Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1178_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 254 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1178_8a-0001 ID=EsuBft1178_8a-0001|Name=EsuBft1178_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2545bp|location=Sequence derived from alignment at Scaffold_68:103071..105773+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTAAACCCACCATAGCCCAAGAAAGGGGCCGAGCAGTACCCGGGGTGGAG
GCAGGATATGATCGTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCT
CCGGCGGCGGGGTGCTGCCGGACATCAACGAGCCACAGACCGCCCTTCTC
GAGCAGGGGTTTTCGTATGCAGCAATCCGCAAGACGTATCTGGCGTGGAA
TTTCCTCTCTGCCGCCTCGACTAGTGAGACGGACAAAGCTATCCTCCGTC
GTTGCACGAACCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTG
CAGGAGACACAGGGTGCACAGCAGCAGCTTTTCAGAGAGCTCCGGCAGTA
CCAGACTCCTCGGAAGGAGAACCCCGTCGCCAGTTTGAACAAGCTCATGG
GTATGGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCATGC
CAACTTCGCGGTGGTTGGCCGTAGGCCCTCAGCGCCGCTGATTTGCGGTG
GGGGGGCCGGACGAAGTCGCGCGGAGGTGGCGCGCAAGCACAGCATGGAC
AGAGGGGCCATGAAAGTCGCACAATTGACGGTGCGCACTCCATCTGCGGG
ATAGGAGGCGGTGGAAAGCAGGGACGGTAGAGTGACCGTTGGGCAGAATA
GCCGGAGACACCCTACCATGGATTGACCGCGCGACGGCGTGTGGGGGGTG
GGCGCCGCACTCGCTTGACGCGGGCGGTGTTTTCTCTAAGTTGATCACAG
GCACGGCAGAGTGGCCGTGCACGCCCTACCACGGTTGACACGCGCGACGG
CGCGTCGGGGGGTGGGTGCCGCATCACGCGTGAAGCGGGCGGCATTTTTC
GACCACAGCACGGACGGAGGGGCCGTGGCTGTCATGCCTTGCCGTTCGGA
GCCGGGGGGGTAGCACTTGAAGTCGCGCGGAGATGGCGCGCAACCCAGCA
CGGACGGACGGGCCGTGGCTGTTCTGCCTCGTCGTTGGAGCGGGGGGGGG
CAGCATGTTTTGTCGCGCGGAGGTGGCGCGCAACCATCAGCCGGAGGTGG
GCATTTNGAGGGGCCGTGGCTGTCCTGCCTTGCCGTTTGGAGCCGGGGGG
GTAGCACTTGAAGTCGCGCGGAGATGGCGCGCAACCCAGCACGGACGGAC
GGGCCGTGGCTGTTCTGCATCGTCGTTGGAGCGGGGGAGGGCAGCATGTT
TTGTCGTGCGGAGGTGGCGCGCAACCATCAGCCGGAGGTGGGCATTTGGG
GTGGGGCACAGCGATATGGCGGTGTCATCAAAGTCGCGTGGAGAGTCGCC
GCGCGCATTTCATAAGCCGGGAAGGGACGATGGAGATCGGGATCGGCAGG
ATCGACTTGTGGACGATCGAGGGCGCGCTTCATCTTCACGATTGGAACTG
GTGGAGTGGACGGGCAAGCTTGATAATTTTTTCTTGTGTTTTTCTTTTTT
CGACGCCAGTTTACGGGTGTCGGTGAAATCCGAATTTTTCAAGCGTTCTT
GATCTTGTTTCGTTTTTTTTTTTTCGTTTCTTTTGACGGTAATTTTTTTG
GTTGCCGAATCCAGTGGTAATTCTCACGTATACGTGTTGTCGTTATACAT
CGTGATGTACGCTTTGCGCTTCTTGACCATTTTTTTTGTTGTGTCGAGGG
CTCATATCGGTGACAGGTGTGTCGGTGATGGTAGCAAAGTGGGGGGGGAT
GAAAACGTGCACGTTGGTAGAATTTGCCACCATATTTGATGCGTAGTTCA
TGAAGGTTCAATCGCAAGTTGATGCATTCTTGGTTGAAGGAAGATCGAGG
