EsuBft1112_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1112_8a-0001
Unique NameEsuBft1112_8a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_189contigScaffold_189:42553..46234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LCG6
ProteomeIdEsuBft1112_8
Protein domainsCoil
Protein domainsIPR024087
Protein domainsIPR003785
Ownerapollo_admin@sb-roscoff.fr
Notecreatinine amidohydrolase os:pseudomonas putida gn:crna pe:1 sv:1 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length1360
Hectar predicted targeting categorysignal peptide
Evalue1.04e-180
EggNOG OGsCOG1402@1|root,2SG4P@2759|Eukaryota
Ec32 ortholog descriptionCreatininase-like domain
Ec32 orthologEc-26_004970.1
Date last modified2016-06-14
Date creation2016-06-14
DescriptionCreatinine amidohydrolase
COG categoryS
Cross References
External references for this mRNA
DatabaseAccession
GO0044281
GO0003824
GO1901564
GO0008152
GO0044237
GO0046914
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1112_8aEsuBft1112_8aEctocarpus subulatus male Bft15bgeneScaffold_189 42553..46234 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1112_8a-0001EsuBft1112_8Ectocarpus subulatus male Bft15bpolypeptideScaffold_189 42553..46230 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1112_8a-0001-exonagat-exon-1429Ectocarpus subulatus male Bft15bexonScaffold_189 42553..42650 -
EsuBft1112_8a-0001-exonagat-exon-1428Ectocarpus subulatus male Bft15bexonScaffold_189 42691..43027 -
EsuBft1112_8a-0001-exonEsuBft1112_8a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_189 43422..43493 -
EsuBft1112_8a-0001-exonagat-exon-1427Ectocarpus subulatus male Bft15bexonScaffold_189 43906..44141 -
EsuBft1112_8a-0001-exonagat-exon-1430Ectocarpus subulatus male Bft15bexonScaffold_189 44473..44662 -
EsuBft1112_8a-0001-exonagat-exon-1426Ectocarpus subulatus male Bft15bexonScaffold_189 45040..45129 -
