EsuBft1133_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1133_5a-0001
Unique NameEsuBft1133_5a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_99contigScaffold_99:125188..131405 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FTE9
ProteomeIdEsuBft1133_5
Protein domainsPTHR20854
Protein domainsSSF56655
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsSIGNAL_PEPTIDE
Protein domainsG3DSA
Protein domainsIPR000760
Ownerapollo_admin@sb-roscoff.fr
Noteositol monophosphatase 1 os:sus scrofa gn:impa1 pe:2 sv:1 [Automatic annotation]
Nb exon9
Max annot lvl2880.D7FTE9|-
Length1074
Hectar predicted targeting categoryother localisation
Evalue2.44e-215
EggNOG OGsCOG0483@1|root,KOG2951@2759|Eukaryota
Ec32 ortholog descriptionInositol monophosphatase
Ec32 orthologEc-21_001090.1
Date last modified2016-06-14
Date creation2016-06-14
DescriptionInositol-1-monophosphatase
COG categoryG
Cross References
External references for this mRNA
DatabaseAccession
GO0052834
GO0046854
GO0019751
GO1901576
EC3.1.3.25
GO0044424
GO0005488
GO0044711
GO0044723
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1133_5aEsuBft1133_5aEctocarpus subulatus male Bft15bgeneScaffold_99 125188..131405 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1133_5a-0001EsuBft1133_5Ectocarpus subulatus male Bft15bpolypeptideScaffold_99 125188..131264 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1133_5a-0001-exonagat-exon-105952Ectocarpus subulatus male Bft15bexonScaffold_99 125188..125358 +
EsuBft1133_5a-0001-exonagat-exon-105954Ectocarpus subulatus male Bft15bexonScaffold_99 126725..126818 +
EsuBft1133_5a-0001-exonagat-exon-105950Ectocarpus subulatus male Bft15bexonScaffold_99 127130..127185 +
EsuBft1133_5a-0001-exonagat-exon-105949Ectocarpus subulatus male Bft15bexonScaffold_99 127324..127443 +
EsuBft1133_5a-0001-exonEsuBft1133_5a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_99 127809..127949 +
EsuBft1133_5a-0001-exonagat-exon-105948Ectocarpus subulatus male Bft15bexonScaffold_99 128665..128780 +
EsuBft1133_5a-0001-exonagat-exon-105947Ectocarpus subulatus male Bft15bexonScaffold_99 129413..129518 +
