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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1135_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 39 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1135_8a-0001 ID=EsuBft1135_8a-0001|Name=EsuBft1135_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=397bp|location=Sequence derived from alignment at Scaffold_582:442875..452162- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCAGGAGGCCGCTGTGAGAGGTGCCCATCTTGCTCGGTTTGTTGTGGTCG TCATGGGGATTGGGAGCTGGATGGAGCTTGCTGCTGCTGGTGAGGTGGGA GTGGGGAAAATGCAGCTGGTGTTGTACCTGATTGCCCTGGGGAGGGTCGT CGAAGAAATTCAACGTGTCCCCCTGCCGAGACGCACCAGCGGTTGCGGTG GCGGCAATCGAGAGAAAAAAACATGGTCGTATGCATATCTACTGCAGCGG CGGCGGCATCACGTACTGCGAAGAAAAGTTCATGGCGGCGAGAACAAAAG AGGCTGCTTCAAAAAACGTTGCATGGTTCGTTCACCAGCAGGTATACCAC ACTCGTTGCTGGAGTTCTAGAACAACCTTGTTACGTGTTTCGTTTTT back to topprotein sequence of EsuBft1135_8a-0001 >EsuBft1135_8 ID=EsuBft1135_8|Name=EsuBft1135_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=105bp
MGIGSWMELAAAGEVGVGKMQLVLYLIALGRVVEEIQRVPLPRRTSGCGG GNREKKTWSYAYLLQRRRHHVLRRKVHGGENKRGCFKKRCMVRSPAGIPH SLLEF back to topmRNA from alignment at Scaffold_582:442875..452162- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1135_8a-0001 ID=EsuBft1135_8a-0001|Name=EsuBft1135_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=9288bp|location=Sequence derived from alignment at Scaffold_582:442875..452162- (Ectocarpus subulatus male Bft15b) CCAGGAGGCCGCTGTGAGAGGTGCCCATCTTGCTCGGTTTGTTGTGGTCG
TCATGGGGATTGGGAGCTGGATGGAGCTTGCTGCTGCTGGTGAGGTGGGA
GTGGGGAAAATGTGAGTGGTCTCGCAGGATCTCTCTTCTTTTTTTTCACG
AACAACCAAGAACCCGTCATAAGACGGTAGTTACCGGCTTACAACCCGTC
ATATCACCAGTATTCCAAACTGTGGTTGTTTGATCTTGATCTCATCAGCA
ACTCGGCACGCTCAGCAAGTAAGTGTGCGCTTTGTTGGTGACGGAGTGTC
ATGGCGTATCACGCTGCTCCTGTGCGCTTTGAGTTGCAGATAGCAACAAC
GAAAAATATCGACCGCTCTGCTGTTGTTACGACGTTTGACGGGAAAAGAA
TCGGTCATGTTGATGTCTCAAAATACCACACTTCCAGTCTCCGGCCAGAT