EsuBft1112_8a-0001-exonagat-exon-1431Ectocarpus subulatus male Bft15bexonScaffold_189 45898..46234 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1112_8a-0001-cdsEsuBft1112_8a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_189 42553..42650 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1112_8a-0001-exonagat-five_prime_utr-681Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_189 46231..46234 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1112_8a-0001 ID=EsuBft1112_8a-0001|Name=EsuBft1112_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1360bp|location=Sequence derived from alignment at Scaffold_189:42553..46234- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GACGATGGTGGTGACACGAACACCAGGAGCAGCAGCCAGTCATCGGCTGG
CATGGGCTTTAACGACGACTACGAGGTTGTACCTGGTCATAGCAGTCTCC
TGTTTGTCACGCCCTTGCGGAGCCTTCTTGGTCCCATCTCCGGCCGGCAG
CACCAAGTTGCAGTTGACTCATGACACAGCGAGCGGACGTTCGCGTTGCC
GTCGTCCATGCAGTGCAACGAGGGAGGAAGCAACAGCGGCAGCGAGACAG
GGCCGCAGCAACGTTGGGGAAGAGACGGAGCTGCGGCTGATGACTTGGAT
GGAGGTGGAAGCCCGCGTCAAACGAGATACTGCCGAGACTGGCAAGGCCG
CCGTGATCGTTCCCGTCGGCGCCACGGAGCAGCACGGGCCGAACGGGCTC
ATTGGGACCGATCACATGACCGCCGAGGCCGTCGCCCGCGGTGTCTGCGA
GGTTACCGGCGCTATCCTCGCCCCTACCATCAACTACGGCATGTCCCACC
ACCACGAGTCCTTCCCGGGGACGGTGACCCTGAGGCCGGCGACGTTCGTG
GCGGTGGTGCGGGACGTGGCGGCTTCCCTCTCGGGGGCCGGCTTCACGCA
CGTGTTGTTCGTCAACGGCCACGGCGGCAACGTCGGCCCCGCCTTCAAAG
CATTCGCAGACTTTGCAGCAGAACAACAGCAAGCCCGAGAAATGGAGGAA
GAAGAAGCAGAAAGTAGTGGCGGCGGTGGCGGCGGGGACGGTGACAGCAC
AGCCCGGGTAAAGCTGATCAGCTGGTACGCGGGACGTGAGTCCTCGACTC
TTGCCAAGGAGCTGTACGGGGGCGAGGTCGGGCAGCACGCGACGCCGGAC
GAGGTTGCGGTGACCCAGCACCTATTCCCGGAGTCTGTGAAATATGGGGT
CGAGCTAGACCCAGCCGCAATCCAGGTGGCGAAAGACCTCGGGGGCATGA
CGAAGCGGATCAGGGACGCGGAGACGGGGCTCTCCGTCATGGACGTCCAG
GACTTCCGCCGCCGCTTCCCCGACGGCCGCATGTTCAGCAACCCGGCCCT
GGCCACCCCGGAGCACGGCCGACGCCTCCTCGAGGCCGCGGTCAGAGACG
CCACGGACGCGCTGGGCAAGTTCTTGTCCGGGCAGGACGTTGTGGAGGAG
GCGGAGGCGAAGGCCAAGCGGGCGGCCGCTATGGCAGCAGCAGCAGCAGC
GGCGGAGGCGGCGGCGGCGACGGAGGGGAAGACGAAGGCGGGCAAGACAT
CGTTCACGCCGCTGATGGTAGTGGACGCAGCGGTCGAGGCCGGGGACGAA
GACGTGGCGGCGAGGGTAGCAGCAGCGGCGGCAACGGCGGCGGCGCACAG
CATGCAGTAG
back to top

protein sequence of EsuBft1112_8a-0001

>EsuBft1112_8 ID=EsuBft1112_8|Name=EsuBft1112_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=451bp
MVVTRTPGAAASHRLAWALTTTTRLYLVIAVSCLSRPCGAFLVPSPAGST