TTTTTGACTGTTTGCAGATTGCGGGCCTTGTTTGAAGGAGGCTTGACGTT
TTGTTTCTGAAGATGGGTTTCGTGGAAAACCGGTTGTGTTTGATTTGTTC
TTCAGCAGAAACAGGATGTTTGTGGTTTTGATTTGGTGGTGGATCGCGCT
TGGTTGATCCCAAAAGAGGGAGAACGTACCTGTCTGATGAAGTTTTGATG
CGGAATGCAGTTAGGCAGGGAGGGCGTTGCCCGTACATGTGTGTGATACA
CGAATCAGTGTTGGTGCTGCACAAGGATCTTGTTTCATCATTCAAGAAGG
ATTTTGCCAGGAGCGTACCTCGTGGTTGGAGAATAGAGCGTTGCTTAGAA
AATCGTAATCCGCATGTTTGGTGTAAGTCGCTTTTGTTTTGATCTTGCAG
TACAGCCGTTGGAATCATAGATGACATGGACGGTTCGTTTGATTTTGTTT
GAGGCGTTGGACTTCGATGGGTTTTGATCCGGCGGCCGGGTTTCCCCTTG
GTTCTATTTTCTTCGTTGTGTTTCAGCTATTTTGTCATAGTTCCGACGCA
CGAGTGGTTTTTCGATGGTGAAAAGAACCAGGGAGGGTGTTCGTA back to topprotein sequence of EsuBft1178_8a-0001 >EsuBft1178_8 ID=EsuBft1178_8|Name=EsuBft1178_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=119bp
MIVQAGILDIGDVFSGGGVLPDINEPQTALLEQGFSYAAIRKTYLAWNFL
SAASTSETDKAILRRCTNPREALRQLDAAYLQETQGAQQQLFRELRQYQT
PRKENPVASLNKLMGMAXX back to topmRNA from alignment at Scaffold_68:103071..105773+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1178_8a-0001 ID=EsuBft1178_8a-0001|Name=EsuBft1178_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2703bp|location=Sequence derived from alignment at Scaffold_68:103071..105773+ (Ectocarpus subulatus male Bft15b)
GTAAACCCACCATAGCCCAAGAAAGGGGCCGAGCAGTACCCGGGGTGGAG
GCAGGATATGATCGTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCT
CCGGCGGCGGGGTGCTGCCGGACATCAACGAGCCACAGACCGCCCTTCTC
GAGCAGGGGTTTTCGTATGCAGCAATCCGCAAGACGTATCTGGCGTGGAA
TTTCCTCTCTGCCGCCTCGACTAGTGAGACGGACAAAGCTATCCTCCGTC
GTTGCACGAACCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTG
CAGGAGACACAGGGTGCACAGCAGCAGCTTTTCAGAGAGCTCCGGCAGTA
CCAGACTCCTCGGAAGGAGAACCCCGTCGCCAGTTTGAACAAGCTCATGG
GTATGGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCATGC
CAACTTCGCGGTGGTGAGTTTCGAAGAGCAGTACGACCGCGCGGAAGAAC
TGTGCAACATGGATCCTAGTTGGGAGAAGCTGGCCGAAGACGAGAAGGAA
GCAAAGGTGCAGGAAGTGATAACTGAAAGTTTCTAGGGTGGACAGGTGGT
GTTGCTAATACGGTACGGCAGGTTGGCCGTAGGCCCTCAGCGCCGCTGAT
TTGCGGTGGGGGGGCCGGACGAAGTCGCGCGGAGGTGGCGCGCAAGCACA
GCATGGACAGAGGGGCCATGAAAGTCGCACAATTGACGGTGCGCACTCCA
TCTGCGGGATAGGAGGCGGTGGAAAGCAGGGACGGTAGAGTGACCGTTGG
GCAGAATAGCCGGAGACACCCTACCATGGATTGACCGCGCGACGGCGTGT
GGGGGGTGGGCGCCGCACTCGCTTGACGCGGGCGGTGTTTTCTCTAAGTT
GATCACAGGCACGGCAGAGTGGCCGTGCACGCCCTACCACGGTTGACACG
CGCGACGGCGCGTCGGGGGGTGGGTGCCGCATCACGCGTGAAGCGGGCGG
CATTTTTCGACCACAGCACGGACGGAGGGGCCGTGGCTGTCATGCCTTGC