CCTTCAAACGGATCCGCACAGGGCCAACATACGCGGACGCCTTCCTTCCG
TGGTCACAGGTCAACGATGTACCCAAAAAGACGGGAAAAAAAATGACTCA
GAAAATTATCAACGCGAGATGTACTGCAGAATACCTATCTATCCATCTTG
TCGCATGTCACGAAAACAACACCAGGAGACGAAGGGACGAACCTCGGACA
AACAAAAAATACCCCATCGAGATAATACTACAGTTGGCGCCAACTGTACT
AGGATATCATTGGGATAAATGTCGGTTGGTCCTAGCGCGTCTAAATGTAC
ACAAGAGGAACGTGCTTTGGCGGGGGCGGGTATGCCGGCAATGCCTGCCT
CGTAGCAGCTGCATCCCTTCAGCTGTGCGTGGATTGTGGCGAGGTTTGTA
AGAGTAAACACGTGACAGCTTGTCTGTATCATTTTCTTTGAAATCGTTCA
CCAGCTTCTCGCGTGCGGCGACCTCGTCCGAGGAAGAAGTGGAGTGTCCC
GAGCAGCAGCTGATGCAGTCTCCATTTCGGGGAAAACCGTTCCCAAGCCA
GCTTCGTGCATGCATCGTGAAGCGAAAGAGAGGCTGCCAACGACGGACAT
GCGCCGTATTTCCGTCAAACGGCGAAATATCCTCCCTGGGGTTGTTTCAA
ACACCACGTTCCCTCGGTGGAGATGGTTGGTGGCGCTGGAAGACGCCATG
GCTCGATGTAGTTTACTGTACGTGCCACGCTGGGCTAAAACCTAGCAGCG
GTGTACACCTTCATTCAGCTGTATGCTGTTGCTGGTGATTGTGGCGAGGT
GTTTGGATTGAGTTCAACACAGAAGTGACATTATTTTCTTCTTCGCACAG
AGCCCAAGCTGCCTTTTCATATCTGTCTTTTTCAAACGGTTACAGAATTG
GTGAATTGACAGTTTCGGACCCAAAAAAATAATAATTTCCTTTAAAATAC
CGCATCAAACCCGCACGCAGTAGGATAGAGGCGTTGCCGGTGCTGCAAGT
ACTCCCATCACCTTGTTTCGTGGTATCGCTGGGTTAGTTACAATTGCGTC
ATTAGCGTGAGCGTAAATGCGACATACATGAAGCATCAGTCCTGCGCGCA
GCTACCGTATAAATAACAACTCTACACACGAGACACGAGGTGGAAAATTG
ACCTCTTCCGTAGCGGATTCACGAATAATGAATATGGCCATCCCCGCCCC
CCTCCACCCAATACTTTGGCCACACTGAAAATTCTTCCCCGTGCGTGATA
AGAACATCTTCATCTTAACCTACATAGTCAATATGCAAAACGTCGGACTC
CTGTTATTTTTCATGCTATACTGTTCTCGGCCATGCGAGTATTTTCGTTG
CGAACACACACACTAGTACTACACGTGCGCTGAAGCCCCGGGACCGTCCA
GCTCGTTTCTCTAAGCGCCAGCGTCTATCTCCTGGACTGCAGTACGTAAA
GTTGGCTGCCAATCGACGTTCTTGACTGTGATTGGTTTCGAAAACGACCG
AGGGAACACCCGGCAAATCAATTGCACACAAACGAGTCAATCAGACCAAA
ATCGGCAAGTGCTGCGAGACAAGAAATCGTCCTCTGTACTGTTGCCGCCC
AGAGCCAGCCGCGATTTGGGGCTTGCTTGTCTCCGACCGCATATCACGTA
GTACATGTAGTCTATGCCTCCACGCTCCCCTCTTAAACAAACGAAAATAT
TTCTTTCAAGAAACTAGTATTTGATTTAGAGGATCTTCAGCGGAAGGTGG
CGTGTTCTGGAGGGACTCGACCGGTGCACTAGGAGTATCAACACCCGTGG
TACATACCATGGTACAGCAGTATAATAAGCATAGAGGCACATCTTTCACT
TCTGAGTCGGGTTCTTGTGCGGACGTACCTTCTTCCATGGAAAACACACT