KLQLTHDTASGRSRCRRPCSATREEATAAARQGRSNVGEETELRLMTWME
VEARVKRDTAETGKAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVCEV
TGAILAPTINYGMSHHHESFPGTVTLRPATFVAVVRDVAASLSGAGFTHV
LFVNGHGGNVGPAFKAFADFAAEQQQAREMEEEEAESSGGGGGGDGDSTA
RVKLISWYAGRESSTLAKELYGGEVGQHATPDEVAVTQHLFPESVKYGVE
LDPAAIQVAKDLGGMTKRIRDAETGLSVMDVQDFRRRFPDGRMFSNPALA
TPEHGRRLLEAAVRDATDALGKFLSGQDVVEEAEAKAKRAAAMAAAAAAA
EAAAATEGKTKAGKTSFTPLMVVDAAVEAGDEDVAARVAAAAATAAAHSM
Q
back to top

mRNA from alignment at Scaffold_189:42553..46234-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1112_8a-0001 ID=EsuBft1112_8a-0001|Name=EsuBft1112_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3682bp|location=Sequence derived from alignment at Scaffold_189:42553..46234- (Ectocarpus subulatus male Bft15b)
GACGATGGTGGTGACACGAACACCAGGAGCAGCAGCCAGTCATCGGCTGG
CATGGGCTTTAACGACGACTACGAGGTTGTACCTGGTCATAGCAGTCTCC
TGTTTGTCACGCCCTTGCGGAGCCTTCTTGGTCCCATCTCCGGCCGGCAG
CACCAAGTTGCAGTTGACTCATGACACAGCGAGCGGACGTTCGCGTTGCC
GTCGTCCATGCAGTGCAACGAGGGAGGAAGCAACAGCGGCAGCGAGACAG
GGCCGCAGCAACGTTGGGGAAGAGACGGAGCTGCGGCTGATGACTTGGAT
GGAGGTGGAAGCCCGCGTCAAACGAGATACTGCCGAGGTAGGGCAGTTGT
ATCTGTTTTAGTCAAAGCAGCATCCAACAGAGATGAAGGCAGCAGGTCAC
AGCTGCAGCAGTAAAAATGTACACCAGAAGATACTAACTGATTGCTCGTC
ACCATCAGTGATCACGTTGTGTTATTCTGCTGCACATGCGTGCGCGTCGG
TGCTTTCCGGTAATTGACTTCAGTGACTTAGACGCCGCGGTACCATCGGC
AGCAGCATCTGCTTCGCCTGGGGTGTTCTTGGCAAGACAATGCGGAGATC
TGAGAGATGCAACCCACCAGACCACCATGGTACCGAGCTTGTTCCGTTCG
CTGCCGTACCCAATTCACATGTAAAGGAAAAGCAGACTCTTCTGTGCAGC
CTTCGTCCTGTGTGACCCCGGCCGGTACACCCAAAAACGCACCGAAAACA
ATGGACACAAACGCGCCCTAGATGTAGGCATACATATTACGCCAGGGTGC
GGGTTTCACAAAGCACGACGCGCACGCTACTGCTGTATCTCTCCGATGAC
TGTCTGTTCTTAGCGTTGTGGTAAGATGGTTGTAATTATCTCACGCGGTT
TGCTATTGTTGGTGTTGGTATTGGTGGTGCTGATGCTGGTGCTGGTGCTG
GTGTGGTATTCTTCGCAAAAACACAGCATTTTCCGACCTCCACCTCCGTT
CCCATACTCCTCAACGCTGGTGCTCCTGGTTCCTTCTCTCCTTCCTCCTT
CTGCACCGTTTCGTGTTTCCCACGAACCCTCCCCGCGGATCGGGGGTAAA
CACAGACTGGCAAGGCCGCCGTGATCGTTCCCGTCGGCGCCACGGAGCAG
CACGGGCCGAACGGGCTCATTGGGACCGATCACATGACCGCCGAGGTGAT
GCGCAAAGACTTCGGGGGCATCGTACGTTACTTTTTAAGTGTCGAACCGA