CGTTCGGAGCCGGGGGGGTAGCACTTGAAGTCGCGCGGAGATGGCGCGCA
ACCCAGCACGGACGGACGGGCCGTGGCTGTTCTGCCTCGTCGTTGGAGCG
GGGGGGGGCAGCATGTTTTGTCGCGCGGAGGTGGCGCGCAACCATCAGCC
GGAGGTGGGCATTTNGAGGGGCCGTGGCTGTCCTGCCTTGCCGTTTGGAG
CCGGGGGGGTAGCACTTGAAGTCGCGCGGAGATGGCGCGCAACCCAGCAC
GGACGGACGGGCCGTGGCTGTTCTGCATCGTCGTTGGAGCGGGGGAGGGC
AGCATGTTTTGTCGTGCGGAGGTGGCGCGCAACCATCAGCCGGAGGTGGG
CATTTGGGGTGGGGCACAGCGATATGGCGGTGTCATCAAAGTCGCGTGGA
GAGTCGCCGCGCGCATTTCATAAGCCGGGAAGGGACGATGGAGATCGGGA
TCGGCAGGATCGACTTGTGGACGATCGAGGGCGCGCTTCATCTTCACGAT
TGGAACTGGTGGAGTGGACGGGCAAGCTTGATAATTTTTTCTTGTGTTTT
TCTTTTTTCGACGCCAGTTTACGGGTGTCGGTGAAATCCGAATTTTTCAA
GCGTTCTTGATCTTGTTTCGTTTTTTTTTTTTCGTTTCTTTTGACGGTAA
TTTTTTTGGTTGCCGAATCCAGTGGTAATTCTCACGTATACGTGTTGTCG
TTATACATCGTGATGTACGCTTTGCGCTTCTTGACCATTTTTTTTGTTGT
GTCGAGGGCTCATATCGGTGACAGGTGTGTCGGTGATGGTAGCAAAGTGG
GGGGGGATGAAAACGTGCACGTTGGTAGAATTTGCCACCATATTTGATGC
GTAGTTCATGAAGGTTCAATCGCAAGTTGATGCATTCTTGGTTGAAGGAA
GATCGAGGTTTTTGACTGTTTGCAGATTGCGGGCCTTGTTTGAAGGAGGC
TTGACGTTTTGTTTCTGAAGATGGGTTTCGTGGAAAACCGGTTGTGTTTG
ATTTGTTCTTCAGCAGAAACAGGATGTTTGTGGTTTTGATTTGGTGGTGG
ATCGCGCTTGGTTGATCCCAAAAGAGGGAGAACGTACCTGTCTGATGAAG
TTTTGATGCGGAATGCAGTTAGGCAGGGAGGGCGTTGCCCGTACATGTGT
GTGATACACGAATCAGTGTTGGTGCTGCACAAGGATCTTGTTTCATCATT
CAAGAAGGATTTTGCCAGGAGCGTACCTCGTGGTTGGAGAATAGAGCGTT
GCTTAGAAAATCGTAATCCGCATGTTTGGTGTAAGTCGCTTTTGTTTTGA
TCTTGCAGTACAGCCGTTGGAATCATAGATGACATGGACGGTTCGTTTGA
TTTTGTTTGAGGCGTTGGACTTCGATGGGTTTTGATCCGGCGGCCGGGTT
TCCCCTTGGTTCTATTTTCTTCGTTGTGTTTCAGCTATTTTGTCATAGTT
CCGACGCACGAGTGGTTTTTCGATGGTGAAAAGAACCAGGGAGGGTGTTC
GTA back to topCoding sequence (CDS) from alignment at Scaffold_68:103071..105773+ >EsuBft1178_8a-0001 ID=EsuBft1178_8a-0001|Name=EsuBft1178_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=357bp|location=Sequence derived from alignment at Scaffold_68:103071..105773+ (Ectocarpus subulatus male Bft15b)
ATGATCGTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGG
CGGGGTGCTGCCGGACATCAACGAGCCACAGACCGCCCTTCTCGAGCAGG
GGTTTTCGTATGCAGCAATCCGCAAGACGTATCTGGCGTGGAATTTCCTC
TCTGCCGCCTCGACTAGTGAGACGGACAAAGCTATCCTCCGTCGTTGCAC
GAACCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTGCAGGAGA
CACAGGGTGCACAGCAGCAGCTTTTCAGAGAGCTCCGGCAGTACCAGACT
CCTCGGAAGGAGAACCCCGTCGCCAGTTTGAACAAGCTCATGGGTATGGC
CAANNNN back to top
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