EsuBft1167_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1167_7a-0001
Unique NameEsuBft1167_7a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_370contigScaffold_370:264843..269662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G8C4
ProteomeIdEsuBft1167_7
Ownerapollo_admin@sb-roscoff.fr
Nb exon6
Max annot lvl2759|Eukaryota
Length138
Hectar predicted targeting categoryother localisation
Evalue6.59e-171
EggNOG OGsKOG0039@1|root,KOG0039@2759|Eukaryota
Ec32 ortholog descriptionputative respiratory burst oxidase homolog
Ec32 orthologEc-19_003950.1
Date last modified2016-06-13
Date creation2016-06-13
Descriptionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
COG categoryC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7aEsuBft1167_7aEctocarpus subulatus male Bft15bgeneScaffold_370 264843..269662 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7a-0001EsuBft1167_7Ectocarpus subulatus male Bft15bpolypeptideScaffold_370 265202..269632 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7a-0001-exonagat-exon-69139Ectocarpus subulatus male Bft15bexonScaffold_370 264843..265267 -
EsuBft1167_7a-0001-exonagat-exon-69136Ectocarpus subulatus male Bft15bexonScaffold_370 266342..266518 -
EsuBft1167_7a-0001-exonEsuBft1167_7a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_370 267070..267165 -
EsuBft1167_7a-0001-exonagat-exon-69138Ectocarpus subulatus male Bft15bexonScaffold_370 267541..267921 -
EsuBft1167_7a-0001-exonagat-exon-69135Ectocarpus subulatus male Bft15bexonScaffold_370 268603..268830 -
EsuBft1167_7a-0001-exonagat-exon-69137Ectocarpus subulatus male Bft15bexonScaffold_370 269585..269662 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7a-0001-exonagat-three_prime_utr-1607Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_370 264843..265201 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7a-0001-cdsEsuBft1167_7a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_370 265202..265267 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1167_7a-0001-exonagat-five_prime_utr-1047Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_370 269633..269662 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1167_7a-0001 ID=EsuBft1167_7a-0001|Name=EsuBft1167_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1385bp|location=Sequence derived from alignment at Scaffold_370:264843..269662- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