EsuBft1133_5a-0001-exonagat-exon-105951Ectocarpus subulatus male Bft15bexonScaffold_99 130076..130138 +
EsuBft1133_5a-0001-exonagat-exon-105953Ectocarpus subulatus male Bft15bexonScaffold_99 131199..131405 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1133_5a-0001-cdsEsuBft1133_5a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_99 125188..125358 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1133_5a-0001-exonagat-three_prime_utr-1269Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_99 131265..131405 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1133_5a-0001 ID=EsuBft1133_5a-0001|Name=EsuBft1133_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1074bp|location=Sequence derived from alignment at Scaffold_99:125188..131405+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCATGCAGCCATCAGGTGTGCATTCTTCGCTCTCAATGACGTCATGGC
GTCCACGGATGAAAAGGGAGGGGTCCAGACTTGGCAGGGAAGCTTGAGGG
ACACCCCCCGCGTGCTCGAAGAAATGTCATCGGCCGTGCGCAAGGCGGGA
AGTGCAGCCCTCGCGCTTCAACGGACAGAACTGTCGCGAACGGAGAAGGC
TGGCCATCACGACATTGTCACGGAAGGCGACCTCGTCAGCCAGAGAATCG
CGATGGGGAGTCTCGCAAAAATGCTGCCCGGTCTTCCGTTTGCGGCGGAA
GAGTCTGACGAGCAAGCCGTGATTCCTGGTATTCCTCAGGCTCGAATCAA
CCCCCAGGGTTTGGTGGAGGCAGAGGCGTACCTCGCTCTGGATCCGATTG
ATGGCACAACGAACTTTGCCTGTGGAGGACCGGACTGGGGGGTAGCGGCA
GCGGTGGTTCAACGAGACACCGGCCCAACGCACGGAGTTATTTACCTCCC
GGGAAAAGACCTCGTGGTCGAGGCCGCGAGGGGGCACGGCTGCAGGGTGA
ACGGGGAGCTTATTCAGCTAAAAAAAGGCCAGGTATTGAAAGAGTGCCTG
GTAGCGGCGGAGATCGGTAAGTTTGTGCCGGACGACCGGCTGCAGCGGCT
TCTGGGGCTGGTGCACCACTCCATGGGTGTCCGTAACCTCTTCTCTAGCA
CCGGAAACACGGCGGACGTCTTGTCCGGCGTCCACGGCGCGTGGGTCCAC
CTCAAAGGGGGCTCCGTGTGGGACTTTGCGGCCGGCTCCCTCGCTGTTGA
AGAGGCTGGCGGATTCGCTTGTGACCTACAAGGGAAGCCGTTGAAATGGG
ATAAGCTTCACATGGAGGTTGTACTTGCCGCAAACGAGGAGATAGCGAAG
GACGTTGTCAACGTTCTGAACATCAAGGCTTGAGGAAAGCCACCGAGAAT
CCACAGCGGCCCGCCAAGCAAGGTTGTTTCGCTCGCAGGGGTGGATATTT
CTTCCTCTGATATACCTCGACAGAGAAAAGATACTTGTCACACACGCAGT
CTGTTGCGCGGCGTTGCGGCTCTT
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protein sequence of EsuBft1133_5a-0001

>EsuBft1133_5 ID=EsuBft1133_5|Name=EsuBft1133_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=310bp
