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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FGW5 |
| ProteomeId | EsuBft1154_5 |
| Protein domains | IPR000719 |
| Protein domains | G3DSA |
| Protein domains | IPR017441 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 9 |
| Max annot lvl | 2759|Eukaryota |
| Length | 136 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.63e-203 |
| EggNOG OGs | KOG0613@1|root,KOG0613@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K06491 |
| KEGG Pathway | ko04514,ko05020,map04514,map05020 |
| Description | cytoskeletal protein binding |
| COG category | S |
| BRITE | ko00000,ko00001,ko00536,ko00537,ko04090,ko04131,ko04516 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0005524 |
| GO | 0006468 |
| GO | 0004672 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1154_5a-0001 ID=EsuBft1154_5a-0001|Name=EsuBft1154_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1369bp|location=Sequence derived from alignment at Scaffold_106:288751..292675- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCCAACGAGGGAGCACCTTCGCATGGGTGGGATTCCAACGGCTGCGGGCA
TTCACGCAATGACAGCCTAACGGTGACCGAGGATCAACTGGTGGCGGTGC
GTCATGAGCAGAAGCACCGACAGCAACTGGGTGAAGAAGTGCCGCATGGC
TATGCTCATGTCCGGGATCTATGACCGCAGGACCTCCGAGGAGCGGCGCC
TGAGGCACCTCGTTGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGC
GTTCTGCAGGGAGAGGAGGCACGCCCCGTGGTTGCTACTATGAAAGGCCT
GGCTGACCAGCTTGCGACGGTCGGGCCGGAACCTTTGTCGGTTATCGACG
ATGCTAATAACCAGATGTTCGACCTGAAGGCTCAGGAGTCAAACCTCCAA
CACGTACTCCTAGGGCGCAATCGTGACCTCGAAGCGCAAGTAGCACAAGA
AAAAGACCAGAACTGGTCTCTGGGGGGAAGGGCAGGTGCTTCTCTGGAAC
TTCAGAAATCCCACCTTCTGCAGCGCATCAAGGTGCACAACAAGTTCATG
GTGGACTTGCTGGGCTTCATGGACAAGAAGAAGGCGGTGGTGAGGCGCGC
CGTACTTCGCTTGGAGGCTGCTCTAGCGACGTGCGATGCACGGGATAAGG
TTATTTCGGCTGCAGACGAGAGAGTGGCCAAGGACATATTAGAGCTAGTA
GATCGCGCGCAGAACAAGCCGCAAGGGTCGGTGATAGTGACTACCTGCCC
CATGCCCTTGGCAATGGAACCGCTGCTCGTCCAGGAACCAGTCGCAGCTC
CGGTGGAACCCCCCGCTAACTCCGTCACCACGGCGCTCAACAAGTGGGTC
GAAGGAAGCTTCTTCAAACGGTTCGTGGCGCGCACCATGGCAAGGAACAA
CGTGGACGCCACCTTCTTGGCTACACGAGCTCTGTCGCCGGTGGATACGT
GGTACGTGCTATCCACTTGCCTGGGACGAGGAACTTTCGGTGGCGTCTTC
AAGATAGACGTCCTCACCCTGGGGGAGAGCTTCGCCATGAAGCTAATCAA
TGAGGGAGAGGGCAAGAATGCTCGAAGGCGAACGCGCAGGTCGCAAGAGT
CCCTGCTCGGGGAGATGGTCATCTGTGTCTGGCACGGCTCGCAACCACTA
