Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FYJ3 |
ProteomeId | EsuBft1180_2 |
Protein domains | IPR012816 |
Protein domains | PTHR11079 |
Protein domains | SSF143990 |
Owner | apollo_admin@sb-roscoff.fr |
Note | Uncharacterized protein R617 OS:Acanthamoeba polyphaga mimivirus GN:MIMI [Automatic annotation] |
Nb exon | 4 |
Max annot lvl | 2759|Eukaryota |
Length | 2256 |
Hectar predicted targeting category | other localisation |
Evalue | 9.57e-49 |
EggNOG OGs | COG3236@1|root,2S4FY@2759|Eukaryota |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
KEGG ko | ko:K09935 |
Description | Domain of unknown function (DUF1768) |
COG category | S |
BRITE | ko00000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1180_2a-0001 ID=EsuBft1180_2a-0001|Name=EsuBft1180_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2256bp|location=Sequence derived from alignment at Scaffold_106:172749..176081- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGACAAGCTGAAGCCGGAACAACTTGATAGTGTCACACGCTTGCCCCT CGGTCCTGATCCTGATGAATTTGCTCGCTTCGCGTCTAGCTGCAAGGGTG TGGTCACAGAGATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGACTTTC AGTTCCTCCACCTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAACGTGT CCGTGCTGCTGTCGTTGAAGGCCAAACCACCAACCGTGCCACTCTGGAAT TTCTTGATGCCACCTTCCTACAGGTAGAAAACCATCTGCGCAAGGAACCG GCAGGGCCCTCGACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCTG GGACACTCAAGACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGCG TATCCAACGGCGAGACTTACGGAGAATACATCCGTCGCTATAAGGCTCTG GCCATGACCGTCATGGTTTCCCACCACGCGTTCAAGCCTTCGGATGCGCA AGTGCAGATAGCTGTTCGAGACTCCATGTTGAAACAGTTTCCGGTAGTGT CTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGGG CGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGACAAGCGTGC GTTCGCGCACACGCCGGCGGTACATGGAGATGATTTCTTTTCGGTATCTT CCACGAATGCTAGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCTTCG GCGTTGCGTTCGACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGCCGC CGTGATGAGTGTTGACCCTCTACCTAATGATGATCGGGACCCTTTTCTGT TGCACTACAGCGACTGGCCGTTGCAAGGACACTTCCAAGAGGTGTACAAC GTCGCTAGTGAGATGGCTCTAACCAAGAATGATCCGCCATTGTTCACCCC CTTGGTCTCGGCTGAAGAGCGCCGCAACGCGCTTCGACTGTACAAGGGCA AGTGCCTCAACTGCTTGGGAGAAGACCACTCCTTCAAATCCTGGAGCCGA ATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGCCGCCCTAAGGCCGCC CTCCGGATCACGGAGCGTTGCGACTTCGCCCGCTCCTGCCTCGCTTTCTG GGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCCTGGTCCACCCCCGCCT GTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGCACCGGCTCCGCCGTT TGATGACAAGTGCGAGTACGCTTCGGATGACGTCCTTCTTTTCTGGAAAC CTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCTTTTGACGTACTGGGG GTACGTTATTCATGTGGTGAGCAATTCATGATGTCTGAAAAAGCGAAGTT GTTTGGAGATATGACGTCGTATGACAAAATTATGGCTGCAACAGATCCTA AGACACACAAGTTTTTGGGTCGAAATGTGCGTCCTTTCGACTATGCTGAA TGGGAGCGTCGTCGTGAAGAGATCGTGCTTACGGGGTCGTACGCCAAATT TGCTCAAAACCATGACATGAAACATCATCTACTGGAGACGGGTACCCGCC TCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGGGGTATCGGCATGTCT GCATGCTTTCCAGATGCTAGCGATTCATCCAAGTGGGCGGCTAGCGGTTC TTCGCTACGGAAGGACCCGGGCGAAGACCCAGCTTGTCTACGTTTGGACG CTCCGGGGGACCATGCTCCTGGCGTTCATCTGGTGGCATCGACCTCCGCT TGTGCAGACCAGCCTCCTCTTCTCGAACATGGGCCCGATCTGGTCGGCGG CACGCTCCTGTTGGACTCGGACTCATACACCACCCGGGTCCTGCTGCATG GAGGACCTACAGCCACTTCTCAACTCGCGCGAGTGGCGCTTCTGGACTCT GGGTCTCCTGCATCCTTCGTTTCCGACTCCGTGGTCACCGCCATGATAGC TGCCGGAGCCCTGACAGCTGGCAGCGTTCGTGTTTTGCCCTTTCGTCGTT GGGGTGGGTTTGGTGATGGACCCGCCCTTGTGACCACCCGGTCGATTGGT CTCACCGTTAATTTTCTCCATGGAGATAGAGCTACCGCTTCCTTGGCGGT CTGGGCCTGTGTTGTTCCAGACGCCGCCATGGGGCACGCCGTGCTTCTGG GTCGTGATAGCTGGATGAGCTTCAACTCTCGCGTGTTCACCACCCTCCCC CANNNN back to topprotein sequence of EsuBft1180_2a-0001 >EsuBft1180_2 ID=EsuBft1180_2|Name=EsuBft1180_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=752bp
MDKLKPEQLDSVTRLPLGPDPDEFARFASSCKGVVTEILNKSDVKRKQTF SSSTWVTGWLPLLRKRVRAAVVEGQTTNRATLEFLDATFLQVENHLRKEP AGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKAL AMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFG RHASCLDDMWDVLDKRAFAHTPAVHGDDFFSVSSTNARSSSAVSRAVASS ALRSTVTPSWSQGSSAAVMSVDPLPNDDRDPFLLHYSDWPLQGHFQEVYN VASEMALTKNDPPLFTPLVSAEERRNALRLYKGKCLNCLGEDHSFKSWSR MASANIDPAGAAALRPPSGSRSVATSPAPASLSGSSPSEKRTRPPGPPPP VPGARSLPLRPAPAPPFDDKCEYASDDVLLFWKPPSVFSQWTPSAFDVLG VRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAE WERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMS ACFPDASDSSKWAASGSSLRKDPGEDPACLRLDAPGDHAPGVHLVASTSA CADQPPLLEHGPDLVGGTLLLDSDSYTTRVLLHGGPTATSQLARVALLDS GSPASFVSDSVVTAMIAAGALTAGSVRVLPFRRWGGFGDGPALVTTRSIG LTVNFLHGDRATASLAVWACVVPDAAMGHAVLLGRDSWMSFNSRVFTTLP XX back to topmRNA from alignment at Scaffold_106:172749..176081- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1180_2a-0001 ID=EsuBft1180_2a-0001|Name=EsuBft1180_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3333bp|location=Sequence derived from alignment at Scaffold_106:172749..176081- (Ectocarpus subulatus male Bft15b) ATGGACAAGCTGAAGCCGGAACAACTTGATAGTGTCACACGCTTGCCCCT
CGGTCCTGATCCTGATGAATTTGCTCGCTTCGCGTCTAGCTGCAAGGGTG
TGGTCACAGAGATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGACTTTC
AGTTCCTCCACCTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAACGTGT
CCGTGCTGCTGTCGTTGAAGGCCAAACCACCAACCGTGCCACTCTGGAAT
TTCTTGATGCCACCTTCCTACAGGTAGAAAACCATCTGCGCAAGGAACCG
GCAGGGCCCTCGACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCTG
GGACACTCAAGACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGCG
TATCCAACGGCGAGACTTACGGAGAATACATCCGTCGCTATAAGGCTCTG
GCCATGACCGTCATGGTTTCCCACCACGCGTTCAAGCCTTCGGATGCGCA
AGTGCAGATAGCTGTTCGAGACTCCATGTTGAAACAGTTTCCGGTAGTGT
CTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGGG
CGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGACAAGCGTGC
GTTCGCGCACACGCCGGCGGTACATGGAGATGATTTCTTTTCGGTATCTT
CCACGAATGCTAGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCTTCG
GCGTTGCGTTCGACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGCCGC
CGTGATGAGTGTTGACCCTCTACCTAATGATGATCGGGACCCTTTTCTGT
TGCACTACAGCGACTGGCCGTTGCAAGGACACTTCCAAGAGGTGTACAAC
GTCGCTAGTGAGATGGCTCTAACCAAGAATGATCCGCCATTGTTCACCCC
CTTGGTCTCGGCTGAAGAGCGCCGCAACGCGCTTCGACTGTACAAGGGCA
AGTGCCTCAACTGCTTGGGAGAAGACCACTCCTTCAAATCCTGTAATCGT
GGTTTCGTGAACGCCACCGGCCTGCTTAACAATGACATCAAGTTCTGTAT
GGAAAAAGATCCCACCCTTTGGGGTCGGTGGAAAAAGCGCATGACCTCGT
ATAGACGCCCTACAGGACGCAACCCACATCGAAATCACCCCTTAGGACGC
GCCCGCCGCTCATCTGACACATCGGACACGAAACAGTCCTCACACACAGA
GCACTCGTCGGACGCTTCCACTTCGACAAAAAGGGGCTGAAGGGGTAAGA
AATGACAAGCCGATGGCGGAGTTCAGCCGGTACTACCGTCAACAGCAACC
ACCGTGCACCCTTTTGGAGTCTCCCAACATGTTCGTGTACAGCCTATTTC
TTTGGATACTCCCCACGCTCCTAAATCACATCTAGTTTCTCGGCCCGCCT
CCTCGTCGTCCGCCTCATCGCCTGCTGGTAATGGACATGACAGACCCATT
TCGGCACTACCTTTGTGGTGTGGGCGACAGGGAGGTAAGACGTCGAGCGG
TCCATCCCTGCTCACCTCGTCGTCTCGGGTTACAGAAGGAACAAGAACCT
CGTCTTCTACTATTCGTCAAGACTCTCCTGGTGTTGTCAGCCGGGCCTCT
TCTCGGATCGCACACGAGCCTTCTTCTACACTCGTCGGGAACCCCGTCGA
TCCTCCTTCTCTTTCGCAGCTTTCGTTGTCTTCGACCGTCCGCTGCCCCC
GTGTGACAGCACCTGATACGAATGCGACTTCCTCTGCTGCCCACCACGTG
CTGACTGCACCACTGCCATCGGGATCGGATGGTAGTGCCCACCATTCTGT
GGAAGGTTCGGCTCCTTTGTCAAGGGGGAGTAGTCAAGAGCGCCCTGCGT
CAATGATCAAACATCCGTCTGTTGCAGGAATGACTTCTCCTAACGAACGG
GTCTCTAATAGCCGAATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGC
CGCCCTAAGGCCGCCCTCCGGATCACGGAGCGTTGCGACTTCGCCCGCTC
CTGCCTCGCTTTCTGGGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCCT
GGTCCACCCCCGCCTGTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGC
ACCGGCTCCGCCGTTTGATGACAAGTGCGAGTACGCTTCGGATGACGTCC
TTCTTTTCTGGAAACCTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCT
TTTGACGTACTGGGGGTACGTTATTCATGTGGTGAGCAATTCATGATGTC
TGAAAAAGCGAAGTTGTTTGGAGATATGACGTCGTATGACAAAATTATGG
CTGCAACAGATCCTAAGACACACAAGTTTTTGGGTCGAAATGTGCGTCCT
TTCGACTATGCTGAATGGGAGCGTCGTCGTGAAGAGATCGTGCTTACGGG
GTCGTACGCCAAATTTGCTCAAAACCATGACATGAAACATCATCTACTGG
AGACGGGTACCCGCCTCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGG
GGTATCGGCATGTCTGCATGCTTTCCAGATGCTAGCGATTCATCCAAGTG
GGCGGCTAGCGGTAAAAACTTGTTGGGAAAAGCTTTGATGGAAGTTCGAC
GCCTTTTGCGTGATCATCCCCTGTCTGGTGAAGATTTCCCCGTTTCCAAT
TCTCTCACGCCCCCCATTTCGCATCCTCCTCTCCATAGACATCGACGCAT
TCATGAGGTTGCTACTGCTACAGGTTCTTCGCTACGGAAGGACCCGGGCG
AAGACCCAGCTTGTCTACGTTTGGACGCTCCGGGGGACCATGCTCCTGGC
GTTCATCTGGTGGCATCGACCTCCGCTTGTGCAGACCAGCCTCCTCTTCT
CGAACATGGGCCCGATCTGGTCGGCGGCACGCTCCTGTTGGACTCGGACT
CATACACCACCCGGGTCCTGCTGCATGGAGGACCTACAGCCACTTCTCAA
CTCGCGCGAGTGGCGCTTCTGGACTCTGGGTCTCCTGCATCCTTCGTTTC
CGACTCCGTGGTCACCGCCATGATAGCTGCCGGAGCCCTGACAGCTGGCA
GCGTTCGTGTTTTGCCCTTTCGTCGTTGGGGTGGGTTTGGTGATGGACCC
GCCCTTGTGACCACCCGGTCGATTGGTCTCACCGTTAATTTTCTCCATGG
AGATAGAGCTACCGCTTCCTTGGCGGTCTGGGCCTGTGTTGTTCCAGACG
CCGCCATGGGGCACGCCGTGCTTCTGGGTCGTGATAGCTGGATGAGCTTC
