATTCTTTCT
TCGTCAACGATGCACGAGACCGAGGGGGTGCGCGAGCGGCAGGAGGGGAA
GATCAGCGCGACACGATGCGTGAGCTGGTTGACCTCTTCAAGCAGGCCTT
CGCGACATCAACTCATGACCAGGGGCACCGTGCCCACTCAGGCACGTCTA
GCAACCAGATCTTAGAACTGAGGCAGAGAGAAAAGATAGATGTACCAGTA
TGGAGTGATGACTATCTGAAGAACAGATCGATCGAAGTTGCATTGCGAGT
GTTCACGAGTGCTTTTGAAGCGTGGCTGGAGAGTGAGGGACTTGCTGGTG
TGATGAGGAGTTCAGAGGTCCCTGTTGGTGCAGCTGGTGTGGATTTGAAT
TGGTTGAGCAGCACGTTCGGAGAGGAGAGAGTGAAGCAATCCAGGAAGAT
TTGGACGTTTATGCTAGCTAAGATCACAGCACAACCCGTACAAGCCCAAA
TCTTGGCATCAGAATCACCTCAAGCAGGGTACCGCGTGTTTCTCGAACAA
TACAGCCAGGACAAGAGTCAGGAGCGACAAACTCTTGACGACGCATGGAA
CGTAATAGGCCAGAGGCAAGGAGAGAGTCTTATGGACTATTACGGTAGGG
CAGTTGCGCTGTGGATGAGACTTCGATCGTATGGTGATAACAGGGATGAA
AAGTCGATGTGCAGGCACATAGTACGGGGATTTCTCCCAAGGTTTGAGAA
AACTAAAGACCGTCTTCTGTTTGATTCGATGTTGTCGAGGGCTACAATGC
AGGAGATGCTGAGGTTGGAAGAGCACGAGCTGAGGTACGAGCGGAGGGCT
GCAGAGGGGAAGGAAGAGATGAGGCACGCCTTCGTCGCTGCCGGCGTGGG
CCGGGGCGGCGAGGCGGGGAAACCAGCCGCTGCAGGATCGGAGCAAGGCG
GACATCGACTCCAGCAACCACAAAGGTCGGTGCAGCCACATCAGCAGCAA
CCATCGCACTTCTGCCAGCTCCACGGCCCCAACAGCACCCACGAGACCTC
CGAATGTCACAAGTTACGCAACGAATTCCTCGCCCACTACAACGAGTTCT
GCGCGTACATGAGCGGGAGGCGGGAGGCCCAGGGGTCGGTCTTCCCTCGA
GGCGGAGCCCAAGACTCGGGGCGGATGGTTGGTGGCCCATCTCGACAGCA
GCCGTACCAAAACGAACAAGGTGCGGGCTGGAGTCGGGGCCACTCTCCAG
CGCTGCCGGGACCGCCGCGTGGGCCAGGATCCGGAGCTGGAGGACAGCTG
CAGGGGCGCAACTCTGGGGGGCGTGGGTATGGTAGATACGGTCCTTGCCC
CCCGGAGAGCCGAGGTCGTCAGATGGGCGGCCGTGGTGGTAATTATCCGC
CGCCCAACGTTCCTCCCGCGCAGATTGCCAATGTACTGCGGCACTATTTT
CCGGCTCATTTCGCCATCGGAGGCGGAGAACCATCAGGCGGCGACATCAC
CTCGGGATGGGAGGCCACGTGGGCGCCCGGATCTACACCCAGCTGGACCC
CACCACCTCCTGAGGCAGACTACGGGTACGGGCTCGCGGCTCACGGAGTG
GACCATGGCGGAGGTCCCTNTGTACTGCGGCACTATTTTCCGGCTCATTT
CGCCATCGGAGGCGGAGAACCATCAGGCGGCGACATCACCTCGGGATGGG
AGGCCACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NACGGTTTCCACCGATTCCCCGACGGCGGAGGGCTCTACCAGCAGCAACA
AGTGAGCAACGTACCACACTATCCTTCTGCTGCTGGACCGGACGCCCAAC
AACCACGAGCTTACGAGGCCTTCGATACCTCGCAGCATCAGCAGCATCAG
CAGCATCAGCAGCACTACGGTGCACCCCAGGCGACCTCTTCCGCTTCCTC
TTCCTCTCCAGCTCCTGGCGACGCTCTACCTCCAGCCGGCGATTCCCCTC
TGCGTCTCTTCATGGCACGTGGCGTGTGCCCTCGAGGCAAGTCTGAGATT
GATTATGAGAAGGATGTTGGTTTTTCGATGTCTAGCGTGTTCACGAGTGT
GGAGTCTGATGTGTCAATGCCTGGTGTTCCCCGCGTGCCTGCTGTGCATG