TCGGATGATTTGTGTGATTCCTCCCATACCGGCCTGATGTTTTCGTCCTT
GGCTGTCAATGTCCCGCCACACCCGAACGTCCTCCAAGCCGTGGGAGTAG
ATGACAGGGAGCTAGACTGCATGAAGATCGTCTACCACCTTGCAGAGGGG
GATTTCAGCCGCTGCGCGTGGGGAAGCACAGAAGACAGCGCGGGGACGAA
GATGCGGGAACATCCATGA back to topprotein sequence of EsuBft1154_5a-0001 >EsuBft1154_5 ID=EsuBft1154_5|Name=EsuBft1154_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=421bp
MSRSTDSNWVKKCRMAMLMSGIYDRRTSEERRLRHLVGLAIDLNTAEASV
LQGEEARPVVATMKGLADQLATVGPEPLSVIDDANNQMFDLKAQESNLQH
VLLGRNRDLEAQVAQEKDQNWSLGGRAGASLELQKSHLLQRIKVHNKFMV
DLLGFMDKKKAVVRRAVLRLEAALATCDARDKVISAADERVAKDILELVD
RAQNKPQGSVIVTTCPMPLAMEPLLVQEPVAAPVEPPANSVTTALNKWVE
GSFFKRFVARTMARNNVDATFLATRALSPVDTWYVLSTCLGRGTFGGVFK
IDVLTLGESFAMKLINEGEGKNARRRTRRSQESLLGEMVICVWHGSQPLS
DDLCDSSHTGLMFSSLAVNVPPHPNVLQAVGVDDRELDCMKIVYHLAEGD
FSRCAWGSTEDSAGTKMREHP back to topmRNA from alignment at Scaffold_106:288751..292675- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1154_5a-0001 ID=EsuBft1154_5a-0001|Name=EsuBft1154_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3925bp|location=Sequence derived from alignment at Scaffold_106:288751..292675- (Ectocarpus subulatus male Bft15b)
GCCAACGAGGGAGCACCTTCGCATGGGTGGGATTCCAACGGCTGCGGGCA
TTCACGCAATGACAGCCTAACGGTGAGCTTCAGAGCGAAATGGGTGAACT
ATCTATCCTCCTACGTTGGTCTACATGTGAACAATCCTCCACGGACTGAC
CTCCAAAACCCAACCATGCTGAGACTCTCGTAGTCTAGTCTACAGACAGA
CAATCGAAGCGACGAACCTGTTGATGACCACGGCTACGCTTCACCTACCC
ACCCCGCCCCTGCGACAATGTATGACCACCTCAGCCGTGGGTAGATATTT
CACGCGTGTTAGCCCTGGTTGTTTCTGTGGTGTGACTGCTGTTGCCGAGG
GAGGGTTTCCGAGCCTGTGCTGTATAGGCTAGCTGCTGCGGATGTATTGA
CTATGTCAGCTATTTAGCTGTATGGACGTACATGCATGTGGCCTACGTAT
ATGTCATGTACCAAAGAAACACCAGTTGGCCTCCTGCCTGAGAGCAGCAC
ATGACTACGGGTAACCCCCACATGGACCCTCGACATTGAATTGCGTTTGG
TACGGAGTTGCGAGCAGGAATTGCCGTGTTGACGGGCCGAGTGATGCAGC
ATTTCGTGTCACGTTAAATTATCAACATCACGGGTGGGTGACGGCAATTA
AAATCCAACACACCTGCCGTGAGTAGTATTTCTATCTCTCGAAACCGGTC
TCCCTGGCGGGGCGCGCAGGAGAGACACGCCACAGAGATCGGTAAGGTAC
ATTGAGGCCGCCCTCTCGCTGTCCGGTAGTGGTCGGACGTGTATTGTTCT
GACTGCGTAGATAATTGACAACCGTATTTTCGTCCCCTTACCCATAGGTG
ACCGAGGATCAACTGGTGGCGGTGCGTCATGAGCAGAAGCACCGACAGCA
ACTGGGTGAAGAAGTGCCGCATGGCTATGCTCATGTCCGGGATCTATGAC
CGCAGGGTAGGCGTTTGCGGTCTGATCGCCGAGTGTTGGTTGGGGCGGAG
TGAAAGTGACGGGGTGGTCACAGACAAGCAGCTTATGTACCCTCGCTGTC
AATATTGTACACTACCCTCGGTGTGACAAGAGTGCTGTGCGATGAAAGGG