TGTTGCTACAAAAAAGAATGTATGCTTGTGGTTGTCACGCTTCGTTTCAT
GAGCAAAACTCGAAAGCTCGACCCGGAACGTGAGGGGGGAAGGTCCTGAT
TGGCGGACGATTCGAATGGGGGGAGGTCCTGATTGGGAACATTTCAACAC
AGCGGGGGTCGTGCTAGCTGCTGGACCATTAGTTGGAGGGGTCTTGGGGA
GAGGACCGAGCGTCTGTCTGCGGAGCAACCGGCAGCACGCCACATGATGA
TGAGTGTCTTCCTCTCTCCCAGAAAACGAGCGAAAGAGGAAGCTCATAAG
AAATGAAATTCTCGCCACCCCGCCGACTCCCACGGCTGTCATCACCGCGG
GCGCTACCATCACTACACTACTACTGTGCTCTACTACAGTACCACAACAA
CGACGAAGTAAAGCTTGCTCCCATCGCGTTCCCTTGAAGCAACGGACGGA
ACCAATCTCTTGGTCTTTCGCTTTTTCTGTGCCGCACCGAGTTGCGTGCA
TGCGCTGCCAGCCCTGCAAGTGGGTCGTGGTCGATCTGGCGCCGCAAGAC
CGTCCCTTGAAATAAAAAAGAGAGAAAAAAACGCTTCCAGGAGCTCATCC
CACCGAGAGAAAAATGTAACCAATACTTCATCTTTCTTCGCTGGGGAATA
GCACACTACGTAACGCACCATACAAATATGTATATCATACATGTACTATT
ATGCATACATGAAAAAACAGCAGAGAAACAAAAAAAAGGAGAGATAGACA
ACGTGTACAGCAGCGTTGTACAAAACTGGTCCGATCACTCTCGCTCGCGA
TAAGAGCTGTCAAACGAAGCACACCCCAAAAAATAAACNGAGATAGACAA
CGTGTACAGCAGCGTTGTACAAAACTGGTCCGATCACTCTCTCTCGCTCG
CGATAGGAGCTGTCAAACGAAGCACACCCCAAAAAGTAAATNGACCGTCC
CTTGAAATAAAAAAGAAGAGAAAAAAACGCTTCCAGGAGCTCATCCCACC
GAGAGAAAAATGTAACCAATACTTCATCTTTCTTCGCTGGGGAATAGCAC
ACTACGTAACGCACCATACAAATATGTATATCATACATGTACTATTATGC
ATACATGAAAAAACAGCAGAGAAACAAAAAAAAGGAGAGATAGACAACGT
GTACAGCAGCGTTGTACAAAACTGGTCCGATCACTCTCGCTCGCGATAAG
AGCTGTCAAACGAAGCACACCCCAAAAAATAAACCAAATTAACAGGCAAG
CTCAACCCCCTCCAGCACACGGGACACCGACGGATAGCTCNATTAACAGG
CAAGCTCAACCCCCTCCAGCACACGGGACACCGACGGATAGTTATTTCCC
CTGCTGACCTTCCTTCCCTACGTCCCGTCCATTCATGTACGTGAGGGGTT
GTCCCTGGAAGCACAAGCAACCCAACGATGACCGGTGTGGGACCGGGACA
CACTGGTGGTGGGGGCGAGGGGCGGATGGGAGTTGTAAATGGTACAAGCA
TACATGTTGCCTTGACACCCACTCGCTCGTGTCAAAAACGCAAGCAAGCA
AGCGCACACATGCAGACACAGGGACACGAAACACAACAGGCGACGTAACT
GTCGCCACAACTATCCGGAGCCAAGTCTGTCTGCGACCGACGACGCATGC
TCGTCTCCATGGACGGACGCCCCCTCCCCCCCGCCCTCTTTTCTATTTCT
CATATCCACGCATCGTGCTCATACCCAAATGCCCGAGAAAAATAATGATA
CACTTCCACCACAGCCACATCAGGCAGACAAGGCAAATGAAATAACAAAA
GGCAGATACCCGCCGATCCATTAGAAATGAGGGCGGGCCATGACACCACG
GGAATGGAGCAAAATACAACAATAGGAGTCTCTCTTGAAATGGTATTCCC