AGGCTATCGAAGAAGAAGAACGTGCACCTCATGTGGCTATCCCGGGAGGC
CGGCATGGTCGCGACGTTCGAGAAGCAGCTTCGCCGCGTGAAGAGCACCG
TGCACCTGACCGGCAAGCCCACCGACAAGACCAAGCAGCGCCTCACCGAC
CTCCTCGCCCATTCCAGCGCGCCTCCTCCCGTCGGAACCGGTTCCTCCTG
CTCGGACCCGACCGACTTGGAGGCCGGCTTCGCGGCGGCGAGGTCACGGA
ACGACGACTTCGACGACGGCGCGTACGGTGCCGGGGGTGAGATGGAAGAC
CTCGGGGGCTGTTCGTCCAATCGTCGAAACCGCTCTTCCGCCGCCGGTGG
CATAAGCGGCAACAGAAGCAGCAGCAGCAGCGGCGGCGGCGGCAAGCGAT
TGCGAAGAACACCCTTCGGAAATCCTATCTCTCTCAACTTCGGGAGGCCC
GACATCGAGAAATTCCTTACGGAGATCATTCATGGCTCTTCAACATCTTC
ATCGCAGCTCGAGGAGTGGGCCGCAACCGGTGGCCCGCCTGGAAAAATCG
TCGGCTCCGCCGCGGTAGGAGACTCATGGCAGCCGCAGCAGAGCTCGTCC
AAACCGCGGGCATCGCCACCTCCGTCGACAGGGAGGCATGCCGAGAGCGA
GCGGGAGTACTCAGAGACCTCGTCAAGGGTGCGGACGGATGTAAGAAAGA
AGGTGCTGGCCAGGCTTAACACAAACCAGCGGATCTCCAAGAGGGACCTT
ATGAGCGCCGACCTGTCGGTGGTCCCTGGAAAGGCCTCCCCGCCGGGTGT
TCCGCGGTCCGGCCGAGTTACCGCAGCGGCGTCCGACATGGGAAGCCCCG
ACGGTGTCAGCGGCGGCGTTGGCGGCGGGGGCGGCGGTGCCTCCGGCGCC
GCTTGGGACCCGCGCACGTGGCTTGTCCTGTACTGCGGAGCGAACGCCAA
GGTCGAGAAGGCGGTAGAAACTGCCTGCGACGACCTTGGCGTTACCTGGA
GGAAGGAGTACTTCAGCGCTTGGTGATTCCCTCCCTCCTGACGCTGTTCT
TGCCGCACACGATGGATCATGTTGGCGTCTTCGAGGCCCCCTTAATAGTA
GTCGCCTAGTCTTCCGGTGCACTCATATAACGCCACGTTTCTTGCCGAGT
GCGTGTTTTTGTTGGCAACTTTTGAGAGTGAACACCCGTCTACAGTACAA
TATTTTATTGTCGCTTTGTCTTTTTCTTGGTGCACTGTTGGGGTGCATGT
AGCACGCCTCTGGCTGTTTGTCGGTGAAGTGCTTGTTTTTGTGTCGTTGG
CGGTGGCTGACTCGCGCGTCGTGCTGTTGGGGGGAACCCCGTGTTTTTGT
TCGTTGGTGCTTGAGGAGGGGGTGTACTCATACTC
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protein sequence of EsuBft1167_7a-0001

>EsuBft1167_7 ID=EsuBft1167_7|Name=EsuBft1167_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=331bp
MWLSREAGMVATFEKQLRRVKSTVHLTGKPTDKTKQRLTDLLAHSSAPPP
VGTGSSCSDPTDLEAGFAAARSRNDDFDDGAYGAGGEMEDLGGCSSNRRN
RSSAAGGISGNRSSSSSGGGGKRLRRTPFGNPISLNFGRPDIEKFLTEII
HGSSTSSSQLEEWAATGGPPGKIVGSAAVGDSWQPQQSSSKPRASPPPST
GRHAESEREYSETSSRVRTDVRKKVLARLNTNQRISKRDLMSADLSVVPG
KASPPGVPRSGRVTAAASDMGSPDGVSGGVGGGGGGASGAAWDPRTWLVL
YCGANAKVEKAVETACDDLGVTWRKEYFSAW
