Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft119_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 124 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | EF-hand domain pair |
| Ec32 ortholog | Ec-03_002220.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_10a-0001 ID=EsuBft119_10a-0001|Name=EsuBft119_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1248bp|location=Sequence derived from alignment at Scaffold_420:423737..425369- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCATGTTGACGGAAGCGCTCGAGACATCAATGAAGATTATCGACCC
AAGAGGGGGCTTCCCGAATCCAGTAGCGAGCCAATACTCTCTTCTGCTCA
GTCCAATTCAATCGTTGTCTTCTGACGTCACATCGTTGGCTAGTCACTGC
GGCTTCGAATTCAATTTTCGCAGCCACGGAGGCAGCAATTCTAGTATTTC
CTCCTCCATCCGAACAGCTCAACCATCCAACCACCAGCCGCATGAGCGAC
GGCATCAGCACCGCAACAGCGGGCAGCAGAACTCGGCTGACGCGCCGACG
TGGTCTCCTTCTCATGCTGGCGGCGATACCTCTCCCACAGCCGCCTTGTC
CGTCATGTCTTCGGGGGACGCAGACACTACCCCGCTCCCGGGCGTCTGCT
ACATCACGTACCCTCCGACACCAGACGTAGCGGCGGTTTCCTTGGCTTCT
CCGCCTGCAGAACGCGGCCTCGATGGCCCCCGCGCCCGTGCCCGCAACCG
CAGAAGCGATGTCGGCAGCGACGCCACTCAAATCGCTCGCGCCAGGAGAG
GGGACTCCTCTGTTGACCTTCCCGGTGACGTGGAAGAAGAAGAAACAGAA
GGGGGTGAGAACGGTTCAGCTGCAGCGGACGCTTCGCTACGGGAGACACA
CGAAGATGAGTGTTCGTTCACGGTGGGCGGTACTACCAACGCATCATCTC
CAGTCGGCAGCTGGCATCACGAAAGATGCGGCAACCGCGACATCGACGAT
ACTGGCGGTCCGGGCCGAACAAGTGGTGAGGAGGGTCAGCGGCAACGAGC
GCCCACGGAACAACCACCATTGGCCAGCGAAAAAAACGCGTTGAAACGAC
ACGTTGCCTACGACTTGGAAGAGGACTCGGGAAGCTACAAGTCCGGATTA
GTCGGGGCGGGGGAGATGGCGTCCATGGAGGGAATAACGGAGCAGGGATC
AGAACATCGAGCGGTGCCGAGGAGGCAGGCTGGGAAGGGCGGCGGCGGTG
GGGAACGGCCCATGCGGTGTGGTCAAAAGGTGATCTCGATGATGATTTCG
GATGGCCACCCGTTGGTGGCGTCGAGGGGGTTTCCATCGCTTCCTGGGGT
GGACGAGCACCAGCTCCCATCGTTCTGGCTGGCCGAGATGCACGACAACA
TGAGGAAAAACAGGCAAGCACGATCTCCCTCCTTCATACAAGAGTGTGTT
GTGGAGGCCTGTCGAGCAAGAGTTTTGTCCTCGTTCCTGCTATTGTAA back to topprotein sequence of EsuBft119_10a-0001 >EsuBft119_10 ID=EsuBft119_10|Name=EsuBft119_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=415bp
MFMLTEALETSMKIIDPRGGFPNPVASQYSLLLSPIQSLSSDVTSLASHC
GFEFNFRSHGGSNSSISSSIRTAQPSNHQPHERRHQHRNSGQQNSADAPT
WSPSHAGGDTSPTAALSVMSSGDADTTPLPGVCYITYPPTPDVAAVSLAS
PPAERGLDGPRARARNRRSDVGSDATQIARARRGDSSVDLPGDVEEEETE
GGENGSAAADASLRETHEDECSFTVGGTTNASSPVGSWHHERCGNRDIDD
TGGPGRTSGEEGQRQRAPTEQPPLASEKNALKRHVAYDLEEDSGSYKSGL
VGAGEMASMEGITEQGSEHRAVPRRQAGKGGGGGERPMRCGQKVISMMIS
DGHPLVASRGFPSLPGVDEHQLPSFWLAEMHDNMRKNRQARSPSFIQECV
VEACRARVLSSFLLL back to topmRNA from alignment at Scaffold_420:423737..425369- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_10a-0001 ID=EsuBft119_10a-0001|Name=EsuBft119_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1633bp|location=Sequence derived from alignment at Scaffold_420:423737..425369- (Ectocarpus subulatus male Bft15b)
ATGTTCATGTTGACGGAAGCGCTCGAGACATCAATGAAGATTATCGACCC
AAGAGGGGGCTTCCCGAATCCAGTAGCGAGCCAATACTCTCTTCTGCTCA
GGTACGTATGCTTCTTTGCCGTCAACTGCACACTGTGCAGATGCAAATCT
TCGTCGTGCTTGACATCATTTTATGTGGTGCAGTCCAATTCAAGTAAGCG
TGTCACCACAGCCCAACCTTCCCCGCACGACCTTTCCAGAGTTCCATGTA
GATATGATGTGCAACTCTTTGCTGGTTGTGGATTGAGTAGTACGGCTGGC