ACGGCCACTGCAGTTCTCTCACGCACGACATCAACAGGGGGGGTGGTCGA
AAAGGAACCTCGTGTGTTGCTACTACCTGCTCGACATTCTAAATAAACCA
AACCAACCGACACGCAAACCAAAGTTCCAAAAACTGGCGAAGCAACTAGT
TCGTCGCGGACTATTCGAAACGAGGCGCCGGGTTCGGTCTGTCTCAGGAT
AGACAGAGAGAGATGGAGAGAGCAACGACAGGATCAAAGGGACCAGCAGT
CATCTATGTGGCTCTCCATCGAACTGCGAGTATGAATGCCACCCCTCTAC
GCCCGGCCGTATGCCACTACCTGCCCGCCCTACTACAGCAAGGCCGATCC
GCGACCACAAGCTCTTTTGATGAAAAAGGTAGGTGGTACAACCGCCCCCG
CCCCACATTCATCCACCCACCCTCGATGCCTCGATAAAAACGCCCTTTTG
AAGCGGGATGGCTAAATCCAAGCAAAAGCAACACCCGCCCTCTCGCGGAG
CCGAACAATGGGGGAAAGGTCTAGATACTGCAAACCAATCCTCCGTCATA
GCCGTGTAATCATATATTCTCTTTGGGCATGGCGAACCCTAACGCACCCT
TCTTCGCGAAACCGCGTAGATATTACATGCTTGGGGGGGAGGAGAGGAAA
CCAGGTGATGAACAACGCCAAAAACAGTATACGAGGGTCAAAACATCAAC
ACAATAGTCAGTCTCAAAACGACATGCCGTTTGCCGTCCTTGTAGCAGTT
TGAAATCGAAAAGCAGCCTTTTGGAGCCTAGCTCGCTCGCCCTGTCACTT
ACCCTGCAAACATCAACCGTGACATGCTGCTGCTGCTCCAGCTGCTATTG
CTGTCGACCAAGACGAAAGTGCCACTATTGTCTTAAGATGACGAAATCAT
GTCACGAGCAGCGTTCTACAACATCAATAAAACACGCGATGATTATCGTA
TTCCCCCAATCTAAGGTCTTGATTCCCATCTCTTCTCGAGCCCCTTCCCG
GACCGAAATTTGCCAGTAAATACAGGTAACTGCACCACAACACTACTCTT
GTCAAAACAGCCGACAACATAAAATGATGCAAAGTTTGCCAAGTGTACAC
AGCTCGCGGTAAGTGCTAACTGATCCTGTCGTACTTTCTGCTGCTGCTCC
CGTGATCCCTAAATTTGTTTGCCTTGTGCCACCGCACGCCGGCCGGCCCA
AACCGAGACCCCCTCACTCGAGTTCAAGACAGAAGCAAGAAAAAAAAAGA
ACACACACACAGTAGACTAGTTGAACAAGACAACAACATGGGACAGAGAA
AACGAGAGCTACAAAGAAACGAACCGGAGAACAAAACAAGTCGGCTAAAC
AAAACGGAGAGAGCAAGATGGAACAACAACAACAGCGGCGGCGGCGGCGG
TGGCGGCAGCAGCAGCAGTCAAAGCCCATCTCCCTCCTCCACACACACCC
TAGTCGTGTAGTAAACGTGAGAAAAAAAACGCTCAGAAAAACAAAACTAA
ACAACGCTCCACACGTGCGTAAAAACCGTTTGGGCGGCGGGAGAACGGAC
AAAAATAAAGTTTTAGAAGGTGGTGACGACCGTGAAGCCAGCCCCACACT
CAATTCGCTACTTCTCTGGGAATACACACCCATTTCATACAAGTGCCTGA
AACAGCAGCAGTGGTGCAGCATCGGTGGCCGCAAGTTTCTGTGCCACCTT
TCCCCCCGCCCTCCCACGAAATCGCACAACAATATGCCCCCAAACGGCCG
CACACACGCGCGCGAGCACACACACCTCATNTACAAAGAAACGAACCGGA
GAACAAAACAAGTCGGCTAAACAAAACGGAGAGAGCAAGATGGAACAACA
ACAACAGCGGCGGCGGCGGCGGCGGCAGCAGCAGTCAAAGCCCATCTCCC