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mRNA from alignment at Scaffold_370:264843..269662-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1167_7a-0001 ID=EsuBft1167_7a-0001|Name=EsuBft1167_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4820bp|location=Sequence derived from alignment at Scaffold_370:264843..269662- (Ectocarpus subulatus male Bft15b)
AGGCTATCGAAGAAGAAGAACGTGCACCTCATGTGGCTATCCCGGGAGGC
CGGCATGGTCGCGACGTTCGAGAAGCAGGTGCGTGCGTGCGCGCGGCACA
GCACAGCGTGCATCGATGCGCAAACAAGCGAAGAGTTAGGGCTGCTGCTG
CTGCTACTGCTGCTGCTGCTGTCGCGCCCTCACCTCCGCAAGTGTTGCGT
TGACGGTGTTCCGCAGGAGGTTCTTGCTCGGTAGCCGTTGTTCAGGCCGC
TTCCCAGCCACTGGTTCTTCGATTCAATACTCAACTAGGTTTTTGTGACA
TTGTTTGGTCCGGTACTGTAGCGGCATACGTGTCAAGTGTTTTTCTGCCC
AAAGTGGCAGACGGTAGGCCTCGTTTCAGGGATAATACCCCCGACGCGCT
CGACTCAGTAGTCTACACGTCCACACAGGGTTATCGAAGCAAACATACTG
GACAACGTAAAGAATCGGCTATGTTGGGGCTAGGGCCTGCGTGCCCCCTA
CCTGACCGTACTAAGCTTACGTTGGCACTTTCACTTGACTTCACTCCGAC
CCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCCCCCCCCCCCCCTATCCCTTACAGCTTCGCCGCGTGAAGAGC
ACCGTGCACCTGACCGGCAAGCCCACCGACAAGACCAAGCAGCGCCTCAC
CGACCTCCTCGCCCATTCCAGCGCGCCTCCTCCCGTCGGAACCGGTTCCT
CCTGCTCGGACCCGACCGACTTGGAGGCCGGCTTCGCGGCGGCGAGGTCA
CGGAACGACGACTTCGACGACGGCGCGTACGGTGCCGGGGGTGAGATGGA
AGACCTCGGGGTGAGTAGCGCGGACCTGGAGTGGCCCGACAACGGAATCT
CGACAGGTGGCCGACCGCGCGGAATGATATTGGCGGGGGGGAGGGATGCT
GTGTTTTTTTTTTGTGTGTTTTTTTTCTCGCGAGCACGGCTTGGCCGCGT
GCTGCGCCGCTGCATCTTGACGTCTTGCTCTTGGCGCCCTACGAGAAATA
GCCTGGAGAAGCGCTTTTCCGTAAACGCTATGGGTGTCGTCACCTTTTCC
CTTTTCGGCGATCGTCTCGAGCTTGGGGTTCCATTCCAATCCTTATCGTG
GGACAGCCTGTTCCGTCAACAAAGAGAGAGAGAGCAGCGCCTTTTTCTTC
GAAGGGTAAAGCAAGAACGCTGGGCTCGAAAAGCCGTCGGCAAGCTCGTC
GCGATGAACGCTTAGATGGGCGATGAGGCGTGCGGAGGGGTGCTATCTGC
TTGGCCGCTGACTTGTACCTCCCAGACGGAGCACCGATTTGTTTGTATTG
TTGCCCCCTAGCTGAAGATAGGCAGGCGATTAATTGTTCAGTGTACAGTA
CCGTCGAGGACGAAAGAACATTGAGAGTACAGCAAGCATTCAGAGGACGA
AAGTTAGTCGAGGACAAAGAATGACCTTCGTTCGCGTGACACCGGCTCTT
CCGGTTACGTGTGCTCGGTGTTCCCCTCCGGCTCCGCGCAGGGCTGTTCG
TCCAATCGTCGAAACCGCTCTTCCGCCGCCGGTGGCATAAGCGGCAACAG
AAGCAGCAGCAGCAGCGGCGGCGGCGGCAAGCGATTGCGAAGAACACCCT
TCGGAAATCCTATCTCTCTCAACTTCGGGAGGCCCGACATCGAGAAATTC
CTTACGGAGATCATTCATGGCTCTTCAACATCTTCATCGCAGCTCGAGGA