MHAAIRCAFFALNDVMASTDEKGGVQTWQGSLRDTPRVLEEMSSAVRKAG
SAALALQRTELSRTEKAGHHDIVTEGDLVSQRIAMGSLAKMLPGLPFAAE
ESDEQAVIPGIPQARINPQGLVEAEAYLALDPIDGTTNFACGGPDWGVAA
AVVQRDTGPTHGVIYLPGKDLVVEAARGHGCRVNGELIQLKKGQVLKECL
VAAEIGKFVPDDRLQRLLGLVHHSMGVRNLFSSTGNTADVLSGVHGAWVH
LKGGSVWDFAAGSLAVEEAGGFACDLQGKPLKWDKLHMEVVLAANEEIAK
DVVNVLNIKA
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mRNA from alignment at Scaffold_99:125188..131405+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1133_5a-0001 ID=EsuBft1133_5a-0001|Name=EsuBft1133_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6218bp|location=Sequence derived from alignment at Scaffold_99:125188..131405+ (Ectocarpus subulatus male Bft15b)
ATGCATGCAGCCATCAGGTGTGCATTCTTCGCTCTCAATGACGTCATGGC GTCCACGGATGAAAAGGGAGGGGTCCAGACTTGGCAGGGAAGCTTGAGGG ACACCCCCCGCGTGCTCGAAGAAATGTCATCGGCCGTGCGCAAGGCGGGA AGTGCAGCCCTCGCGCTTCAAGTGTGTACCACAGCGACGAATTATTATGT GATTACCTCTGTGGACACACTGCTGTTGTGTATGATAGAGACTTCAACCA CAACAGCGTGGCGTCATGTACAATATACTCTAGCCATGAGCGTTTCGAGC GGTTCACAGATGCAGCGCCCGATGATCCCTCATTTTTCATTCGAACGCGA TCGTTCGTTACCCGGGTTCACATGGTGAACCCGCCACTTGGTACCATGTA AGTGCACCATCGTTGGAATATCGGTCCGGCACATGAATAAGAACGGAAAA TCTCATCGATTGGGTCCCTAATTCTTGACCAGGATCTCGTGTTCTTGACC ACACTCACCACCTAACAACACCAACACCACGCCATGCTATATCCCATATC GATCTCACCCTCTCAGACGTACTCAAGTACTATGTACTGCTGTACATGGC TGACCAAACGGCCACAGCGGGATGCGTGTGTCCCTGGGTGTTCATCCATA CAGGTTTGCATTGAGTTCATGGTGTTGGACGATGACCAGCTTGTATTTTT AATGTTCCCCGAGCAGCATGCCACGATATATAATGTATGGTGACAAATCG AATGTTGGTGCAGACCGAATTTTGGTGAGTTTACGCCGCGGGGGTATAGA AACCAAGCGAAGGGCGGTCGATAAGGACAAGACCTTCAACAGAGAAGAGT TTTGCTGGCACCGTTAGGGGAAAAGTCTCATCGATTGGGCCACTCATTAA TTCTTGACCACATTCACCACCTAACAACACCAACACCAACACCAAGCCAT ACTACATATATTAGACATATATCCCATATCCATCTCACCCTCGCACACGT ACTGAAGCAACTGCACTGCTGTACGTGGCTGGACAAACGACCAGCGGGTA TGCGTGTGGTCGCTGGGTGTTAACTATGCATATTGACGCAGACCCCATTG GTGAGATTACTCCGACGGAGGAATTTGACGATGACATCGTATCAAATCAT ACAGCAGGCGGGCAGCTTTGTATGTTCTTGTTGTGCATGTATGTATGTAC TGGTACATCATCACATGCATTCGAGACGCCGTCGTACGTATACCGAGCGA TGGCGACAAAAGAACACACACAGCGGCAGCGTCAGCACCACCTTCTTCTT CGTTCTATTTTCTGTTTCGTCGTGGCGCCATCATCATGACATGACCAAGA