EsuBft1192_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1192_9a-0001
Unique NameEsuBft1192_9a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_82contigScaffold_82:136804..138931 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
SymbolkatG
StatusManually annotated
Seed ortholog2880.D7G523
ProteomeIdEsuBft1192_9
Protein domainsIPR002016
Protein domainsIPR010255
Protein domainsTMhelix
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsPS51257
Protein domainsSignalP-TM
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSignalP-noTM
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsSIGNAL_PEPTIDE
Protein domainsG3DSA
Protein domainsPTHR30555
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsIPR002207
Ownerapollo_admin@sb-roscoff.fr
Notecatalase-peroxidase os:escherichia coli gn:katg pe:3 sv:1 [Automatic annotation]
Nb exon2
Max annot lvl2759|Eukaryota
Length1660
Hectar predicted targeting categorysignal peptide
Evalue9.94e-107
EggNOG OGsCOG0685@1|root,2QTDY@2759|Eukaryota
Date last modified2016-08-23
Date creation2016-06-14
Preferred namekatG
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
EC1.11.1.21
Descriptioncatalase-peroxidase
Descriptioncatalase activity
COG categoryE
BRITEko00000,ko00001,ko01000
Cross References
External references for this mRNA
DatabaseAccession
GO0004601
GO0020037
EC1.11.1.21
GO0055114
GO0006979
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1192_9aEsuBft1192_9aEctocarpus subulatus male Bft15bgeneScaffold_82 136804..138931 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1192_9a-0001-exonEsuBft1192_9a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_82 136804..136968 +
EsuBft1192_9a-0001-exonagat-exon-21849Ectocarpus subulatus male Bft15bexonScaffold_82 137437..138931 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1192_9a-0001-cdsEsuBft1192_9a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_82 136804..136968 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1192_9a-0001-exonagat-three_prime_utr-1847Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_82 138034..138931 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1192_9a-0001EsuBft1192_9Ectocarpus subulatus male Bft15bpolypeptideScaffold_82 136804..138033 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1192_9a-0001 ID=EsuBft1192_9a-0001|Name=EsuBft1192_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1660bp|location=Sequence derived from alignment at Scaffold_82:136804..138931+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGCGCACGTGCGAAATCGGGGTCTTGGCCGCGCTGGCGTTGTTTGC
TACGCCCGCATTCGGCGGCTGCCCGTTCCTCTCGGGTCAGAATGTTAGAG
AGGATATGTTGCCTGCAAGCGGATGCATGCACGGGGTAGTGGACAAGCAG