GTGGGCCGCAACCGGTGGCCCGCCTGGAAAAATCGTCGGCTCCGCCGCGG
TAGGAGACTCATGGCAGCCGCAGCAGAGCTCGTCCAAACCGCGGGCATCG
CCACCTCCGTCGACAGGGAGGCATGCCGAGAGCGAGCGGGAGTACTCAGA
GACCTCGTCAAGGGTGCGGACGGTGCGTGCATCATATCTTCTGGCAGAGG
CTCGTCGGGACTTACGGTTTGCGCTCTTCAGGGCTGCGAATCGTTCGTGT
GCTTTTCTTCTTGCGTGTGTGTTGGGCAGGCTAGCTGGGTCTTTCTAATC
GCGCTGCCCAGGCTTCTCTCGGCAAGAGTGTGAACTCGGGACGGCGTGCA
TGCGTGGTTCCAAAAAAACACGCGACACATAGCCACAACCGCGAAAGACA
TATTCCCTACCCCTTCGTGTGTTGTTCTCGTGCCCATTCGGATGAAGGAT
GTATGAAATGTTGTACAACCTGACCAGTCGTAGCACTTGCCCAATCTGCC
CCCCCAATCGTTCGTGCGTGTTTGGTCGCGACCTTATTCGGCTGCAGGAT
GTAAGAAAGAAGGTGCTGGCCAGGCTTAACACAAACCAGCGGATCTCCAA
GAGGGACCTTATGAGCGCCGACCTGTCGGTGGTCCCTGGAAAGGTGAAGG
TTTGTCGTGCTTGCCCCCAACGAACTCGTCACCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNCCCCCCCCCCCCCCCC
CCTCTTCCCGTGGTTGGTTCTCGGGGCGCTGGCACGCGGCCCATATCTTC
ACGTTGTATGGAAACCCGTTCCTGATTCGTCTGCAGAGTATGGAATACAA
CGGCCGGAAATCGATGCTTTGGCTGGTTCGAATACCCGATAGAGAGCGAC
AACGATCTATGCACGTGTAGTTTGGGTGCGCCGTCCTCACCAACGGTGTT
CCCAGGGTCCTCTACGCGATCATGATCGGCCGGGTGCGTCTGCCTACCGA
ATTGCTCTCCTAGCCCTGCGGTGCCCTTGGTGTTACACATCGGTTTCACG
TGTTGCATCTCCATCTCTGTAAATGAACGCGTTCCCCGTGGTATGAAAAT
CGGTTTCACGTACGTACGTGCAGTGTGTGTACCTCTCTAGAGAGAGTTTC
AGATCCGCGTTTTTCGTTTACGTCGTGCCGCCCCTCGCAAGAAGGCCTCC
CCGCCGGGTGTTCCGCGGTCCGGCCGAGTTACCGCAGCGGCGTCCGACAT
GGGAAGCCCCGACGGTGTCAGCGGCGGCGTTGGCGGCGGGGGCGGCGGTG
CCTCCGGCGCCGCTTGGGACCCGCGCACGTGGCTTGTCCTGTACTGCGGA
GCGAACGCCAAGGTCGAGAAGGTAAGGCCAACCTCCGCGACAGTAAGTAG
CCTCCATGGGGTTGTTGGGCTTTGTAGGGGTTACGATTGGAAAGGGGTAG
GTAATGGTTTCAACCCCCCCCCCTCGCTGTTTATTTCACATGTAGTCGAC
TTGATGTCAGGGGGTCTCCGGAGCGTGGGATTAAGGCCGGGTCTCCCTCT
GAGCCTTGTTTTTTTTTACGAAAATATGTTCGTACCCAATCTGAAAGCCT
AGGGGTATGTAAGAAACGCGATGCTCGGCGGCGGACAGCTTTAACGCCGC
GGGGTGTGTGTGGTTCCATGGGGAAGTTGATGAGCTATTCGGAGGAGGGC
CAGCAGATCGATACGGGCTACGCTCATTAATGTTCCCTCCATCCTCTCGA
TAGCAAGTACCAACCACTACCTTCGGTACAATTTGCTTATAGGGTCATCC
TTGCCTCGTCCATCGAGATTGCCTGGGGTCTTGGGCATGACACACAGTGC
TCTTGCCCCGGCGCGGGGCCTCTACCTGCCGTTTACTCTGCTCGCCATGG
CTCGACTTGTTCATGTCTCTGGTCGAATCGTCCAATCGCGAGTGGCCTGA
GACGTGGGCCCTCCGTGAGAGTTGCAGATTTACTTCACGAGGGCCGCCTC
CTTTTGACGTGTTCTCTATCCACGAGGTCTGGTGTTCCGCCGCAGATCTC
TGGTGGTGGCGACAACAGAGCTGCGTTCTCTCATGAACGGGAAACCCGTG
CCGTTTGATGAGAGGTGTGTGGGGCGATGCCACAAAGGGCTCTCAGGCAC