AAATATCAACATACAAAAATCAGAAGAGTGTGCATAGATTCCATTGGACG AGGGTAAATCCAGCCGGATCCGGGGGGTTGGACAATGAGTAACGAAGATG TTCAGAGATTCTCGAAAGGTTCCAGGGTCTGTTTGCACCATGCGCCTCTT TGTCGGCGTCCCTATGCCGCCGTTGCGTCGCGCGCAGCGGACAGAACTGT CGCGAACGGAGAAGGCTGGCCATCACGACATTGTCACGGAAGGCGACCTC GTCAGCCAGAGAATCGCGATGGGGAGTCTCGGTAAGGGCCGCACCGGGCG CGCCCTCGCGCTATTTGATCTGTTAACCGTGTATCGATCAAGTACAGGCT CGAACTTCGGCACAAGCTATGACTAAGGAACAGCGGTTCGCCTTCATACA ATGTCCGGTGCACCAGAGCAGCTTATCAATCTCGTGCAAAAGGTTTTGGG ACATGAATATCATGAGACTTGACGAAAACCTCGACTTTCGCTGCACTTTG TCGTTGTTTTCTGCGGACTTTTTCTTCCTACCCCGCGAAAAACTCTTTGT GTTTTTGTGTCCTTCGGTGCGATGTTTTCCCGCGCCCAACAGCAAAAATG CTGCCCGGTCTTCCGTTTGCGGCGGAAGAGTCTGACGAGCAAGCCGTGGT GAGCGACACAAGTGTGCTTTGCTGCAAGTTGCGGGTGTCACAAGCCACAC CATCTCCACAACGTTGATTTCGAGACAGACTTTCCTTCCACGAGGTCATA CCTTTTCCAACGTTCCCTTAACGCATTTTCATGCAGATTCCTGGTATTCC TCAGGCTCGAATCAACCCCCAGGGTTTGGTGGAGGCAGAGGCGTACCTCG CTCTGGATCCGATTGATGGCACAACGAACTTTGCCTGTGGAGGACCGGAC TGGGGGGTGAGCGAGAGTAACTACATACAATGGTGATGGGCATGGTCTAC CGCGACAAGGCAGCTGCAAACGTATGGAGAAAAGCGCCCCGCGAGCGAGA AAGCCGTGGGACTGTCGGCGGGCGACCCAATTTCGTGTGTTTTTCACCTC TTTACGTAGCAGCTGATGCGCGCACGCACAATGCTATCTAACACCTTTCT GTAGGCCAACCCCGAAGCCCCGTGAGTTGAAATCGTTTCCCTCCTGGAGT TCGCCGAAGGACATCGAACAATCTGGGCGAAGAAGACGTTCCAGCCTGGG CGCGAGTGAATCCTAGACACACCTAAGGTTATCCATGCACTACCCTGTTG GTGTCCACGCGCACGAAGCAGGTAGCGGCAGCGGTGGTTCAACGAGACAC CGGCCCAACGCACGGAGTTATTTACCTCCCGGGAAAAGACCTCGTGGTCG AGGCCGCGAGGGGGCACGGCTGCAGGGTGAACGGGGAGCTTATTCAGCTA AAAAAAGGCCAGGTTAGATTTTTTTTAGATAATGTCTACCGATTGCATCG TAGCTACCGTTGCTCAAGTCCGTAGGTGGAGATTGGCATGGGATTCACGC TTGGGTCACTCAGCGGGTGAACACGCACCTAACTTGCTGGCGGCGGTCGC GCTGGCCGACCAATGCCGGCACGCTACTCTGTGTTTCGAAGTGTATGCCT AGGTTTTTCTTTGGCGTTGTGTCCTGGCCATCGTTGGCAGGGTTTCACCC ACATAGTGGTTCATTCGTATCCTTCTCCTTGGAACCTGCAGGATACCCAA TCGAAGAATACCCGCGCATTCATGGTGCATTTATAGTGATCGAGTTTCGT TCGAGAGCTGGCGGTAACTCCTGTGAACGCTTCCCACGTGACTGCTCTTC GCCTGACACCGGCAGTTGCTGTCATGTGCTGCGAATGGCACATCAGGAGC GTTATAGGCAAAGCAGGGGTGTGATAGGCAAAGACCAAACATAGAAGGCG ATGAGTTCAGTTCACACCCACCACGGTGTACATGACACCCTTGTGGGGGT GAAAGCCTCGGCCCATGTAGGCAAGGCACGCCAAAGATTCTGCAGAGGAG AACATGATCTGTAGGTTTGAGTAACCAGAGTACAAAGTTGGTCCGTCTTG