AAGGTTCTGATGATGAGTTCGGTGTCTCGACGTTTGGTGTGTCTACTCAT
GATGTACCCCGCGTGCCCGCTGTACTTGAGAGTCCTGATGAAGTGGTCGG
CGTTTCGGAGTGTGAT back to topCoding sequence (CDS) from alignment at Scaffold_420:493452..495767+ >EsuBft119_16a-0001 ID=EsuBft119_16a-0001|Name=EsuBft119_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1662bp|location=Sequence derived from alignment at Scaffold_420:493452..495767+ (Ectocarpus subulatus male Bft15b)
ATGCCGGACGGAGACGGACGACAGCCTCCGGGGGGATCAGGTCAGGCTGT
CCCTCCCCCCGGGGAAGGCGTCGCGGACGGAGGAGGGAGCGATTCTTTCT
TCGTCAACGATGCACGAGACCGAGGGGGTGCGCGAGCGGCAGGAGGGGAA
GATCAGCGCGACACGATGCGTGAGCTGGTTGACCTCTTCAAGCAGGCCTT
CGCGACATCAACTCATGACCAGGGGCACCGTGCCCACTCAGGCACGTCTA
GCAACCAGATCTTAGAACTGAGGCAGAGAGAAAAGATAGATGTACCAGTA
TGGAGTGATGACTATCTGAAGAACAGATCGATCGAAGTTGCATTGCGAGT
GTTCACGAGTGCTTTTGAAGCGTGGCTGGAGAGTGAGGGACTTGCTGGTG
TGATGAGGAGTTCAGAGGTCCCTGTTGGTGCAGCTGGTGTGGATTTGAAT
TGGTTGAGCAGCACGTTCGGAGAGGAGAGAGTGAAGCAATCCAGGAAGAT
TTGGACGTTTATGCTAGCTAAGATCACAGCACAACCCGTACAAGCCCAAA
TCTTGGCATCAGAATCACCTCAAGCAGGGTACCGCGTGTTTCTCGAACAA
TACAGCCAGGACAAGAGTCAGGAGCGACAAACTCTTGACGACGCATGGAA
CGTAATAGGCCAGAGGCAAGGAGAGAGTCTTATGGACTATTACGGTAGGG
CAGTTGCGCTGTGGATGAGACTTCGATCGTATGGTGATAACAGGGATGAA
AAGTCGATGTGCAGGCACATAGTACGGGGATTTCTCCCAAGGTTTGAGAA
AACTAAAGACCGTCTTCTGTTTGATTCGATGTTGTCGAGGGCTACAATGC
AGGAGATGCTGAGGTTGGAAGAGCACGAGCTGAGGTACGAGCGGAGGGCT
GCAGAGGGGAAGGAAGAGATGAGGCACGCCTTCGTCGCTGCCGGCGTGGG
CCGGGGCGGCGAGGCGGGGAAACCAGCCGCTGCAGGATCGGAGCAAGGCG
GACATCGACTCCAGCAACCACAAAGGTCGGTGCAGCCACATCAGCAGCAA
CCATCGCACTTCTGCCAGCTCCACGGCCCCAACAGCACCCACGAGACCTC
CGAATGTCACAAGTTACGCAACGAATTCCTCGCCCACTACAACGAGTTCT
GCGCGTACATGAGCGGGAGGCGGGAGGCCCAGGGGTCGGTCTTCCCTCGA
GGCGGAGCCCAAGACTCGGGGCGGATGGTTGGTGGCCCATCTCGACAGCA
GCCGTACCAAAACGAACAAGGTGCGGGCTGGAGTCGGGGCCACTCTCCAG
CGCTGCCGGGACCGCCGCGTGGGCCAGGATCCGGAGCTGGAGGACAGCTG
CAGGGGCGCAACTCTGGGGGGCGTGGGTATGGTAGATACGGTCCTTGCCC
CCCGGAGAGCCGAGGTCGTCAGATGGGCGGCCGTGGTGGCGGCGACATCA
CCTCGGGATGGGAGGCCACGTGGGCGCCCGGATCTACACCCAGCTGGACC
CCACCACCTCCTGAGGCAGACTACGGGTACGGGCTCGCGGCTCACGGAGT
GGACCATGGCGGAGGTCCCTNTGTACTGCGGCACTATTTTCCGGCTCATT
TCGCCATCGGAGGCGGAGAACCATCAGGCGGCGACATCACCTCGGGATGG
GAGGCCACGTNN back to top
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