ACAGAGTACTGTTCGCGTGCTCGCTCGACGGCGTCATTTGACGTGTGCCG
TTCATGTGCTTGTTGCGTCAGACCTCCGAGGAGCGGCGCCTGAGGCACCT
CGTTGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGCGTTCTGCAGG
GAGAGGAGGTGGGTGCTGCACGCGGTTTTTCAGCCTCGAAGACCGAGGAT
ACAATTGAACAACGAGAAACACGCAGCAGCCCCATGTTTTCTCGAATCTG
CTGCCGCTGTCTTCAGCGAAGCGGCCATCGTCCGCATACAGGCATTTCGT
TCGCCCTGTTAGCACCCTTGACCTATCCAACACAACCACTCGCTAGCTCC
AAGTCACGTCTCTACCGTCACGTGGCCGTGCTCAACATGAGTGCGGTCGT
AACGGACTACACCAGACCCTCGCACACCACTGCATCAATACTATCCGTGC
ACCACTTATTGCATGCCTACCGCCCGCCGTGGGGTTGACAATCCCCAACC
ACACCCCGCCACACTGCTCGCCGGGTCCCGTTGACCAGGCACGCCCCGTG
GTTGCTACTATGAAAGGCCTGGCTGACCAGCTTGCGACGGTCGGGCCGGA
ACCTTTGTCGGTTATCGACGATGCTAATAACCAGATGTTCGACCTGAAGG
CTCAGGAGTCAAACCTCCAACACGTACTCCTAGGGCGCAATCGTGACCTC
GAAGCGCAAGTAGCACAAGAAAAAGACCAGAACTGGTCTCTGGGGGGAAG
GGCAGGTGCTTCTCTGGAACTTCAGAAATCCCACCTTCTGCAGCGCATCA
AGGTGCACAACAAGTTCATGGTGGACTTGCTGGGCTTCATGGACAAGAAG
AAGGCGGTGGTGAGGCGCGCCGTACTTCGCTTGGAGGCTGCTCTAGCGAC
GTGCGATGTGAGTGTCTACCAAGGCAGTAGAAAGCAGGATAGCGTTACCA
GTCTCTCGCTTCTCCCAACGGGGCTCTGAAAAAGAGTACGTGCGGCACCA
CATCGGGAGCCATCCTCGTTAGTAGGGAATGGCTCTTCTCGGGCCATCCG
AACACCTATGCCCTACCCCCACTGTAATGAAATTTCCCAAAACAAGCACC
CGGCGACGTCACTCTCCCCTCACATTCAACGGCAGTGAAAAATTCCACTT
TTTGACTGGAAACAGGCACGGGATAAGGTTATTTCGGCTGCAGACGAGAG
AGTGGCCAAGGACATATTAGAGCTAGTAGATCGCGCGCAGAACAAGGTGA
GGGTACTACACTCGGGAAAAGTAGGTTCGGCAGAAAGGTTCCCTGTGTAA
CAATGGTGTTGCTGCCTCACACGCACAGAGATTGCACGAGATTCAACACC
CTGTGTGATTTTCGGCAATAGTGTCAACAAGATGGGGCTTCTTGTAACCT
GTTTTTGCTCATTTGGCGTCTCGCGGTATCCCTCGCGCGTTCGACAGTGT
TCGTCATCGTCGCCGCAAGCAACAACAGACTGCGCATGCGATGTTTCGAA
GCTTCAGCCGCAAGGGTCGGTGATAGTGACTACCTGCCCCATGCCCTTGG
CAATGGAACCGCTGCTCGTCCAGGAACCAGTCGCAGCTCCGGTGGAACCC
CCCGCTAACTCCGTCACCACGGCGCTCAACAAGTGGGTCGAAGGAAGCTT
CTTCAAACGGTTCGTGGCGCGCACCATGGCAAGGAACAACGTGGACGCCA
CCTTCTTGGCTACACGAGCTCTGTCGCCGGTGGATACGTGGTACGTGCTA
TCCACTTGCCTGGGACGAGGAACTTTCGGTGGCGTCTTCAAGATAGACGT
CCTCACCCTGGGGGAGAGCTTCGCCATGAAGCTAATCAATGAGGTAGGTG
TGATACCTCCGTGTTGGTGCACTGGTTGCTCTTGATGGTGATCATGTGTA
GCCATTGCAAAGCGTTCGATGAGCTGTCCCCTCCTTGTAGTTCTGCGTAA
TGTGATAGTTCAAGTGTACCTGGCCCCCTATCGGAGCTTCTTCGAACTGG
GCTTGGTACTGCTGCACCGTCCTGCTTGCTTTTGGCCCTCGTACCTCAGG
GAGAGGGCAAGAATGCTCGAAGGCGAACGCGCAGGTCGCAAGAGTCCCTG
CTCGGGGAGATGGTCATCTGTGTCTGGTGAGACACGCATGTCGCCGTCGT
TTTGTTTTTGCAGAGTAGCGAAGACTTGTCACAGTCAACGAATAGAGTGC
AGCAAGGGCGGGGTGGTTGCAAGCACGTAGAATTTGCGGTAGATGAACAC