TTGACGATGAAGAGGGTACGGTAATGAGTGAGTTTGCCCCCGCCGCGCTC GTGGACGACCGACCAAATACTCCTCAGGTATTGAAAGAGTGCCTGGTAGC GGCGGAGATCGGTAAGTTTGTGCCGGACGACCGGCTGCAGCGGCTTCTGG GGCTGGTGCACCACTCCATGGGTGTCCGTAACCTCTTCTCTAGGTGTGAA TCAGTGTCATTCTGTGGTCCCTGTGTTGAGGGCATGTAAGGAAGGCATTG CCCAACACTTTCGAGGACCAACATCTACAATATTCGAAAACCATTTCTGT GATATTGGTGTTTACCGGGCGCGGCATTTCCTTCTTTGTTGGGTGGATGT CTTCGGACAGGTATGACGAGAACTAGGCATAGGTTTTCCGCGTTTGGCGT AAGGGTGCAAACGATAAAAAATCCTCCTCCGCCGAAAGGGAAGCGACACG AAAACCCACCCATGGCCGCATGTTCGGCCTTGCTGTTGTTGGCACAAAAT GTTTGAAAGTATCGATTGTTTGATCTCGGAGTACGTAGAATACGCAAGCA CCTTTGCCCCGTCATCAGCCTTGCCAAATACCTATTGCTTGGGTGACAAA ACACACGGTTCTTGACAAACCATTCGGTTCATTCAATGTTCCTTCTTGAA TTTGTTTACGCGTTGCGTATCATTACGTAGACTCCTGCTTGGCGTCATCG GAAGTCGTATTACCCTCCCTATCGCGTAGTTCGACGTCAACACCACATAG TCTCGACGCCCTCCCGGTTCCACTGGAGCAACATTTGTGCCTCTGTCTCT GCCCCTCTCTCCTTGGCTGGTGCAGCACCGGAAACACGGCGGACGTCTTG TCCGGCGTCCACGGCGCGTGGGTCCACCTCAAAGGGGGCTCCGTGTGGGA CTTTGCGGCCGGCTCCCTCGCTGTTGAAGAGGTATAGCTCAGCCCAGCAG GGGTGGAGAGAAGTTCATGTGCGCCCTTCGCAACTTGTTTTTTCTCTCAA CACCAAATCTGTTTCGGACTGTTGGCCACGGCACAGCCCCGAGTTGCCTG GCCGACTCAGTATTGCGAGGCATACTTTTGTAAATTTTGTTCCAAGAGGA TGCTGACGTTTGGTTCGACAATTCCCAGCATCTGGCCGCCAGCTTTCCTT TGTGGCTGTTTTCTCTCTCTCTGCTGCTGCAATAGATCCATGTCGCCCTT CTGTGCCGGTAATATGGTGCAGCCAAGCAAGGGACACGTACGCTACAGCA GTAGCTGTGCCGAAGTAGTTGAGGTGATGTTTTTCCTGCGGCTACCGGGG CTCTCTATCGGCGTCGATATTTCATACAAAGACACAACACAACGACACGC AAGTGATTTGCAAGACGGTTCCCTTGGGAAGTCGCCCAAGTAGAGGACAA TTCCTCAACCCGCGCATCCCCAGCCCATCATTGTGCGACACACCCCTTCT GCTTGCATGTGCCGCGATGGTTGTCCGTTCTCCTGAAGGCTGGCGGATTC GCTTGTGACCTACAAGGGAAGCCGTTGAAATGGGATAAGCTTCACATGGA GGTATGCAGATGATCGTTGTTGAGCGCAAAAATACTCCTTGCCGCCCCCC AGGTGGATAAATTGTGTACGAAATACTGATTACCCTCCTTTGGAGCCCCA TCTCTTTCCCGCATGTTTTCCGAAACGTTGTCACGCGGGAGAATCTTCAT TCGCACTGAAACCGTTGTTTGGCCCAGTCGTCATTGAGCCTAGTCTGACG TTATATCGCACGCGCCCGCTGCGGACGTGATGGGAACGAAAACGTAAGTG CTGATCGATGCTGCCTTTTGAAAGAGCCGTGCCCGTGGCGAATTTCCACC CTGAGGTGTCAAAGCAAATGAGAGAAATTTTCCACTGTTCCCCCCCCCCT GGTGCTTTCCCCCCCGGCCCGTTGACTTGTCACAGAGGGGGGTGACGAAT CGAGCTTTCGAACACCCCGCCTTCGTCTGATGTTGTTATTGTTGCCGTCG TCATCGTCGTAGTTGTTGGCGTCGTCATCGACTTGACATTCCGCCAGCGG TGGAAACTCCTGCACTTTTGACGGGCGTCTCCCCAGGGGATATGGTGGGA