GTCAAAGTTGGACTCGTCAGGGTTTCTTGTGTCCTCGGACATCACCAGAG
TATCCGGAGGCCTCCCGGAACCTGCCTCTGACTACGCCCACTGCACCTTC
CCAGCCTCCGTGTCTCGAGCTACGTGACCCTCTGCTCTAACTCTTACTCG
TGTCACGTCCAAACCGTGAATCGCTACGTTTCGTTCCCTTGCTCAGTCGT
TGTCTTCTGACGTCACATCGTTGGCTAGTCACTGCGGCTTCGAATTCAAT
TTTCGCAGCCACGGAGGCAGCAATTCTAGTATTTCCTCCTCCATCCGAAC
AGCTCAACCATCCAACCACCAGCCGCATGAGCGACGGCATCAGCACCGCA
ACAGCGGGCAGCAGAACTCGGCTGACGCGCCGACGTGGTCTCCTTCTCAT
GCTGGCGGCGATACCTCTCCCACAGCCGCCTTGTCCGTCATGTCTTCGGG
GGACGCAGACACTACCCCGCTCCCGGGCGTCTGCTACATCACGTACCCTC
CGACACCAGACGTAGCGGCGGTTTCCTTGGCTTCTCCGCCTGCAGAACGC
GGCCTCGATGGCCCCCGCGCCCGTGCCCGCAACCGCAGAAGCGATGTCGG
CAGCGACGCCACTCAAATCGCTCGCGCCAGGAGAGGGGACTCCTCTGTTG
ACCTTCCCGGTGACGTGGAAGAAGAAGAAACAGAAGGGGGTGAGAACGGT
TCAGCTGCAGCGGACGCTTCGCTACGGGAGACACACGAAGATGAGTGTTC
GTTCACGGTGGGCGGTACTACCAACGCATCATCTCCAGTCGGCAGCTGGC
ATCACGAAAGATGCGGCAACCGCGACATCGACGATACTGGCGGTCCGGGC
CGAACAAGTGGTGAGGAGGGTCAGCGGCAACGAGCGCCCACGGAACAACC
ACCATTGGCCAGCGAAAAAAACGCGTTGAAACGACACGTTGCCTACGACT
TGGAAGAGGACTCGGGAAGCTACAAGTCCGGATTAGTCGGGGCGGGGGAG
ATGGCGTCCATGGAGGGAATAACGGAGCAGGGATCAGAACATCGAGCGGT
GCCGAGGAGGCAGGCTGGGAAGGGCGGCGGCGGTGGGGAACGGCCCATGC
GGTGTGGTCAAAAGGTGATCTCGATGATGATTTCGGATGGCCACCCGTTG
GTGGCGTCGAGGGGGTTTCCATCGCTTCCTGGGGTGGACGAGCACCAGCT
CCCATCGTTCTGGCTGGCCGAGATGCACGACAACATGAGGAAAAACAGGC
AAGCACGATCTCCCTCCTTCATACAAGAGTGTGTTGTGGAGGCCTGTCGA
GCAAGAGTTTTGTCCTCGTTCCTGCTATTGTAA back to topCoding sequence (CDS) from alignment at Scaffold_420:423737..425369- >EsuBft119_10a-0001 ID=EsuBft119_10a-0001|Name=EsuBft119_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1248bp|location=Sequence derived from alignment at Scaffold_420:423737..425369- (Ectocarpus subulatus male Bft15b)
ATGTTCATGTTGACGGAAGCGCTCGAGACATCAATGAAGATTATCGACCC
AAGAGGGGGCTTCCCGAATCCAGTAGCGAGCCAATACTCTCTTCTGCTCA
GTCCAATTCAATCGTTGTCTTCTGACGTCACATCGTTGGCTAGTCACTGC
GGCTTCGAATTCAATTTTCGCAGCCACGGAGGCAGCAATTCTAGTATTTC
CTCCTCCATCCGAACAGCTCAACCATCCAACCACCAGCCGCATGAGCGAC
GGCATCAGCACCGCAACAGCGGGCAGCAGAACTCGGCTGACGCGCCGACG
TGGTCTCCTTCTCATGCTGGCGGCGATACCTCTCCCACAGCCGCCTTGTC
CGTCATGTCTTCGGGGGACGCAGACACTACCCCGCTCCCGGGCGTCTGCT
ACATCACGTACCCTCCGACACCAGACGTAGCGGCGGTTTCCTTGGCTTCT
CCGCCTGCAGAACGCGGCCTCGATGGCCCCCGCGCCCGTGCCCGCAACCG
CAGAAGCGATGTCGGCAGCGACGCCACTCAAATCGCTCGCGCCAGGAGAG
GGGACTCCTCTGTTGACCTTCCCGGTGACGTGGAAGAAGAAGAAACAGAA
GGGGGTGAGAACGGTTCAGCTGCAGCGGACGCTTCGCTACGGGAGACACA
CGAAGATGAGTGTTCGTTCACGGTGGGCGGTACTACCAACGCATCATCTC
CAGTCGGCAGCTGGCATCACGAAAGATGCGGCAACCGCGACATCGACGAT
ACTGGCGGTCCGGGCCGAACAAGTGGTGAGGAGGGTCAGCGGCAACGAGC
GCCCACGGAACAACCACCATTGGCCAGCGAAAAAAACGCGTTGAAACGAC
ACGTTGCCTACGACTTGGAAGAGGACTCGGGAAGCTACAAGTCCGGATTA
GTCGGGGCGGGGGAGATGGCGTCCATGGAGGGAATAACGGAGCAGGGATC
AGAACATCGAGCGGTGCCGAGGAGGCAGGCTGGGAAGGGCGGCGGCGGTG
GGGAACGGCCCATGCGGTGTGGTCAAAAGGTGATCTCGATGATGATTTCG
GATGGCCACCCGTTGGTGGCGTCGAGGGGGTTTCCATCGCTTCCTGGGGT
GGACGAGCACCAGCTCCCATCGTTCTGGCTGGCCGAGATGCACGACAACA
TGAGGAAAAACAGGCAAGCACGATCTCCCTCCTTCATACAAGAGTGTGTT
GTGGAGGCCTGTCGAGCAAGAGTTTTGTCCTCGTTCCTGCTATTGTAA back to top
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