TCCTCCACACACACCTTAGTCGTGTAGTAAACGTGAGAAAAAAAACGCTC
AGAAAAACAAAGCTAAACAACGCTCCACACGTGCGTAAAAACCGTTTGGG
CGGCGGGAGAACGGACAAAAATAAAGTTTTAGAAGGTGGTGAGGACCGTG
AAGCCACCCCCAAACTCAATTCGCTGCTTCTCTGGGAATACACACCCATT
TCATACAAGTGCCTGAAACAGCAGCAGTGGTGGCAGCATCGGTGGCCGCA
AGTTTCTGTGCCACCTTTCCCCCCGCCCTCTCACGAAATCGCACAACAAT
ATGCCCCCAAACGGCCGCACACAGGCGCGAGAGCACACACACCTCAAGGT
GGTTTGTGGAATCAATGCTTTAAACACGAGGGGGACGCGGTGGATGGATA
CCTAAGAGAAGTCAAAGCAGCAGCAGCAGCAGCAGAGCCCAGTACGTTGG
GGCACTCGAAAAAACTAAAACTCTCTCTCGGCCGAGTCGATCGCAAGTGA
GACGTCGACCCGGCGCGACGGGTTTGAGGGAAGTAAAGGNCATTTCATAC
AAGTGCCTGAAACAGCAGCAGTGGTGGCAGCATCGGTGGCCGCAAGTTTC
TGTGCCACCTTTCCCCCCGCCCTCTCACGAAATCGCACAACAATATGCCC
CCAAACGGCCGCACACAGGCGCGAGAGCACACACACCTCAAGGTGGTTTG
TGGAATCAATGCTTTAAACACGAGGGGGACGCGGTGGATGGATACCTAAC
AGAAGTCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGAGCCCAGTACGTTGGTGCACCCGAAAAAACTAAAACTCTCTCTC
GGCCAAATCGATCGCAAGCGAGACGTCGACCCGGCGCGATGGGTTTGAGG
GTAGTAAAGTCAGGAACGTCTAATCACCAGCGCTGGAGCACACGATCTTA
CATGACGCCGCCATCTCATAACACACATACAACAAGTCGTGTGTGCTCCG
TTCTGCCGCCACCAGAATTCTGCAGGTCGGGGGACAAAAGTATACCGCCC
CAAAAAACGCTTCGCGAAGAACTGAAAGGGTTCTTCTCTCTCTGTCTGGC
CGGCCGCGCCTGAGATAGAGAGAGGGGAAAGAGAAAGGATAACGAGAGAG
AAGACTGCTACCGTCTTCGCCCTACTCGCCAACCAACCTAGTCGTTGGCT
CTTCAAAACCACGGCAGGACGCCCGCAAAAGGCACACAAACCAGAACACG
CACGGACGAGATTCACGCCCCCCGACACATACAGATCGCGTAGGGTACAA
AGAGAAATCTGGTAAAAAAATTAACCTCACCCCCATCACCATAACGCACG
CCCTTCCGCCCACCCTGTCATATTTGGAATTCTTATGGACGCGTGACGTG
GCATTTCATAAATATTTGTTCTTCTTTTCGTCCCGACTCGCCTCCTCTCA
CGTTCCCCATGTGCTTGCTGAGGGGCTCTCGCAGAGTAAACGAGGAACAC
GCCACCTGCCACTCGAGCAATCAACAAACCCGACCAACGCATCACACCCT
GTACGGTGGGGCGAGCGGGGGGTTCGCAGTCCGGAACCAAAAGGCGACGT
GCCCCAGGGAGGTAGGGGGTGGTGGTGCAGGGGAGGGGGACAAACCTCAC
CCCCCACCCATACACCCACCCAGGTCAAGCTCACCCGTATCTGTTGGTTA
GTGGCCGCTACACAAGGAAACAAACACGCACCCTGTTACGGCACAAAACA
AAAGTGGCGTCGCCCCTCTTCCACCTTTACTTGCAGTGTTACCCTGCCTC
CCGCCCCCCCTCCCCCCCGCGCGCGCTCCGGTCATCGTCCAATGTCAAAA
CTCTCCCGCTCCCAACACCACGTGCACCCCCACCCCCCACCCCCCACCCC