CATGTGGCAGGTCACCTCTGGTTGCAGTTTCCCGTTGTTGATGCACTGTT GGTGCTATTCCTTCGACAGTTATCCTGCTGAAAACCAGTACCTGGTATGA AGTACCTTGAATATCTTCTGAATTCGCGGAGTTGTGTTTTGGGATCACCA GTGTTCCCAGGCTAGAACACGATAAATAGCATTCAACTAGTATCGCCACA ATACGGCACATGTGCCCGGTCCTCACGACGCGTCCGGAGTTAGGTCACAA TCCGAGATCCCAAGCAATGAAAGAGAAGCCCAAGCCTCACGGCCAGAGAG AAACCCCAAAAGTTCGGAGACCTATTACGTAGCCCCTATAATTCTCTTGT GGAGGCCGCTTGGCTGTGTTGCCCTCCTGCCGCTGCAAATTAATTATTCC ATGACCAACATCGCTGGGTTGCGCACGGTCATCAACCAATGATCTGCCCT GCTCAAGTTACCTTCGCTCGCTGCTCAGAAATACTGGATACGTGCTGTCC TGATTGTGCAGGTTGTACTTGCCGCAAACGAGGAGATAGCGAAGGACGTT GTCAACGTTCTGAACATCAAGGCTTGAGGAAAGCCACCGAGAATCCACAG CGGCCCGCCAAGCAAGGTTGTTTCGCTCGCAGGGGTGGATATTTCTTCCT CTGATATACCTCGACAGAGAAAAGATACTTGTCACACACGCAGTCTGTTG CGCGGCGTTGCGGCTCTT
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Coding sequence (CDS) from alignment at Scaffold_99:125188..131405+

>EsuBft1133_5a-0001 ID=EsuBft1133_5a-0001|Name=EsuBft1133_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=933bp|location=Sequence derived from alignment at Scaffold_99:125188..131405+ (Ectocarpus subulatus male Bft15b)
ATGCATGCAGCCATCAGGTGTGCATTCTTCGCTCTCAATGACGTCATGGC
GTCCACGGATGAAAAGGGAGGGGTCCAGACTTGGCAGGGAAGCTTGAGGG
ACACCCCCCGCGTGCTCGAAGAAATGTCATCGGCCGTGCGCAAGGCGGGA
AGTGCAGCCCTCGCGCTTCAACGGACAGAACTGTCGCGAACGGAGAAGGC
TGGCCATCACGACATTGTCACGGAAGGCGACCTCGTCAGCCAGAGAATCG
CGATGGGGAGTCTCGCAAAAATGCTGCCCGGTCTTCCGTTTGCGGCGGAA
GAGTCTGACGAGCAAGCCGTGATTCCTGGTATTCCTCAGGCTCGAATCAA
CCCCCAGGGTTTGGTGGAGGCAGAGGCGTACCTCGCTCTGGATCCGATTG
ATGGCACAACGAACTTTGCCTGTGGAGGACCGGACTGGGGGGTAGCGGCA
GCGGTGGTTCAACGAGACACCGGCCCAACGCACGGAGTTATTTACCTCCC
GGGAAAAGACCTCGTGGTCGAGGCCGCGAGGGGGCACGGCTGCAGGGTGA
ACGGGGAGCTTATTCAGCTAAAAAAAGGCCAGGTATTGAAAGAGTGCCTG
GTAGCGGCGGAGATCGGTAAGTTTGTGCCGGACGACCGGCTGCAGCGGCT
TCTGGGGCTGGTGCACCACTCCATGGGTGTCCGTAACCTCTTCTCTAGCA
CCGGAAACACGGCGGACGTCTTGTCCGGCGTCCACGGCGCGTGGGTCCAC
CTCAAAGGGGGCTCCGTGTGGGACTTTGCGGCCGGCTCCCTCGCTGTTGA
AGAGGCTGGCGGATTCGCTTGTGACCTACAAGGGAAGCCGTTGAAATGGG
ATAAGCTTCACATGGAGGTTGTACTTGCCGCAAACGAGGAGATAGCGAAG
GACGTTGTCAACGTTCTGAACATCAAGGCTTGA
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