AACTCTCGCGTGTTCACCACCCTCCCCCANNNN back to topCoding sequence (CDS) from alignment at Scaffold_106:172749..176081- >EsuBft1180_2a-0001 ID=EsuBft1180_2a-0001|Name=EsuBft1180_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2256bp|location=Sequence derived from alignment at Scaffold_106:172749..176081- (Ectocarpus subulatus male Bft15b) ATGGACAAGCTGAAGCCGGAACAACTTGATAGTGTCACACGCTTGCCCCT CGGTCCTGATCCTGATGAATTTGCTCGCTTCGCGTCTAGCTGCAAGGGTG TGGTCACAGAGATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGACTTTC AGTTCCTCCACCTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAACGTGT CCGTGCTGCTGTCGTTGAAGGCCAAACCACCAACCGTGCCACTCTGGAAT TTCTTGATGCCACCTTCCTACAGGTAGAAAACCATCTGCGCAAGGAACCG GCAGGGCCCTCGACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCTG GGACACTCAAGACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGCG TATCCAACGGCGAGACTTACGGAGAATACATCCGTCGCTATAAGGCTCTG GCCATGACCGTCATGGTTTCCCACCACGCGTTCAAGCCTTCGGATGCGCA AGTGCAGATAGCTGTTCGAGACTCCATGTTGAAACAGTTTCCGGTAGTGT CTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGGG CGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGACAAGCGTGC GTTCGCGCACACGCCGGCGGTACATGGAGATGATTTCTTTTCGGTATCTT CCACGAATGCTAGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCTTCG GCGTTGCGTTCGACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGCCGC CGTGATGAGTGTTGACCCTCTACCTAATGATGATCGGGACCCTTTTCTGT TGCACTACAGCGACTGGCCGTTGCAAGGACACTTCCAAGAGGTGTACAAC GTCGCTAGTGAGATGGCTCTAACCAAGAATGATCCGCCATTGTTCACCCC CTTGGTCTCGGCTGAAGAGCGCCGCAACGCGCTTCGACTGTACAAGGGCA AGTGCCTCAACTGCTTGGGAGAAGACCACTCCTTCAAATCCTGGAGCCGA ATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGCCGCCCTAAGGCCGCC CTCCGGATCACGGAGCGTTGCGACTTCGCCCGCTCCTGCCTCGCTTTCTG GGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCCTGGTCCACCCCCGCCT GTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGCACCGGCTCCGCCGTT TGATGACAAGTGCGAGTACGCTTCGGATGACGTCCTTCTTTTCTGGAAAC CTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCTTTTGACGTACTGGGG GTACGTTATTCATGTGGTGAGCAATTCATGATGTCTGAAAAAGCGAAGTT GTTTGGAGATATGACGTCGTATGACAAAATTATGGCTGCAACAGATCCTA AGACACACAAGTTTTTGGGTCGAAATGTGCGTCCTTTCGACTATGCTGAA TGGGAGCGTCGTCGTGAAGAGATCGTGCTTACGGGGTCGTACGCCAAATT TGCTCAAAACCATGACATGAAACATCATCTACTGGAGACGGGTACCCGCC TCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGGGGTATCGGCATGTCT GCATGCTTTCCAGATGCTAGCGATTCATCCAAGTGGGCGGCTAGCGGTTC TTCGCTACGGAAGGACCCGGGCGAAGACCCAGCTTGTCTACGTTTGGACG CTCCGGGGGACCATGCTCCTGGCGTTCATCTGGTGGCATCGACCTCCGCT TGTGCAGACCAGCCTCCTCTTCTCGAACATGGGCCCGATCTGGTCGGCGG CACGCTCCTGTTGGACTCGGACTCATACACCACCCGGGTCCTGCTGCATG GAGGACCTACAGCCACTTCTCAACTCGCGCGAGTGGCGCTTCTGGACTCT GGGTCTCCTGCATCCTTCGTTTCCGACTCCGTGGTCACCGCCATGATAGC TGCCGGAGCCCTGACAGCTGGCAGCGTTCGTGTTTTGCCCTTTCGTCGTT GGGGTGGGTTTGGTGATGGACCCGCCCTTGTGACCACCCGGTCGATTGGT CTCACCGTTAATTTTCTCCATGGAGATAGAGCTACCGCTTCCTTGGCGGT CTGGGCCTGTGTTGTTCCAGACGCCGCCATGGGGCACGCCGTGCTTCTGG GTCGTGATAGCTGGATGAGCTTCAACTCTCGCGTGTTCACCACCCTCCCC CANNNN back to top
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