ATGGAAATGCTAAACGAGGACGCGATGAACGCCGGCGGGGATCGCGCCCT
GATGTCCTCCTCCTCGTACGACAGCAGCTCCAGTGGCGCCGACTTCTCCA
GCGAGACCTACCAGGCCCTCCAGGCGGACATCACGGCCATGTTCACCGAA
TCTCAGGACTTCTGGCCGGCCGACTTCGGCAATAACGTGCCCTTCATGAT
CCGTCTGGCCTGGCACTGCAACGGCAACTACCGCCAGTCGGACGGCCGCG
GCGGTTGCGACGGTGGCCGGATACGCTTCAACCCGGAGCGAAGCTGGGCC
GACAACACGAACCTCGACAAGTCGCTGACCCTCCTGCAGCCCATCAAGCT
CAAGGACGGTGACGCCGTCTCGTGGGGGGACCTCATCACCCTGACGGGTA
ACGAGGCGATCCGGTCGATGGGGGGCCCCGTGCTGGGGCTCTGCGCCGGG
AGGCAGGACGATGCCTCCGGCGTGGACAGCCTGGAGCTGGGCCCCTTTTC
CGAGCAGGAGGCGGTCGCTCCGTGCGCCGTGAACGGGACGTGCGAGGTCG
GCACCAGCACGGTCGGGCTGATCTACGGTAAGGTGGTGTCGTTTCGTTTC
CTGGAGAGCTAGGTTGAGGATGAGGGAAACGATTTTCAACCAAACTACGA
AATGTATTTCTCATGACATGAAACACATTTTTTCGCGTGAACGTAGTGGC
GAGGCTCGGTTTGCCCGTGGCGACCCCGCGGCTAAAACCCCTTTCGTGAT
CTGGAAAACGCTTGCCGCCCCTCCCCCCGCCCTGCAGGAAGGACACCGTA
GAACGTACACTAATCTGCGCGCTTTTCCACCCCTGTTGTGTCGTCCCGCT
TGGATCATGACCGTGTGGAGTGCACCTCTCGAGCTGGCCAAAGGCGTCCG
GTTCGTGCTTCACATAACCATTTATTACAACGGCAACGCAACCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGTGTTGAGT
GGTGATAGCTGCATACTGAAACCTCACAGATGGATTGGTTTTTGAGTTTG
CCAGACACATAGACGCGCTGCTTGGGGATAGCTACATACTGAAACCTCAC
GGGTTGAGTGATGTTGGATAGTGCCGGACACATAGACGCTTTGAGTGAGG
AAAGACACATACTGAAACCTAACAGTTGGTTTGTATTGGAGATTGCCGGA
CACATTGACATGTTGAGTGAGGATAGCTGCATACTGAAACCTCACAGATG
GATTGGTTTTTGAGTTTGCCAGACACATAGACGCGTTGCGTGGGGATAGC
TACATACTGA
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protein sequence of EsuBft1192_9a-0001

>EsuBft1192_9 ID=EsuBft1192_9|Name=EsuBft1192_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=253bp
MRRTCEIGVLAALALFATPAFGGCPFLSGQNVREDMLPASGCMHGVVDKQ
MEMLNEDAMNAGGDRALMSSSSYDSSSSGADFSSETYQALQADITAMFTE
SQDFWPADFGNNVPFMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWA
DNTNLDKSLTLLQPIKLKDGDAVSWGDLITLTGNEAIRSMGGPVLGLCAG
RQDDASGVDSLELGPFSEQEAVAPCAVNGTCEVGTSTVGLIYGKVVSFRF
LES
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mRNA from alignment at Scaffold_82:136804..138931+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1192_9a-0001 ID=EsuBft1192_9a-0001|Name=EsuBft1192_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2128bp|location=Sequence derived from alignment at Scaffold_82:136804..138931+ (Ectocarpus subulatus male Bft15b)
ATGCGGCGCACGTGCGAAATCGGGGTCTTGGCCGCGCTGGCGTTGTTTGC
TACGCCCGCATTCGGCGGCTGCCCGTTCCTCTCGGGTCAGAATGTTAGAG
AGGATATGTTGCCTGCAAGCGGATGCATGCACGGGGTAGTGGACAAGCAG
ATGGAAATGCTAAACGTACGACATCATGCCTTGGCACACATATTGTGACT
TGAATTCTTGGTCTCATGTCTTCGACCGAGCGACATCGTGTAGCCTGACC
CAACACCGTCACCTCAGGAAAGGTCTTCCACCTGGCGGCAGCTGTGCGTT
TTTGCGGTTTTCGGCTGGTCTGCTTGGTTGGGTATGGAACTGGACACTTT
TCATCCGTTCTGGTGCTGTACAATACTTGGCGTACCCATGTTGTGGACAA
CAGTCCCCTGTTCTAAGCACGCAGCGTCGGGTGGAGGAAGGAGCTCACTG