ATGCAGCGGGGAGTCCGTCGGTTGAGGCTCTGCTGAATGGGAATGGAGTC
AAAAATGACGACGCACGGGGAAACATGCGCGGCCATTGCGTCCAAAGCGC
ATCTACTCTCTCTCGTTGTCCGCGATACCATGTGGCAGCAAGGTGCATTT
CCTACATGCAAGTAGTTCTTCCACCATTCACTACGGATTATGCGGTACAG
AGTGTCTCGCCCCCCTTTTCTCACAAGCCGCGTGCCCTCCTCCCGTGTCG
GTTCCTGCGCATGGGACCGCCTGCTGGCCGTGCTCGTGTGCACAGGCGGT
AGAAACTGCCTGCGACGACCTTGGCGTTACCTGGAGGAAGGAGTACTTCA
GCGCTTGGTGATTCCCTCCCTCCTGACGCTGTTCTTGCCGCACACGATGG
ATCATGTTGGCGTCTTCGAGGCCCCCTTAATAGTAGTCGCCTAGTCTTCC
GGTGCACTCATATAACGCCACGTTTCTTGCCGAGTGCGTGTTTTTGTTGG
CAACTTTTGAGAGTGAACACCCGTCTACAGTACAATATTTTATTGTCGCT
TTGTCTTTTTCTTGGTGCACTGTTGGGGTGCATGTAGCACGCCTCTGGCT
GTTTGTCGGTGAAGTGCTTGTTTTTGTGTCGTTGGCGGTGGCTGACTCGC
GCGTCGTGCTGTTGGGGGGAACCCCGTGTTTTTGTTCGTTGGTGCTTGAG
GAGGGGGTGTACTCATACTC
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Coding sequence (CDS) from alignment at Scaffold_370:264843..269662-

>EsuBft1167_7a-0001 ID=EsuBft1167_7a-0001|Name=EsuBft1167_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=996bp|location=Sequence derived from alignment at Scaffold_370:264843..269662- (Ectocarpus subulatus male Bft15b)
ATGTGGCTATCCCGGGAGGCCGGCATGGTCGCGACGTTCGAGAAGCAGCT
TCGCCGCGTGAAGAGCACCGTGCACCTGACCGGCAAGCCCACCGACAAGA
CCAAGCAGCGCCTCACCGACCTCCTCGCCCATTCCAGCGCGCCTCCTCCC
GTCGGAACCGGTTCCTCCTGCTCGGACCCGACCGACTTGGAGGCCGGCTT
CGCGGCGGCGAGGTCACGGAACGACGACTTCGACGACGGCGCGTACGGTG
CCGGGGGTGAGATGGAAGACCTCGGGGGCTGTTCGTCCAATCGTCGAAAC
CGCTCTTCCGCCGCCGGTGGCATAAGCGGCAACAGAAGCAGCAGCAGCAG
CGGCGGCGGCGGCAAGCGATTGCGAAGAACACCCTTCGGAAATCCTATCT
CTCTCAACTTCGGGAGGCCCGACATCGAGAAATTCCTTACGGAGATCATT
CATGGCTCTTCAACATCTTCATCGCAGCTCGAGGAGTGGGCCGCAACCGG
TGGCCCGCCTGGAAAAATCGTCGGCTCCGCCGCGGTAGGAGACTCATGGC
AGCCGCAGCAGAGCTCGTCCAAACCGCGGGCATCGCCACCTCCGTCGACA
GGGAGGCATGCCGAGAGCGAGCGGGAGTACTCAGAGACCTCGTCAAGGGT
GCGGACGGATGTAAGAAAGAAGGTGCTGGCCAGGCTTAACACAAACCAGC
GGATCTCCAAGAGGGACCTTATGAGCGCCGACCTGTCGGTGGTCCCTGGA
AAGGCCTCCCCGCCGGGTGTTCCGCGGTCCGGCCGAGTTACCGCAGCGGC
GTCCGACATGGGAAGCCCCGACGGTGTCAGCGGCGGCGTTGGCGGCGGGG
GCGGCGGTGCCTCCGGCGCCGCTTGGGACCCGCGCACGTGGCTTGTCCTG
TACTGCGGAGCGAACGCCAAGGTCGAGAAGGCGGTAGAAACTGCCTGCGA
CGACCTTGGCGTTACCTGGAGGAAGGAGTACTTCAGCGCTTGGTGA
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