CCTTCTAGTTTCGCCGAACTCTGTGCCATGGTATCTCGCATCGTTTTGTT
TTGACGAGGCTCCTATCGTCTGGACGGGGAAGGGTTTTCTCCTGCGCGAC
AACTGCTGTCGCTTCATCGACGAGACGAGTTCTCAACACCACATGCTTGA
GCCTCGTCCCCAGCAGTGTATACACCAACACAAATTTAATCGTGTCCAGC
CCGGCACCAACGTGTGTTCCCCCCGGCCCACCCCCCTCCCCCCTTCATGC
ACGCCCTCGTTTCAAACCAATTTTCACATCATCCTTATCGCCGCCGGTGT
TGAAACAAAATATGCTAATTAGGCCGTCGCCCGCGGTGTCTGCGAGGTTA
CCGGCGCTATCCTCGCCCCTACCATCAACTACGGCATGTCCCACCACCAC
GAGTCCTTCCCGGGGACGGTGACCCTGAGGCCGGCGACGTTCGTGGCGGT
GGTGCGGGACGTGGCGGCTTCCCTCTCGGGGGCCGGCTTCACGCACGTGT
TGTTCGTCAACGGTAGGTCGAGGGGTCAGCCGTACCGCCTTGTCTTTGGG
CGGTGTCTGGGTCAATGGTGCCTCCTCTTCGCACGGCCAAGCCAGTGTTC
CACGATGCGCGTGTGCGTGTTGTATGCGTGGGGGTTGAGCAGGCTTGGTA
CATGGCGTTGGTCTCGGGCGTTGGGGCGGTCGGTTGGTTCAGGCACACAT
GACGTGTCACGCAGTGGTGTCTCGAATTCTGAACACACTTGTTTCTTTCC
CAGCTTCGGCCCCCTCTTCTTTGCGTGATCCGACCAACAGCACCATCAAA
GAGCAACCACCTTCTCCTTCTCCTAACGAATCCGACACAACAGGCCACGG
CGGCAACGTCGGCCCCGCCTTCAAAGCATTCGCAGACTTTGCAGCAGAAC
AACAGCAAGCCCGAGAAATGGAGGAAGAAGAAGCAGAAAGTAGTGGCGGC
GGTGGCGGCGGGGACGGTGACAGCACAGCCCGGGTAAAGCTGATCAGCTG
GTACGCGGGACGTGAGTCCTCGACTCTTGCCAAGGAGCTGTACGGGGGCG
AGGTCGGGCAGCACGCGACGCCGGACGAGGTGTGAACAAAGGAAAATTTC
AAGAAAATATCAGCTGCTACACTGGGCACACGGCTCGCCGTAGACTCCGA
ATCCTCAATTCGCCTGGCGTTGTACAACGTCCCCCTGTACGGTAAAGCAA
GTCGTTGTGATTGGGCTAGCATCGTCGTCTCCTGTGCTCCCATGACTTTG
TTCTCGACAGGTCCTTCTCTTTTTTTCTCTCCTCGCACTCGCGCTTCTTC
CTTCTCCTCTTCGCTGCCTTTTCCCTGGCTGTCTTTTTTTCTCTCCAGCT
TTACGGTACTGAGGGGAGACCGGGACGTTCATGAAATGCGAAGGCTACAC
CAATATCTTCCTCCTGTTGTGTGCATCTGTTCCCCGCTGCTACCTGCTAC
CTGCCTGCCTGTTCCTGTTTCTTCCCATTCGCTCGTCTTAGGTTGCGGTG
ACCCAGCACCTATTCCCGGAGTCTGTGAAATATGGGGTCGAGCTAGACCC
AGCCGCAATCCAGGTGAGCAACAAAATCGTCAGAAGAGTGCCTGCTCTCA
CCCAGTTTTTGTACGTTTGTTCGTTTCTACGTCACGCAAGAGCAGTCGTA
TGTTGACGACTGTGCAAAAGAACGACAGCAGCAGCAATGACAGGGCTTGG
TACCAGGGACAAACGCTGGCACTGGCATGGTTGTCTTCCGTTCGCAAAGG
TGTCATGAGGAACATCTTCTGTCACGTGGAGGAGAAAATAGCCCCGTGGG
AGGCGTGAAGAATCCATGGGTCGAAGGACGGGGGCGAGGCCGCTTGAAGA
CTGCACTCCGTACAGAGTGAAAACCGCCACAACGATGAAAATGAACAACA
AGTGCACAAAGTACACGCGTCATCAACGAAAATCGTGTGTCATCACCACC
ACCCCAGGTGGCGAAAGACCTCGGGGGCATGACGAAGCGGATCAGGGACG
CGGAGACGGGGCTCTCCGTCATGGACGTCCAGGACTTCCGCCGCCGCTTC