GAGATGTTGTGTGAAGCATCTACCGTTGGTCGCAGACGCGGTATGTATGT
GGTGATCCTCTGCGCCAGCTCTTCGATGTAGAGGGATGAGACCACGCCGC
TTCAACCCTCAAGGGCCTCCGCCATGTATACCCCACTCCTATCCGCCTGA
CCGATATCATCTCTCGCAACACCCGCTTATCAGGAGGACGCGATGAACGC
CGGCGGGGATCGCGCCCTGATGTCCTCCTCCTCGTACGACAGCAGCTCCA
GTGGCGCCGACTTCTCCAGCGAGACCTACCAGGCCCTCCAGGCGGACATC
ACGGCCATGTTCACCGAATCTCAGGACTTCTGGCCGGCCGACTTCGGCAA
TAACGTGCCCTTCATGATCCGTCTGGCCTGGCACTGCAACGGCAACTACC
GCCAGTCGGACGGCCGCGGCGGTTGCGACGGTGGCCGGATACGCTTCAAC
CCGGAGCGAAGCTGGGCCGACAACACGAACCTCGACAAGTCGCTGACCCT
CCTGCAGCCCATCAAGCTCAAGGACGGTGACGCCGTCTCGTGGGGGGACC
TCATCACCCTGACGGGTAACGAGGCGATCCGGTCGATGGGGGGCCCCGTG
CTGGGGCTCTGCGCCGGGAGGCAGGACGATGCCTCCGGCGTGGACAGCCT
GGAGCTGGGCCCCTTTTCCGAGCAGGAGGCGGTCGCTCCGTGCGCCGTGA
ACGGGACGTGCGAGGTCGGCACCAGCACGGTCGGGCTGATCTACGGTAAG
GTGGTGTCGTTTCGTTTCCTGGAGAGCTAGGTTGAGGATGAGGGAAACGA
TTTTCAACCAAACTACGAAATGTATTTCTCATGACATGAAACACATTTTT
TCGCGTGAACGTAGTGGCGAGGCTCGGTTTGCCCGTGGCGACCCCGCGGC
TAAAACCCCTTTCGTGATCTGGAAAACGCTTGCCGCCCCTCCCCCCGCCC
TGCAGGAAGGACACCGTAGAACGTACACTAATCTGCGCGCTTTTCCACCC
CTGTTGTGTCGTCCCGCTTGGATCATGACCGTGTGGAGTGCACCTCTCGA
GCTGGCCAAAGGCGTCCGGTTCGTGCTTCACATAACCATTTATTACAACG
GCAACGCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGACGTGTTGAGTGGTGATAGCTGCATACTGAAACCTCACAGATG
GATTGGTTTTTGAGTTTGCCAGACACATAGACGCGCTGCTTGGGGATAGC
TACATACTGAAACCTCACGGGTTGAGTGATGTTGGATAGTGCCGGACACA
TAGACGCTTTGAGTGAGGAAAGACACATACTGAAACCTAACAGTTGGTTT
GTATTGGAGATTGCCGGACACATTGACATGTTGAGTGAGGATAGCTGCAT
ACTGAAACCTCACAGATGGATTGGTTTTTGAGTTTGCCAGACACATAGAC
GCGTTGCGTGGGGATAGCTACATACTGA
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Coding sequence (CDS) from alignment at Scaffold_82:136804..138931+

>EsuBft1192_9a-0001 ID=EsuBft1192_9a-0001|Name=EsuBft1192_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=762bp|location=Sequence derived from alignment at Scaffold_82:136804..138931+ (Ectocarpus subulatus male Bft15b)
ATGCGGCGCACGTGCGAAATCGGGGTCTTGGCCGCGCTGGCGTTGTTTGC
TACGCCCGCATTCGGCGGCTGCCCGTTCCTCTCGGGTCAGAATGTTAGAG
AGGATATGTTGCCTGCAAGCGGATGCATGCACGGGGTAGTGGACAAGCAG
ATGGAAATGCTAAACGAGGACGCGATGAACGCCGGCGGGGATCGCGCCCT
GATGTCCTCCTCCTCGTACGACAGCAGCTCCAGTGGCGCCGACTTCTCCA
GCGAGACCTACCAGGCCCTCCAGGCGGACATCACGGCCATGTTCACCGAA
TCTCAGGACTTCTGGCCGGCCGACTTCGGCAATAACGTGCCCTTCATGAT
CCGTCTGGCCTGGCACTGCAACGGCAACTACCGCCAGTCGGACGGCCGCG
GCGGTTGCGACGGTGGCCGGATACGCTTCAACCCGGAGCGAAGCTGGGCC
GACAACACGAACCTCGACAAGTCGCTGACCCTCCTGCAGCCCATCAAGCT
CAAGGACGGTGACGCCGTCTCGTGGGGGGACCTCATCACCCTGACGGGTA
ACGAGGCGATCCGGTCGATGGGGGGCCCCGTGCTGGGGCTCTGCGCCGGG
AGGCAGGACGATGCCTCCGGCGTGGACAGCCTGGAGCTGGGCCCCTTTTC
CGAGCAGGAGGCGGTCGCTCCGTGCGCCGTGAACGGGACGTGCGAGGTCG
GCACCAGCACGGTCGGGCTGATCTACGGTAAGGTGGTGTCGTTTCGTTTC
CTGGAGAGCTAG
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