CCTCCCCCCTCCCGCTGCCAACTGCCCTCAGCAACGCGCGGAGTGCTTGT
TTCATAGCATAACCCAAGCATCAAGACCGTTTGTCTGCTGCGAAACGCGC
TCTTAGCTCTCACGAAATATTATTCTACCGCGCTTCTACTTCTTCGCGAT
GAGGTCACTCGTCCATGTTGTGCATGTACATCGGCGAAGGGATGGTCTCT
TGCTCCTCCCGCGAGGTATCGTACCGTTCCGTCAGGGTGCGCCCGAAAAA
CACGAGGAGTTCCTGGAGTAACGAGGGAGAGGCCGGCAGGCAGACATGCC
GGGGATTATGGAGGGAGGACGGCAACGAGTCAAGGGTCAAACGACACCAA
ACAAAAAAAAAAGAACGGGCTTGCGGTGATCACCGAGCAATTGCAAAAAA
AAAAGGTCAACATAAGTAGTGTGGGATGGGCAACTCATCCGGGGCGGATT
GCCGATTTCATACTATATACAATGTTTTACTTGCTTCGAAAAACCTGCGT
AGACGACTGCGAAATTGGGAAACTCCATGTACTCTTTGAGGTTCACGCGT
CAAAGGGTCACAGCGCCCTCGTTGCTCGAAATACCCACATGGAAATTGGG
GAACTCAACGTACTCCAGGTTCATCGCGCCCCCGTGCCCCGCGCCTCCCC
CGACAGGCAGCTGGTGTTGTACCTGATTGCCCTGGGGAGGGTCGTCGAAG
AAATTCAACGTGTCCCCCTGCCGAGACGCACCAGCGGTTGCGGTGGCGGC
AATCGAGAGGTAGGACAGGTAACAGTGAAGGGCACTACAACGACGCTCAA
AAGCGGGGGGGTTGGGTTTCCAGTGACGAGGCGGAGATGGAGCATGCATG
CACACATCTCGTAGATATCGTGGGTGTTTTTCAACTCCGAGGCTCCCGCT
ACCCACATATTTGTACTTGCGCTTCGGGTTGATTGGAACAAACAAAACCT
AGACTATTCCTCGCAAACCTCCGTACGAACAAAGGCGGGGGAACTTGAGA
CCTCCCCCTCCGCGCGCCCCACCTGCCATACACTGCTTGCTGACGGCCCG
CTTAGAAAAAAACATGGTCGTATGCATATCTACTGCAGCGGCGGCGGCAT
CACGTACTGCGAAGAAAAGTTCATGGCGGCGAGAACAAAAGAGGCTGCTT
CAAAAAACGTTGCATGGTTCGTTCACCAGCAGGTATACCACACTCGTTGC
TGGAGTTCTAGAACAACCTTGTTACGTGTTTCGTTTTT back to topCoding sequence (CDS) from alignment at Scaffold_582:442875..452162- >EsuBft1135_8a-0001 ID=EsuBft1135_8a-0001|Name=EsuBft1135_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=318bp|location=Sequence derived from alignment at Scaffold_582:442875..452162- (Ectocarpus subulatus male Bft15b) ATGGGGATTGGGAGCTGGATGGAGCTTGCTGCTGCTGGTGAGGTGGGAGT GGGGAAAATGCAGCTGGTGTTGTACCTGATTGCCCTGGGGAGGGTCGTCG AAGAAATTCAACGTGTCCCCCTGCCGAGACGCACCAGCGGTTGCGGTGGC GGCAATCGAGAGAAAAAAACATGGTCGTATGCATATCTACTGCAGCGGCG GCGGCATCACGTACTGCGAAGAAAAGTTCATGGCGGCGAGAACAAAAGAG GCTGCTTCAAAAAACGTTGCATGGTTCGTTCACCAGCAGGTATACCACAC TCGTTGCTGGAGTTCTAG back to top
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