CCCGACGGCCGCATGTTCAGCAACCCGGCCCTGGCCACCCCGGAGCACGG
CCGACGCCTCCTCGAGGCCGCGGTCAGAGACGCCACGGACGCGCTGGGCA
AGTTCTTGTCCGGGCAGGACGTTGTGGAGGAGGCGGAGGCGAAGGCCAAG
CGGGCGGCCGCTATGGCAGCAGCAGCAGCAGCGGCGGAGGCGGCGGCGGC
GACGGAGGGGAAGACGAAGGCGGGCAAGACATCGTTCACGCCGCGTGCGC
GGTGGGGCAACGACGATGACACCAGCAGCGGTAGTGATGGTAGTGGACGC
AGCGGTCGAGGCCGGGGACGAAGACGTGGCGGCGAGGGTAGCAGCAGCGG
CGGCAACGGCGGCGGCGCACAGCATGCAGTAG
back to top

Coding sequence (CDS) from alignment at Scaffold_189:42553..46234-

>EsuBft1112_8a-0001 ID=EsuBft1112_8a-0001|Name=EsuBft1112_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1356bp|location=Sequence derived from alignment at Scaffold_189:42553..46234- (Ectocarpus subulatus male Bft15b)
ATGGTGGTGACACGAACACCAGGAGCAGCAGCCAGTCATCGGCTGGCATG
GGCTTTAACGACGACTACGAGGTTGTACCTGGTCATAGCAGTCTCCTGTT
TGTCACGCCCTTGCGGAGCCTTCTTGGTCCCATCTCCGGCCGGCAGCACC
AAGTTGCAGTTGACTCATGACACAGCGAGCGGACGTTCGCGTTGCCGTCG
TCCATGCAGTGCAACGAGGGAGGAAGCAACAGCGGCAGCGAGACAGGGCC
GCAGCAACGTTGGGGAAGAGACGGAGCTGCGGCTGATGACTTGGATGGAG
GTGGAAGCCCGCGTCAAACGAGATACTGCCGAGACTGGCAAGGCCGCCGT
GATCGTTCCCGTCGGCGCCACGGAGCAGCACGGGCCGAACGGGCTCATTG
GGACCGATCACATGACCGCCGAGGCCGTCGCCCGCGGTGTCTGCGAGGTT
ACCGGCGCTATCCTCGCCCCTACCATCAACTACGGCATGTCCCACCACCA
CGAGTCCTTCCCGGGGACGGTGACCCTGAGGCCGGCGACGTTCGTGGCGG
TGGTGCGGGACGTGGCGGCTTCCCTCTCGGGGGCCGGCTTCACGCACGTG
TTGTTCGTCAACGGCCACGGCGGCAACGTCGGCCCCGCCTTCAAAGCATT
CGCAGACTTTGCAGCAGAACAACAGCAAGCCCGAGAAATGGAGGAAGAAG
AAGCAGAAAGTAGTGGCGGCGGTGGCGGCGGGGACGGTGACAGCACAGCC
CGGGTAAAGCTGATCAGCTGGTACGCGGGACGTGAGTCCTCGACTCTTGC
CAAGGAGCTGTACGGGGGCGAGGTCGGGCAGCACGCGACGCCGGACGAGG
TTGCGGTGACCCAGCACCTATTCCCGGAGTCTGTGAAATATGGGGTCGAG
CTAGACCCAGCCGCAATCCAGGTGGCGAAAGACCTCGGGGGCATGACGAA
GCGGATCAGGGACGCGGAGACGGGGCTCTCCGTCATGGACGTCCAGGACT
TCCGCCGCCGCTTCCCCGACGGCCGCATGTTCAGCAACCCGGCCCTGGCC
ACCCCGGAGCACGGCCGACGCCTCCTCGAGGCCGCGGTCAGAGACGCCAC
GGACGCGCTGGGCAAGTTCTTGTCCGGGCAGGACGTTGTGGAGGAGGCGG
AGGCGAAGGCCAAGCGGGCGGCCGCTATGGCAGCAGCAGCAGCAGCGGCG
GAGGCGGCGGCGGCGACGGAGGGGAAGACGAAGGCGGGCAAGACATCGTT
CACGCCGCTGATGGTAGTGGACGCAGCGGTCGAGGCCGGGGACGAAGACG
TGGCGGCGAGGGTAGCAGCAGCGGCGGCAACGGCGGCGGCGCACAGCATG
CAGTAG
back to top