CGTTATAGGGGTTTTGGTGTCTTGGGAGCAGGAGTGGTGGTTTTTCCACA
GGCATGTTCCATCCTTCGTTCCGGTTCGTGCACCAAGTACACCGATTTGT
AGGCACGGCTCGCAACCACGTACGTTGCATACCGCTTTCATTGTCGGTTC
CGCGCGTGTTTCGATCAACCCACATTGTTCGCGTCGATGCCCGCAGTATC
GGATGATTTGTGTGATTCCTCCCATACCGGCCTGATGTTTTCGTCCTTGG
CTGTCAATGTCCCGCCACACCCGAACGTCCTCCAAGCCGTGGGAGTAGAT
GACAGGGAGCTAGACTGCATGAAGATCGTCTACCACCTTGCAGAGGGGGA
TTTCAGCCGCTGCGCGTGGGGAAGCACAGAAGACAGCGCGGGGACGAAGA
TGCGGTGAGATGTGAACTCACGTCATCCCTCTCGACCCACCGGTACCACA
TGACTCGGTTGGAAAATATTGCCGTTGACTGACGGCCTACAACTTGTGAT
TTGTTTACCTTGTTGCAGAGATGAGTTGTGGAGTTTGTCTCTGTACTGTG
GCTTTGTCACAGGGAACATCCATGA back to topCoding sequence (CDS) from alignment at Scaffold_106:288751..292675- >EsuBft1154_5a-0001 ID=EsuBft1154_5a-0001|Name=EsuBft1154_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1266bp|location=Sequence derived from alignment at Scaffold_106:288751..292675- (Ectocarpus subulatus male Bft15b)
ATGAGCAGAAGCACCGACAGCAACTGGGTGAAGAAGTGCCGCATGGCTAT
GCTCATGTCCGGGATCTATGACCGCAGGACCTCCGAGGAGCGGCGCCTGA
GGCACCTCGTTGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGCGTT
CTGCAGGGAGAGGAGGCACGCCCCGTGGTTGCTACTATGAAAGGCCTGGC
TGACCAGCTTGCGACGGTCGGGCCGGAACCTTTGTCGGTTATCGACGATG
CTAATAACCAGATGTTCGACCTGAAGGCTCAGGAGTCAAACCTCCAACAC
GTACTCCTAGGGCGCAATCGTGACCTCGAAGCGCAAGTAGCACAAGAAAA
AGACCAGAACTGGTCTCTGGGGGGAAGGGCAGGTGCTTCTCTGGAACTTC
AGAAATCCCACCTTCTGCAGCGCATCAAGGTGCACAACAAGTTCATGGTG
GACTTGCTGGGCTTCATGGACAAGAAGAAGGCGGTGGTGAGGCGCGCCGT
ACTTCGCTTGGAGGCTGCTCTAGCGACGTGCGATGCACGGGATAAGGTTA
TTTCGGCTGCAGACGAGAGAGTGGCCAAGGACATATTAGAGCTAGTAGAT
CGCGCGCAGAACAAGCCGCAAGGGTCGGTGATAGTGACTACCTGCCCCAT
GCCCTTGGCAATGGAACCGCTGCTCGTCCAGGAACCAGTCGCAGCTCCGG
TGGAACCCCCCGCTAACTCCGTCACCACGGCGCTCAACAAGTGGGTCGAA
GGAAGCTTCTTCAAACGGTTCGTGGCGCGCACCATGGCAAGGAACAACGT
GGACGCCACCTTCTTGGCTACACGAGCTCTGTCGCCGGTGGATACGTGGT
ACGTGCTATCCACTTGCCTGGGACGAGGAACTTTCGGTGGCGTCTTCAAG
ATAGACGTCCTCACCCTGGGGGAGAGCTTCGCCATGAAGCTAATCAATGA
GGGAGAGGGCAAGAATGCTCGAAGGCGAACGCGCAGGTCGCAAGAGTCCC
TGCTCGGGGAGATGGTCATCTGTGTCTGGCACGGCTCGCAACCACTATCG
GATGATTTGTGTGATTCCTCCCATACCGGCCTGATGTTTTCGTCCTTGGC
TGTCAATGTCCCGCCACACCCGAACGTCCTCCAAGCCGTGGGAGTAGATG
ACAGGGAGCTAGACTGCATGAAGATCGTCTACCACCTTGCAGAGGGGGAT
TTCAGCCGCTGCGCGTGGGGAAGCACAGAAGACAGCGCGGGGACGAAGAT
GCGGGAACATCCATGA back to top
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